Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0954
         (383 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060997-1|AAL28545.1|  619|Drosophila melanogaster HL01392p pro...    27   8.4  
AE014297-1191|AAF54549.3|  619|Drosophila melanogaster CG6544-PA...    27   8.4  

>AY060997-1|AAL28545.1|  619|Drosophila melanogaster HL01392p
           protein.
          Length = 619

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 236 RKLYGTARIVSSTLLTCVSPAPVV 165
           R++YG  R+V+S +    SPA VV
Sbjct: 50  RRVYGATRVVTSPIRVVTSPARVV 73


>AE014297-1191|AAF54549.3|  619|Drosophila melanogaster CG6544-PA,
           isoform A protein.
          Length = 619

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 236 RKLYGTARIVSSTLLTCVSPAPVV 165
           R++YG  R+V+S +    SPA VV
Sbjct: 50  RRVYGATRVVTSPIRVVTSPARVV 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,804,151
Number of Sequences: 53049
Number of extensions: 191875
Number of successful extensions: 402
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)