Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0954
         (383 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0333 - 12541946-12542029,12544231-12544278,12545053-125451...    30   0.72 
09_04_0519 - 18276797-18276874,18277214-18277419,18277527-182776...    27   6.7  

>05_03_0333 -
           12541946-12542029,12544231-12544278,12545053-12545158,
           12546943-12547046,12547127-12547264,12547395-12547799
          Length = 294

 Score = 29.9 bits (64), Expect = 0.72
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -3

Query: 135 RTHSCFEQKKILQKKKNNTP-LHFTALAQNKFE 40
           R H CF+  K L+   N  P LH+  L   KFE
Sbjct: 98  RVHLCFKSSKSLKCNLNQVPVLHYLCLDDQKFE 130


>09_04_0519 -
          18276797-18276874,18277214-18277419,18277527-18277683,
          18278069-18278454,18279291-18279317,18279609-18279720
          Length = 321

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 1  LTERDCSTEKYKKFKFILCQCCEVK 75
          + ERDCS E  K  + + C C  +K
Sbjct: 6  MKERDCSDESKKAGEMLACSCKMIK 30


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,170,906
Number of Sequences: 37544
Number of extensions: 109529
Number of successful extensions: 171
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)