Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0955
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46934-4|CAA87042.3|  519|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical...    28   5.6  
AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical ...    28   5.6  
U64600-1|AAK39203.1|  500|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z48717-3|CAA88606.1|  520|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF026215-1|AAB71319.1|  352|Caenorhabditis elegans Serpentine re...    27   9.8  

>Z46934-4|CAA87042.3|  519|Caenorhabditis elegans Hypothetical
           protein ZK1320.4 protein.
          Length = 519

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 373 IREAKTLYPFLRKLRGRRCMKFPTLVGNIEKE 278
           I+E   LYP       RRCM+  T +GN+E E
Sbjct: 380 IKETLRLYPLGTMANSRRCMR-ATKLGNVEVE 410


>AL031627-19|CAA20969.1|  349|Caenorhabditis elegans Hypothetical
           protein Y102A5C.31 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +1

Query: 370 VYNNI*ILFSFANRTASMSVVLLIHSPSQAA 462
           +YNNI + F   +  AS SV+L++H P + A
Sbjct: 273 MYNNIALNFIAMHGVASSSVMLIVHKPYRDA 303


>AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical
           protein K08D9.6 protein.
          Length = 530

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = +1

Query: 316 YTSVRAIFVKMD--TKFLLHVYNN-I*ILFSFANRTASMSVVLLIHSPSQAATWRVRARQ 486
           YT+V A    +D  +KF + +  N + I F  A  TA   V++ I     A  W++   Q
Sbjct: 148 YTTVMAKTTTIDNLSKFEMEISGNTVEIPFKMARYTAPKPVIICISPQFVAEQWQIFMMQ 207

Query: 487 MH 492
           +H
Sbjct: 208 VH 209


>U64600-1|AAK39203.1|  500|Caenorhabditis elegans Hypothetical
           protein C33D12.2 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +2

Query: 215 TNTSNNMYLLCIIKKKY*HSSLLLYI-PYKCGKFHTPPSAQFS*KWIQSFCFTYIIIYRS 391
           T  S + + LC+ +K Y +   ++   P+       PP  ++  KW+   C   ++ +  
Sbjct: 97  TTESKDSFKLCVSEKFYANPQFVIVEDPFTMVTTEIPPVDEYMPKWLSWICLLILLCFSG 156

Query: 392 SF 397
            F
Sbjct: 157 LF 158


>Z48717-3|CAA88606.1|  520|Caenorhabditis elegans Hypothetical
           protein T10B9.5 protein.
          Length = 520

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 373 IREAKTLYPFLRKLRGRRCMKFPTLVG 293
           I+E   LYP    +  R+CMK  T++G
Sbjct: 380 IKETLRLYPLASIVHNRKCMKSTTVLG 406


>AF026215-1|AAB71319.1|  352|Caenorhabditis elegans Serpentine
           receptor, class h protein83 protein.
          Length = 352

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 322 SVRAIFVKMDTKFLLHVYNNI*ILFSFANRTASMSVVLLIHSP 450
           +V  IF+ +  KF      N+ IL +  +   S  +VLLIH+P
Sbjct: 267 TVLYIFLSLSYKFYNQALTNLSILHASLHDLLSTFMVLLIHAP 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,094,525
Number of Sequences: 27780
Number of extensions: 272620
Number of successful extensions: 676
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)