Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0949
(557 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 297 5e-82
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 163 1e-41
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 148 5e-37
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 107 8e-25
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 93 3e-20
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 88 9e-19
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 84 2e-17
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 46 3e-06
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 31 0.087
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 31 0.11
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.11
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.27
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 0.81
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 1.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 2.5
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 4.3
SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces p... 22 7.4
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 25 7.5
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 10.0
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 297 bits (730), Expect = 5e-82
Identities = 137/154 (88%), Positives = 143/154 (92%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 275
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQ 455
RGILTLKYPIEHGIV NWDDMEKIWHHT YNELRVAPEEHP LLTEA LNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 456 IMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
I+FET N PA YV I AVLSLYA GRTTGIVLDS
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDS 155
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 163 bits (397), Expect = 1e-41
Identities = 77/148 (52%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 294 KYPIEHGIVTNWDDMEKIWHHTXYN-ELRVAPEEHPVLLTEASLNPKANREKMTQIMFET 470
+ PIE GI+ NW DME+IW + + +L PEEHP+LLTE L N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 471 LNTPAMYVVI*AVLSLYAFGRTTGIVLD 554
LN PA+ + VL+LYA RTTGIVL+
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLE 159
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 148 bits (359), Expect = 5e-37
Identities = 72/154 (46%), Positives = 105/154 (68%), Gaps = 2/154 (1%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 275
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQ 455
R +L +KYP+E+GI+ ++++M ++W +T + +L++ P +LLTE +NP ANREKM +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 456 IMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFE +YV I AVLSLYA G ++G+V+DS
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDS 155
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 107 bits (258), Expect = 8e-25
Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 24/161 (14%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 242
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 243 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPV 401
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 402 LLTEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYA 524
LLTE LNP NRE +IMFE+ N +Y+ + AVL+L A
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAA 167
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 92.7 bits (220), Expect = 3e-20
Identities = 52/152 (34%), Positives = 81/152 (53%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLD 554
MFE+L PA Y+ + +A G+ T ++D
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGKGTACLVD 152
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 87.8 bits (208), Expect = 9e-19
Identities = 47/154 (30%), Positives = 86/154 (55%), Gaps = 2/154 (1%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 279 GI--LTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMT 452
I + +K +GI+ +W+ W +L+V P E+ +++TE S NP++ R+++
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 453 QIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLD 554
+ FE L+ PA Y+ AV +A ++T +++D
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVD 155
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 83.8 bits (198), Expect = 2e-17
Identities = 48/150 (32%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82
Query: 294 -KYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFET 470
+ P E +++NWD ME++ +T + +L + EHP+ +TE NP R MT+++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYT-FLKLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 471 LNTPAMYVVI*AVLSLYAFGR--TTGIVLD 554
N P++ I + S Y + ++GIVL+
Sbjct: 142 YNAPSVAYGIDGLFSFYHNTKPSSSGIVLN 171
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 46.4 bits (105), Expect = 3e-06
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +3
Query: 300 PIEHGIVTNWDDMEKIWHHTXYNELRVAPEE----HPVLLTEASLNPKANREKMTQIMFE 467
PI+ G V +W+ ++ W H Y+ L P + +PV L + +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKHL-YSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 468 TLNTPAMYVVI*AVLSLYAFGRTTGIVLD 554
P + ++ LYA G G+V+D
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVID 200
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 31.5 bits (68), Expect = 0.087
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 4/122 (3%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 294 KYPIEH--GIVTNWDDMEKIWHHTXYNELRVAPE--EHPVLLTEASLNPKANREKMTQIM 461
++ H G + +W +W N + P ++ +LLT+ + Q++
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117
Query: 462 FE 467
FE
Sbjct: 118 FE 119
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.1 bits (67), Expect = 0.11
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 363 YNELRVAPEEHPVLLTE--ASLNPKANREKMTQIMFETLNTP 482
Y L E+HP+LLT+ A+L P+ + ++ +I ++ NTP
Sbjct: 1400 YRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 159 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 302
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.27
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 256 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 95
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 0.81
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 267 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 178
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 27.1 bits (57), Expect = 1.9
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = -1
Query: 296 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 117
F G +F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 2.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 259 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 143
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 296 FEGQDTSFALCLISYIRVLLSHTDHHA 216
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 485
Score = 21.8 bits (44), Expect(2) = 7.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 282 ILTLKYPIEHGIVTN 326
I+T YP HGIV+N
Sbjct: 125 IVTGLYPESHGIVSN 139
Score = 21.4 bits (43), Expect(2) = 7.4
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 321 TNWDDMEKIWHHTXYNELRVAPEEHP 398
T WD E IW + N +R A P
Sbjct: 162 TWWDKGEPIWVNAERNNVRSAVHMWP 187
>SPBC1683.09c |frp1||ferric-chelate reductase
Frp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 7.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 219 VMVGMGQKDSYVGDEAQSKRGILTLKYPI 305
+M+G +Y+G AQ KR +LT + I
Sbjct: 165 IMIGAIHGFAYIGLAAQGKRALLTARVTI 193
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 24.6 bits (51), Expect = 10.0
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Frame = +3
Query: 126 NGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG-----QKDSYVGDEAQSKR 278
N +GM + R F S VG + VG Q+DSY+ D++ S+R
Sbjct: 318 NATGMYGVSKGHSSSTRRPFFSDVGSSQPAEEFVGSSSSHGRQQDSYIADDSDSER 373
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,374,990
Number of Sequences: 5004
Number of extensions: 50143
Number of successful extensions: 146
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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