Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0953
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.2  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.2  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   1.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.7  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   8.3  

>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 515 NAKRRGVNYLET*SIEMKRQFHRN 586
           N KR    Y  +  +E++R+FHR+
Sbjct: 84  NGKRARTAYTSSQLVELEREFHRS 107


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 515 NAKRRGVNYLET*SIEMKRQFHRN 586
           N KR    Y  +  +E++R+FHR+
Sbjct: 104 NGKRARTAYTSSQLVELEREFHRS 127


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 331 F*IKIKICINFVNSSQNIGKLKTKLKLNYALL 426
           F IKI + +NF  S+  I  L  K KL  + L
Sbjct: 247 FVIKILVALNFFTSTLEIDNLYLKHKLEISSL 278


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 568 FHFYTSCFKVIYTSPFRIKSLKFYKNI 488
           F    SC  VI+   F +K ++ +KNI
Sbjct: 95  FSSLLSCCSVIFGCIFALKVIEVFKNI 121


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 568 FHFYTSCFKVIYTSPFRIKSLKFYKNI 488
           F    SC  VI+   F +K ++ +KNI
Sbjct: 95  FSSLLSCCSVIFGCIFALKVIEVFKNI 121


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 754 FGKCYVPVNLFYITIFVSSIKY 689
           F K ++PV + Y+ IFV  I +
Sbjct: 169 FFKRFLPVYVSYLLIFVQQIPF 190


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 252 TWRNIFNINHIFATFFILFFTSYIICLL 335
           T ++ FN++  F    I   T+Y++ L+
Sbjct: 343 TAKDFFNLDWTFCHMMIAALTTYLVILI 370


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 539 NLHLAFSH*KFKILQKYLKL 480
           N  LA  + +FK LQKYLK+
Sbjct: 181 NYALALKN-RFKELQKYLKI 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,227
Number of Sequences: 336
Number of extensions: 3308
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)