Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0949
(557 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 314 3e-86
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 310 7e-85
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 310 7e-85
SB_56| Best HMM Match : Actin (HMM E-Value=0) 308 2e-84
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 307 5e-84
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 5e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 1e-34
SB_54| Best HMM Match : Actin (HMM E-Value=0) 94 6e-20
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 83 2e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 75 3e-14
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 57 1e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 54 1e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 34 0.069
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.48
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.48
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.64
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.64
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 0.84
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 0.84
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 2.6
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 2.6
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 2.6
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 2.6
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 2.6
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 2.6
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 3.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_41338| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1) 27 7.9
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_21651| Best HMM Match : ETF_alpha (HMM E-Value=9.7) 27 7.9
SB_15033| Best HMM Match : Dynein_light (HMM E-Value=4) 27 7.9
SB_10353| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_8096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_5141| Best HMM Match : Synaptobrevin (HMM E-Value=0.0092) 27 7.9
SB_53169| Best HMM Match : DUF58 (HMM E-Value=3.2) 27 7.9
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 27 7.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 314 bits (771), Expect = 3e-86
Identities = 146/156 (93%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET N+PAMYV I AVLSLYA GRTTGIV+DS
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 156
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 310 bits (760), Expect = 7e-85
Identities = 145/156 (92%), Positives = 149/156 (95%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET N+PAMYV I AVLSLYA GRTTGIV+DS
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 156
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 310 bits (760), Expect = 7e-85
Identities = 143/156 (91%), Positives = 149/156 (95%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET N+PAMYV I AVLSLYA GRTTGIV+DS
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 156
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 308 bits (756), Expect = 2e-84
Identities = 144/154 (93%), Positives = 148/154 (96%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 275
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQ 455
RGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 456 IMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
IMFET N+PAMYV I AVLSLYA GRTTGIV+DS
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 155
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 307 bits (753), Expect = 5e-84
Identities = 143/154 (92%), Positives = 148/154 (96%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 275
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQ 455
RGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 456 IMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
IMFET N+PAMYV I AVLSLYA GRTTGIV+DS
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 155
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 180 bits (439), Expect = 5e-46
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 275
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHT 359
RGILTLKYPIEHGIVTNWDDMEKI T
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFET 89
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/41 (73%), Positives = 34/41 (82%)
Frame = +3
Query: 435 NREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
N + M +IMFET N+PAMYV I AVLSLYA GRTTGIV+DS
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS 118
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 142 bits (345), Expect = 1e-34
Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Frame = +3
Query: 108 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 281
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 282 ILTLKYPIEHGIVTNWDDMEKIWHHTX-YNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
+L + YP+++GIV NWDDM+ +W +T +++ + P VLLTE LNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFE +Y+ I AVL+LYA G TG+V+DS
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDS 159
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/71 (60%), Positives = 54/71 (76%)
Frame = +3
Query: 342 KIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLY 521
K+W H +++LRV E+ PVLLTEA LNPK NRE+M Q+MFE+ N P MYV + AV++LY
Sbjct: 2130 KMWEHA-FDQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 522 AFGRTTGIVLD 554
A GRTTG V D
Sbjct: 2189 ASGRTTGTVFD 2199
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +3
Query: 390 EHPVLLTEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
+HPVLLTEA LNP+ NREK ++ FET N PA+++ + AVLSLYA GRTTG+VLD+
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDA 181
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/86 (38%), Positives = 56/86 (65%)
Frame = +3
Query: 300 PIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETLNT 479
PI+ G++ +WD EKI + ++ HP+L++EA+ N + REK+T++MFE N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 480 PAMYVVI*AVLSLYAFGRTTGIVLDS 557
PA ++ +VL+ +A GR+ G+V+DS
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDS 88
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 84 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 254
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 255 GDEAQSKRGILTL 293
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/65 (41%), Positives = 36/65 (55%)
Frame = +3
Query: 228 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLL 407
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Query: 408 TEASL 422
+L
Sbjct: 337 AVLAL 341
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +3
Query: 456 IMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
IMFE N+PA+YV I AVLSLYA GRTTG+V DS
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDS 34
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +3
Query: 102 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 281
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 282 ILTLKY--PIEHGIVTNWDDMEKIWHHTXYNE 371
L Y P + G + NWD ++IW +T E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 212 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 96
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 34.3 bits (75), Expect = 0.069
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +3
Query: 372 LRVAPEEHPVLLTEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIV 548
L+V P +H V++T +E++ +I+ A+Y+ ++L++Y++ +GIV
Sbjct: 521 LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.48
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 158 CETGLAHT 135
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.64
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 158 CETGLAHT 135
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.64
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 158 CETGLAHT 135
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.64
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 158 CETGLAHT 135
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 0.84
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 158 CETGLAHT 135
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 0.84
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 158 CETGLAHT 135
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 0.84
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 158 CETGLAHT 135
CET L T
Sbjct: 212 CETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 269 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 291 LKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPE---EHPVLLTEASLNPKANRE 443
L+ P + +VT+++ E++ H ++ L + HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHA-FSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 222 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 280
Query: 158 CETGLAHT 135
CET L T
Sbjct: 281 CETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 158 CETGLAHT 135
CET L T
Sbjct: 142 CETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1621 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1679
Query: 158 CETGLAHT 135
CET L T
Sbjct: 1680 CETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 649 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 707
Query: 158 CETGLAHT 135
CET L T
Sbjct: 708 CETQLVLT 715
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 158 CETGLAHT 135
CET L T
Sbjct: 263 CETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1059 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1117
Query: 158 CETGLAHT 135
CET L T
Sbjct: 1118 CETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 158 CETGLAHT 135
CET L T
Sbjct: 61 CETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 335 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 159
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 158 CETGLAHT 135
CET L T
Sbjct: 142 CETQLVLT 149
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 3.4
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -1
Query: 275 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 111
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 110 GNFFVAHLE 84
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 187 GNTARGASSPAKPALHIPEPLSTT 116
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_41338| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 82 TRPHCTAESQTCSPSTKSI 100
>SB_40691| Best HMM Match : Peptidase_C27 (HMM E-Value=1.1)
Length = 406
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 161 TRPHCTAESQTCSPSTKSI 179
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 202 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 92
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_21651| Best HMM Match : ETF_alpha (HMM E-Value=9.7)
Length = 166
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 115 TRPHCTAESQTCSPSTKSI 133
>SB_15033| Best HMM Match : Dynein_light (HMM E-Value=4)
Length = 434
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 342 TRPHCTAESQTCSPSTKSI 360
>SB_10353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 82 TRPHCTAESQTCSPSTKSI 100
>SB_8096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 15 TRPHCTAESQTCSPSTKSI 33
>SB_5141| Best HMM Match : Synaptobrevin (HMM E-Value=0.0092)
Length = 604
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 388 TRPHCTAESQTCSPSTKSI 406
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 553 TRPHCTAESQTCSPSTKSI 571
>SB_53169| Best HMM Match : DUF58 (HMM E-Value=3.2)
Length = 254
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 475 TRPPCTSSSKPCSRCTRSV 531
TRP CT+ S+ CS T+S+
Sbjct: 203 TRPHCTAESQTCSPSTKSI 221
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -1
Query: 269 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 135
LC + ++LSH + H L +HG R +SCET L T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_30175| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -3
Query: 258 LLHKSPSVPYRPS--RPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPT 112
LL +S P +P+ RP GGA P++ ++ + N+ T+ PT
Sbjct: 92 LLDESTEAPPQPATIRPQGGALPQTPVKGKQNKRVSDNKEFTHAMQARRPT 142
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.5 bits (58), Expect = 7.9
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -3
Query: 264 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLRNRPCTYRSHCLLPTRQLLRR 94
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 27.5 bits (58), Expect = 7.9
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
Frame = +3
Query: 312 GIVTNWDDMEKIWHHT---XYNELR---VAPEEHPVLLTEASLNPKAN 437
G+V + + + K+WHHT ++ V EH LL + S+ P+ N
Sbjct: 426 GVVEHTEPLLKVWHHTQEVCVGHIQGGGVGVVEHTELLLKVSIVPRTN 473
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,167,355
Number of Sequences: 59808
Number of extensions: 452376
Number of successful extensions: 1320
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 1174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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