Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0951
(398 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY081844-1|AAL91661.1| 362|Caenorhabditis elegans heparan 6-O s... 150 3e-37
AC024755-9|AAF59640.2| 362|Caenorhabditis elegans Heparan sulph... 150 3e-37
Z93385-3|CAB07636.1| 250|Caenorhabditis elegans Hypothetical pr... 30 0.70
AF040650-4|AAB95009.2| 291|Caenorhabditis elegans Hypothetical ... 30 0.70
U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical pr... 27 6.5
U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical pr... 27 6.5
U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical ... 27 6.5
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 27 6.5
Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical pr... 26 8.7
>AY081844-1|AAL91661.1| 362|Caenorhabditis elegans heparan 6-O
sulfotransferase HST-6 protein.
Length = 362
Score = 150 bits (364), Expect = 3e-37
Identities = 71/136 (52%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Frame = +2
Query: 5 SYDEVLHDD---FRFDLNAHDVMVFLHIQKTGGTSFGRHLVMDLDLKRPCNCQRARKRCH 175
+Y++++ + RF+ ++DV+VF+HIQKT GT+F + LV PC CQ +KRC+
Sbjct: 59 NYEDIVQREDTALRFNKTSNDVIVFVHIQKTAGTTFEKFLVR-YQQNLPCKCQAHKKRCN 117
Query: 176 CFRPHSNEIWLFSRYSTGWKCGLHADFTEL--TACVGGELDRHEGSAVHRRYFYITLLRE 349
C R SNE WLFSRYSTGW CGLHADFTEL +CV LD+ G R YFY T LR
Sbjct: 118 CGRRSSNETWLFSRYSTGWVCGLHADFTELVVNSCVQKVLDKQAGHKKKRNYFYTTFLRN 177
Query: 350 PVARYLSEYRHVKRGA 397
P R++SE+RHV+RGA
Sbjct: 178 PTDRFISEFRHVQRGA 193
>AC024755-9|AAF59640.2| 362|Caenorhabditis elegans Heparan
sulphotransferase protein 6 protein.
Length = 362
Score = 150 bits (364), Expect = 3e-37
Identities = 71/136 (52%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Frame = +2
Query: 5 SYDEVLHDD---FRFDLNAHDVMVFLHIQKTGGTSFGRHLVMDLDLKRPCNCQRARKRCH 175
+Y++++ + RF+ ++DV+VF+HIQKT GT+F + LV PC CQ +KRC+
Sbjct: 59 NYEDIVQREDTALRFNKTSNDVIVFVHIQKTAGTTFEKFLVR-YQQNLPCKCQAHKKRCN 117
Query: 176 CFRPHSNEIWLFSRYSTGWKCGLHADFTEL--TACVGGELDRHEGSAVHRRYFYITLLRE 349
C R SNE WLFSRYSTGW CGLHADFTEL +CV LD+ G R YFY T LR
Sbjct: 118 CGRRSSNETWLFSRYSTGWVCGLHADFTELVVNSCVQKVLDKQAGHKKKRNYFYTTFLRN 177
Query: 350 PVARYLSEYRHVKRGA 397
P R++SE+RHV+RGA
Sbjct: 178 PTDRFISEFRHVQRGA 193
>Z93385-3|CAB07636.1| 250|Caenorhabditis elegans Hypothetical
protein M01E5.4 protein.
Length = 250
Score = 29.9 bits (64), Expect = 0.70
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +1
Query: 103 RKTPGYGPRSKEAVQLSTGAKKMPLFSTSQQRNMALFEILHRLEVRSSR 249
+KT G PR+ +A +L+ + FS SQ RN+ +F I +LE+R +R
Sbjct: 175 QKTIGV-PRNTQAARLAKSLSREHHFSDSQCRNLRIF-IEEQLELRFAR 221
>AF040650-4|AAB95009.2| 291|Caenorhabditis elegans Hypothetical
protein T04B8.3 protein.
Length = 291
Score = 29.9 bits (64), Expect = 0.70
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 113 LVMDLDLKRPCNCQRARKRCHCFRPHSNEIWLFSRYSTGWKC 238
L + +D KRP N + RC FR + + ++Y W C
Sbjct: 25 LTVSVDTKRPLNARSVMFRCRGFR--NRTVSFLNKYGIAWIC 64
>U40060-7|AAA81145.2| 391|Caenorhabditis elegans Hypothetical
protein F38B6.7 protein.
Length = 391
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/78 (21%), Positives = 34/78 (43%)
Frame = +2
Query: 101 FGRHLVMDLDLKRPCNCQRARKRCHCFRPHSNEIWLFSRYSTGWKCGLHADFTELTACVG 280
F R++ L ++ R +R + + + R+ W LHA++T T +G
Sbjct: 312 FFRNMNRVLTIQSDQTSSRQIRRLYIVLVFQTKNRISKRHPQVWN-DLHANYTTFTEFLG 370
Query: 281 GELDRHEGSAVHRRYFYI 334
E + G+ + Y+Y+
Sbjct: 371 TETGKQLGNPMAGTYYYV 388
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 136 EAVQLSTGAKKMPLFSTSQQRNMALFEILH 225
E +QL +KK+P RN+ALF LH
Sbjct: 30 EIIQLQEESKKIPYKMEIVWRNVALFAALH 59
>Z68320-4|CAA92705.4| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 2 LSYDEVLHDDFRFDLNAHDV-MVFLHI 79
+S+DE+LHDD F N + +FL +
Sbjct: 420 ISFDELLHDDSTFSCNGEFIFQLFLRV 446
>U97193-6|AAV34803.1| 780|Caenorhabditis elegans Hypothetical
protein C06A5.3a protein.
Length = 780
Score = 26.6 bits (56), Expect = 6.5
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 37 VRPQRSRCHGLLAHTENRWHIVRKT--PGYG-PRSKEAVQLSTGAKKMPLFSTSQQRNMA 207
VRPQ C G +RW V K YG RS E + +TG KKM F + + M
Sbjct: 507 VRPQM--CGG----NRHRWRCVDKKCRKWYGWVRSHEEIPKNTGRKKMTTFKSPITKPMK 560
Query: 208 LFE 216
L +
Sbjct: 561 LMK 563
>U97193-5|AAV34804.1| 783|Caenorhabditis elegans Hypothetical
protein C06A5.3b protein.
Length = 783
Score = 26.6 bits (56), Expect = 6.5
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 37 VRPQRSRCHGLLAHTENRWHIVRKT--PGYG-PRSKEAVQLSTGAKKMPLFSTSQQRNMA 207
VRPQ C G +RW V K YG RS E + +TG KKM F + + M
Sbjct: 510 VRPQM--CGG----NRHRWRCVDKKCRKWYGWVRSHEEIPKNTGRKKMTTFKSPITKPMK 563
Query: 208 LFE 216
L +
Sbjct: 564 LMK 566
>AL008881-4|CAH10844.2| 448|Caenorhabditis elegans Hypothetical
protein W07A12.4 protein.
Length = 448
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 2 LSYDEVLHDDFRFDLNAHDV-MVFLHI 79
+S+DE+LHDD F N + +FL +
Sbjct: 420 ISFDELLHDDSTFSCNGEFIFQLFLRV 446
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 136 EAVQLSTGAKKMPLFSTSQQRNMALFEILH 225
E +QL +KK+P RN+ALF LH
Sbjct: 30 EIIQLQEESKKIPYKMEIVWRNVALFAALH 59
>Z83232-4|CAB05756.2| 891|Caenorhabditis elegans Hypothetical
protein K04B12.3 protein.
Length = 891
Score = 26.2 bits (55), Expect = 8.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 95 TSFGRHLVMDLDLKRPCNCQR 157
+S G L DL ++RPC C++
Sbjct: 774 SSLGNVLQADLPIRRPCTCRK 794
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,552,181
Number of Sequences: 27780
Number of extensions: 197068
Number of successful extensions: 545
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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