Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0957
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745211-1|AAU93478.1|   86|Anopheles gambiae cytochrome P450 pr...    25   1.1  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.7  

>AY745211-1|AAU93478.1|   86|Anopheles gambiae cytochrome P450
           protein.
          Length = 86

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -3

Query: 368 GCSTLQTETHYCFTVEMSRVVIP-TRADSHEVLPPVKF*MPVPNFPFALC 222
           G    Q + HY  ++ +++  +    AD  + + P+   + VP+ P  LC
Sbjct: 36  GQKIAQLQMHYLLSMILTKFELTLAEADQQDAIKPILKMITVPSAPVKLC 85


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 120 ELCNYNVGYRCINNRLFCCIGILEYT-SYNVDNS 218
           ELCN+N  Y C   +  C +G +  T   N+ NS
Sbjct: 479 ELCNFNGDYVC--GQCQCYVGWIGKTCECNLQNS 510


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,148
Number of Sequences: 2352
Number of extensions: 10649
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)