Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0957
         (502 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    44   0.002
UniRef50_Q240M6 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q553T2 Cluster: Putative uncharacterized protein; n=1; ...    32   6.3  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 44.0 bits (99), Expect = 0.002
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = -1

Query: 496 FLLL*CVDELTAHLVLSGYWSP 431
           FLLL  VDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q240M6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 207

 Score = 32.7 bits (71), Expect = 4.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 262 NSKCQCQIFRSLYVLELSTLYEVYSKMPMQQNRRL 158
           N++ QC++F SL V++  T   V+   PMQ   R+
Sbjct: 77  NNREQCEVFESLEVIDSDTKVTVFKLKPMQDGHRI 111


>UniRef50_Q553T2 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 695

 Score = 32.3 bits (70), Expect = 6.3
 Identities = 18/39 (46%), Positives = 24/39 (61%)
 Frame = -2

Query: 429 RHLQRKYATQLEI*LLRSQQRLLHPSNRNSLLLHGRNEQ 313
           R L+R +   LE+  + S  RLL  S +NSLLLHG+  Q
Sbjct: 48  RILERFHQALLEMDSVESATRLLKYSQKNSLLLHGKPVQ 86


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,333,539
Number of Sequences: 1657284
Number of extensions: 9563844
Number of successful extensions: 18986
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18985
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)