Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0949
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 317 3e-87
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 317 3e-87
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 317 3e-87
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 317 3e-87
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 317 3e-87
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 317 3e-87
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 316 5e-87
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 315 2e-86
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 307 3e-84
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 279 1e-75
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 224 3e-59
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 7e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 7e-48
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 186 7e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 2e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 8e-46
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 144 4e-35
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 116 2e-26
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 93 2e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 48 3e-06
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 34 0.060
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.11
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 33 0.18
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.3
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 5.2
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.2
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 6.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 6.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 6.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 6.9
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 6.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 317 bits (779), Expect = 3e-87
Identities = 148/156 (94%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTG+VLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDS 156
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 317 bits (779), Expect = 3e-87
Identities = 148/156 (94%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTG+VLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDS 156
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 317 bits (779), Expect = 3e-87
Identities = 148/156 (94%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTG+VLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDS 156
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 317 bits (779), Expect = 3e-87
Identities = 148/156 (94%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTG+VLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDS 156
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 317 bits (779), Expect = 3e-87
Identities = 148/156 (94%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTG+VLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDS 156
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 317 bits (779), Expect = 3e-87
Identities = 148/156 (94%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTG+VLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDS 156
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 316 bits (777), Expect = 5e-87
Identities = 148/156 (94%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 156
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 315 bits (773), Expect = 2e-86
Identities = 146/156 (93%), Positives = 150/156 (96%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
TQIMFET NTPAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 156
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 307 bits (754), Expect = 3e-84
Identities = 143/154 (92%), Positives = 148/154 (96%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 275
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQ 455
RGILTLKYPIEHGIVTNWDDMEKIWHHT YNELR+APEEHPVLLTEA LNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 456 IMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
IMFET NTPAMYV I AVLSLYA GRTTGIVLD+
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDT 155
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 279 bits (683), Expect = 1e-75
Identities = 130/138 (94%), Positives = 132/138 (95%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 323
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 324 NWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETLNTPAMYVVI* 503
NWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKMTQIMFET NTPAMYV I
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 504 AVLSLYAFGRTTGIVLDS 557
AVLSLYA GRTTG+VLDS
Sbjct: 125 AVLSLYASGRTTGVVLDS 142
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 224 bits (548), Expect = 3e-59
Identities = 105/112 (93%), Positives = 106/112 (94%)
Frame = +3
Query: 222 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPV 401
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHT YNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 402 LLTEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
LLTEA LNPKANREKMTQIMFET NTPAMYV I AVLSLYA GRTTG+VLDS
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDS 112
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 7e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKI 347
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 7e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKI 347
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 186 bits (454), Expect = 7e-48
Identities = 83/149 (55%), Positives = 112/149 (75%), Gaps = 1/149 (0%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 294 KYPIEHGIVTNWDDMEKIWHHT-XYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFET 470
+YP+EHGIV NW DMEKIW + ++L++ PEEHPVLLT+A LNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 471 LNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
N PA+Y+ + AVLSLYA GRTTG+VLDS
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDS 159
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 2e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKI 347
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 8e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDM 338
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 144 bits (349), Expect = 4e-35
Identities = 74/151 (49%), Positives = 100/151 (66%), Gaps = 3/151 (1%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 287
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 288 TLKYPIEHGIVTNWDDMEKIWHHTXYNE-LRVAPEEHPVLLTEASLNPKANREKMTQIMF 464
+ YP+++GIV NWDDM +W HT E L + P+E +LLTE LNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 465 ETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
E ++YV + AVL+LYA G TG+V+DS
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDS 159
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 116 bits (278), Expect = 2e-26
Identities = 69/177 (38%), Positives = 94/177 (53%), Gaps = 21/177 (11%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 233
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 234 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLT 410
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 411 EASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRT--------TGIVLDS 557
E LN NRE +IMFE+ N P +Y+ + AVL+L A + TG+V+DS
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDS 177
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 92.7 bits (220), Expect = 2e-19
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 17/170 (10%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 272
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 273 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLL 407
KR G + P ++ G++ +W+ EKI H+ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 408 TEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
+E+S N +A REK+T+IMFE PA Y+ VLS +A GRT G+++DS
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDS 178
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 48.4 bits (110), Expect = 3e-06
Identities = 32/121 (26%), Positives = 58/121 (47%)
Frame = +3
Query: 105 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 284
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 285 LTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMF 464
++ PIE G V NWD ++IW T + + V + LT+ + A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKT-FGSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 465 E 467
+
Sbjct: 116 D 116
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 48.4 bits (110), Expect = 3e-06
Identities = 32/121 (26%), Positives = 58/121 (47%)
Frame = +3
Query: 105 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 284
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 285 LTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMF 464
++ PIE G V NWD ++IW T + + V + LT+ + A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKT-FGSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 465 E 467
+
Sbjct: 116 D 116
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 37.1 bits (82), Expect = 0.009
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 2/149 (1%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 287
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 288 TLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFE 467
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 468 TLNTPAMYVVI*AVLSLYAFGRTTGIVLD 554
+ + + L LYA+ TTG+V+D
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVD 327
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 34.3 bits (75), Expect = 0.060
Identities = 29/83 (34%), Positives = 32/83 (38%)
Frame = +2
Query: 185 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLX 364
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 365 Q*AACCPRGTPSPAH*GFPQPQG 433
A P G P PA G P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.5 bits (73), Expect = 0.11
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = -2
Query: 391 SSGATRSSLXKV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITP* 212
SS SS V I + ++ T+ S PL++ +SS S TITP
Sbjct: 427 SSTLGSSSSTIVSTTITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPS 486
Query: 211 WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 95
+G+PT N S+P P + STT A +++S
Sbjct: 487 TQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 32.7 bits (71), Expect = 0.18
Identities = 28/79 (35%), Positives = 31/79 (39%)
Frame = +2
Query: 197 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLXQ*AA 376
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 377 CCPRGTPSPAH*GFPQPQG 433
P G P PA G P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 276 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 121
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -3
Query: 276 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 121
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 297 YPIEHGIVTN-WDDMEKIWHHTXYNELRVAPEEHP 398
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 297 YPIEHGIVTN-WDDMEKIWHHTXYNELRVAPEEHP 398
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQG 218
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 324 NWDDMEKIWHHTXYNE--LRVAPEEHPV 401
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 194 RGKAPPSGRDGRYGTEG 244
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 329 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 219
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,655,180
Number of Sequences: 27780
Number of extensions: 309956
Number of successful extensions: 1150
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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