Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0957
         (502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    25   0.50 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    25   0.50 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    25   0.50 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    25   0.50 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    25   0.50 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           25   0.50 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    25   0.50 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.6  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.2  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.2  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.2  

>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 391 ITSKVSTTAAPPFKPKLITASRS 323
           +TS +S + +PP KP   TAS++
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQN 165


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 391 ITSKVSTTAAPPFKPKLITASRS 323
           +TS +S + +PP KP   TAS++
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQN 165


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 391 ITSKVSTTAAPPFKPKLITASRS 323
           +TS +S + +PP KP   TAS++
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQN 165


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 391 ITSKVSTTAAPPFKPKLITASRS 323
           +TS +S + +PP KP   TAS++
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQN 165


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 391 ITSKVSTTAAPPFKPKLITASRS 323
           +TS +S + +PP KP   TAS++
Sbjct: 99  LTSPLSVSTSPPGKPATSTASQN 121


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 391 ITSKVSTTAAPPFKPKLITASRS 323
           +TS +S + +PP KP   TAS++
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQN 165


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.6 bits (51), Expect = 0.50
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 391 ITSKVSTTAAPPFKPKLITASRS 323
           +TS +S + +PP KP   TAS++
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQN 165


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -1

Query: 406  HPT*DITSKVSTTAAPPFKPKLITASR 326
            HP    T   STT   P KP   T SR
Sbjct: 2285 HPDASSTMAPSTTPMVPDKPVTTTTSR 2311


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -2

Query: 168 IDDCLYICNLHYNCTVRELIIG 103
           I + LYICN  YN      I G
Sbjct: 280 IVNVLYICNQCYNTVEESRIFG 301


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +3

Query: 243 WHWHLEF 263
           WHWHL +
Sbjct: 208 WHWHLVY 214


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +3

Query: 243 WHWHLEF 263
           WHWHL +
Sbjct: 208 WHWHLVY 214


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 70  FILKYVNNANDRLQLCRQTLVPN 2
           F+LK++     +LQLC Q LV N
Sbjct: 601 FLLKHIV---PKLQLCMQNLVIN 620


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 446 WLLEPIDIYNANTPPNLRY 390
           WL  P  + N  TP +LR+
Sbjct: 7   WLTPPHSLGNTVTPVSLRF 25


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 424 MSMGSNNHLTPGG 462
           +S G+NN+ TPGG
Sbjct: 185 VSGGNNNNGTPGG 197


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,913
Number of Sequences: 336
Number of extensions: 2604
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11839801
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)