Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0957
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.5  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   7.2  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   7.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.2  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   9.5  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   9.5  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   9.5  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   9.5  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   9.5  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   9.5  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   9.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   9.5  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.5  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   9.5  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   9.5  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +3

Query: 243 WHWHLEFYWW*DLM*IRTGRYHHPAHFDREAVMS 344
           WHWHL + +  D+  +   R     ++  + +M+
Sbjct: 210 WHWHLVYPFEGDIRIVNKDRRGELFYYMHQQIMA 243


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 101  THTSIDPKEHVYIEI 57
            +H++ DP+ H+Y E+
Sbjct: 1678 SHSTWDPRRHMYEEL 1692


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 82  GSIDVCVTDNKFTNC 126
           G  D C   NK+T+C
Sbjct: 121 GETDECNIGNKYTDC 135


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 82  GSIDVCVTDNKFTNC 126
           G  D C   NK+T+C
Sbjct: 121 GETDECNIGNKYTDC 135


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 161  SSILLHWHLG 190
            SSILLHW  G
Sbjct: 1418 SSILLHWKSG 1427


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 161  SSILLHWHLG 190
            SSILLHW  G
Sbjct: 1414 SSILLHWKSG 1423


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 134 PPDMYRLRPPPNPRF 148


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 134 PPDMYRLRPPPNPRF 148


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 383 PPDMYRLRPPPNPRF 397


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 382 PPDMYRLRPPPNPRF 396


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 367 PPDMYRLRPPPNPRF 381


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -3

Query: 434 PIDIYNANTPPNLRY 390
           P D+Y    PPN R+
Sbjct: 383 PPDMYRLRPPPNPRF 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,858
Number of Sequences: 438
Number of extensions: 3388
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)