Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0951
         (398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   0.77 
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   1.0  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   1.3  
AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    24   1.8  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   5.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   5.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   5.4  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 0.77
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +2

Query: 119 MDLDLKRPCNCQRARK 166
           +D+DL+  CNC++ +K
Sbjct: 458 LDIDLRTSCNCEKNKK 473


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 25.0 bits (52), Expect = 1.0
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
 Frame = +2

Query: 86  TGGTSFGRHLVMDLDLKRPCNCQRARKRCHCFRPHSNEIWLFSRYSTGWKCGLHADFT-- 259
           TG +S G   ++++     C+    +  CHC R  S+ +  F  +  G+ C      T  
Sbjct: 8   TGQSSRG---LLEICFAGRCDLDNNKTNCHCARNLSHSLLSFGPF--GFSCSSAPTMTPP 62

Query: 260 --ELTACVGGELDRHE-GSAVHRRYFYITLLREP 352
             +     G E D  +  +AV  R  Y+T   EP
Sbjct: 63  SVQAEGLRGSETDGAKLTTAVGGRLSYLTRTDEP 96


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -2

Query: 235 LPAGGVSRKEPYFVAVRSKTMASFSRPLTVAR 140
           +PA GVS KE Y     +  +A F R + V R
Sbjct: 310 VPAPGVSFKEMYVKIRTNPRIADFQRQIGVGR 341


>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +2

Query: 188 HS-NEIWLFSRYSTGWKCGLHADFTELTACVGGELDRHEGS 307
           HS +++ LF    TG  CG H D  E+       L +  G+
Sbjct: 312 HSYSQLLLFPYGDTGAHCGNHQDLNEIAEATVKSLAKRYGT 352


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -1

Query: 344 SAVLCRSTSGGR--LSPRVGPIPLLRTPSAP*NQREDR 237
           +++L     GG+   SPR  P PL R  SA   Q++ +
Sbjct: 185 NSLLAAKVGGGQPSASPRQPPTPLPRRSSAQPQQQQQQ 222


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 323  TSGGRLSPRVGPIPLLRTPSAP*NQREDRTSSRW 222
            +SGGRLS   GP     T  AP   R    S  W
Sbjct: 1010 SSGGRLSSGGGPPVGTPTDGAPSEGRRLSHSKSW 1043


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -3

Query: 396 APRFT*RYSDKYLATGSLSSVM*KYLRWTAEPSCRSNSPPTH 271
           APR   + +D Y+  G    ++   L+W A+P   S    +H
Sbjct: 693 APRIEAK-NDAYIPKGGDKKIISTKLQWNAKPKIGSLDNASH 733


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,804
Number of Sequences: 2352
Number of extensions: 9034
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)