Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0953
         (776 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0950 - 21049767-21050450                                         29   4.1  
06_03_1196 + 28316186-28316290,28317529-28317633,28317725-283177...    28   9.5  

>04_03_0950 - 21049767-21050450
          Length = 227

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
 Frame = -1

Query: 653 YDPPDGEWL----PSLINVNNARFSLGSY 579
           +DPPD +W+    P L+N+ + RF +  +
Sbjct: 191 FDPPDEDWVLLQGPQLVNIGSGRFCIARF 219


>06_03_1196 +
           28316186-28316290,28317529-28317633,28317725-28317796,
           28318023-28318259,28318608-28318718,28318810-28318923,
           28319272-28319373,28320238-28320306,28320447-28320553,
           28321128-28321224,28321347-28321466,28321663-28321847,
           28322065-28322353
          Length = 570

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 562 FYTSCFKVIYTSPFRIKSLKFYKNI 488
           FY SC  V+Y   FR++S+  Y N+
Sbjct: 368 FYASCQAVMYILCFRLRSIMDYPNL 392


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,275,710
Number of Sequences: 37544
Number of extensions: 265314
Number of successful extensions: 410
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)