Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0951
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    21   3.9  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   3.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   6.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.9  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   6.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    20   9.1  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +2

Query: 137 RPCNCQRARKRCHCFRPH 190
           R  NC  A K CH  + H
Sbjct: 46  RCANCTYATKYCHSLKLH 63


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 335 LCRSTSGGRLSPRVGPIPLLR 273
           LC  T GG++ PR     LLR
Sbjct: 272 LCIQTIGGQIKPRKHEQRLLR 292


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 88  RWHIVRKTPGYGPRSKEAVQLSTGAKKMPLFSTS 189
           RW   + T   G RS E++      +  P FS+S
Sbjct: 45  RWKQYQDTLYSGTRSSESLTAQAHHRLYPAFSSS 78


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 85  FLYVQEDHDI 56
           F YVQED D+
Sbjct: 381 FFYVQEDDDV 390


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 90  VAHRSEDTWLWT 125
           VA+ + + WLWT
Sbjct: 64  VAYNNVNNWLWT 75


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +1

Query: 112 PGYGPRSKEAVQLSTGAKKMPLFSTSQQRNMA 207
           PG  PR ++  Q   G    PL   SQQ+  A
Sbjct: 219 PGMHPRQQQQAQQHQGVVTSPL---SQQQQAA 247


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 52  SVEVEPKVVMQH 17
           S E EP V++QH
Sbjct: 655 SAEAEPAVIVQH 666


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 290 PIPLLRTPS 264
           P+PL RTPS
Sbjct: 564 PLPLARTPS 572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,799
Number of Sequences: 438
Number of extensions: 2739
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)