Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0949
(557 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 293 7e-80
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 292 9e-80
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 292 9e-80
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 291 3e-79
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 290 5e-79
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 290 5e-79
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 286 8e-78
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 286 8e-78
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 286 8e-78
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 266 9e-72
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 212 2e-55
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 181 3e-46
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 153 1e-37
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 118 2e-27
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 107 4e-24
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 98 3e-21
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 81 5e-16
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 75 4e-14
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 62 2e-10
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 38 0.006
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 38 0.006
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.074
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 28 3.7
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 4.9
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 4.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 4.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 4.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 6.4
At3g05750.1 68416.m00646 expressed protein 27 6.4
At1g55420.1 68414.m06339 DC1 domain-containing protein contains ... 27 6.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 293 bits (718), Expect = 7e-80
Identities = 137/153 (89%), Positives = 142/153 (92%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHGIV+NWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET NTPAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 292 bits (717), Expect = 9e-80
Identities = 137/153 (89%), Positives = 141/153 (92%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHGIV NWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET NTPAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 292 bits (717), Expect = 9e-80
Identities = 137/153 (89%), Positives = 141/153 (92%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHGIV NWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET NTPAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 291 bits (713), Expect = 3e-79
Identities = 136/153 (88%), Positives = 141/153 (92%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHGIV+NWDDMEKIWHHT YNELRVAPEEHPVLLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET N PAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 290 bits (711), Expect = 5e-79
Identities = 135/153 (88%), Positives = 140/153 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHGIV NWDDMEKIWHHT YNELRVAPEEHP+LLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET N PAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 290 bits (711), Expect = 5e-79
Identities = 135/153 (88%), Positives = 140/153 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHGIV NWDDMEKIWHHT YNELRVAPEEHP+LLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET N PAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 286 bits (701), Expect = 8e-78
Identities = 130/153 (84%), Positives = 141/153 (92%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHG+V+NWDDMEKIWHHT YNELR+APEEHPVLLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET N+PAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 286 bits (701), Expect = 8e-78
Identities = 130/153 (84%), Positives = 141/153 (92%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHG+V+NWDDMEKIWHHT YNELR+APEEHPVLLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET N+PAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 286 bits (701), Expect = 8e-78
Identities = 130/153 (84%), Positives = 141/153 (92%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GILTLKYPIEHG+V+NWDDMEKIWHHT YNELR+APEEHPVLLTEA LNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFET N+PAMYV I AVLSLYA GRTTGIVLDS
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDS 157
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 266 bits (651), Expect = 9e-72
Identities = 119/153 (77%), Positives = 138/153 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 278
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 279 GILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQI 458
GIL+LKYPIEHG+V+NWDDMEKIWHHT YNELR+ PEEHP+LLTEA LNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 459 MFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
MFE+ P+MY+ I AVLSLY+ GRTTGIVLDS
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDS 158
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 212 bits (517), Expect = 2e-55
Identities = 99/147 (67%), Positives = 116/147 (78%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 294 KYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETL 473
K P+EHGIV NWDDMEKIWH+T YNELRV PEEHPVLLTEA NPKANREKMTQIMFE+
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 474 NTPAMYVVI*AVLSLYAFGRTTGIVLD 554
+ PAMYV + +VL LY+ GRTTG+VLD
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLD 145
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 181 bits (440), Expect = 3e-46
Identities = 81/112 (72%), Positives = 97/112 (86%)
Frame = +3
Query: 222 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPV 401
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HT Y+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 402 LLTEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
LLTEA LNPKA+REKMTQIMFET P+MY+ + A LSL+A GRTTG VLDS
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDS 112
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 153 bits (370), Expect = 1e-37
Identities = 71/150 (47%), Positives = 98/150 (65%), Gaps = 2/150 (1%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 287
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 288 TLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFE 467
+ YP+ +GIV NWDDME +W H YNEL++ P + +LLT+ LNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 468 TLNTPAMYVVI*AVLSLYAFGRTTGIVLDS 557
N +++ I AVL+LYA G TG+V+DS
Sbjct: 127 KYNFAGVFIQIQAVLTLYAQGLLTGLVIDS 156
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 118 bits (285), Expect = 2e-27
Identities = 68/174 (39%), Positives = 99/174 (56%), Gaps = 22/174 (12%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 248
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 249 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEE 392
YVG +A S +R + + PI+ GIV++WD ++ IW H + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 393 HPVLLTEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRTTGIVLD 554
HP+LL E LN + REK ++MFE PA+++ VL+ +A GR T +V+D
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVD 178
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 107 bits (258), Expect = 4e-24
Identities = 69/174 (39%), Positives = 96/174 (55%), Gaps = 26/174 (14%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 236
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 237 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLL 407
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 408 TEASLNPKANREKMTQIMFETLNTPAMYVVI*AVLSLYAFGRT-----TGIVLD 554
TE+ L P +RE +I+FET N P +Y+ + +VL+L A T TG+V+D
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVD 178
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 98.3 bits (234), Expect = 3e-21
Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 16/132 (12%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 233
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 234 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLT 410
G++ Y G +A + +R + + P + GIVT+WD ++ +W H N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 411 EASLNPKANREK 446
E LN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 81.0 bits (191), Expect = 5e-16
Identities = 58/150 (38%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 287
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 288 TLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAP-EEHPVLLTEASLNPKANREKMTQIMF 464
TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 465 ETLNTPAMYVVI*AVLSLYAFGRTTGIVLD 554
ET N Y AVLSLYA GR +G +D
Sbjct: 113 ETFNVSGFYASEQAVLSLYAVGRISGCTVD 142
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 74.5 bits (175), Expect = 4e-14
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 294 -----KYPIEHGIVTNWDDMEKIWHHTXYNELRV--APEEHPVLLTEASLNPKANREKMT 452
+ P + +V ++ ME I + ++ L + +HP+L+TE + NP +R KM
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYA-FDRLGANGSGIDHPILITECACNPVQSRSKMA 136
Query: 453 QIMFETLNTPAMYVVI*AVLSLYAFGRTTGI 545
+++FET PA+ + A S Y + + GI
Sbjct: 137 ELLFETYGVPAVAFGVDAAFS-YKYNQLHGI 166
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 62.1 bits (144), Expect = 2e-10
Identities = 35/127 (27%), Positives = 62/127 (48%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 294 KYPIEHGIVTNWDDMEKIWHHTXYNELRVAPEEHPVLLTEASLNPKANREKMTQIMFETL 473
+ PI+ G + N D +IW H + L +AP +LLTEA L+ + + +++FE
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 474 NTPAMYV 494
++Y+
Sbjct: 122 GFSSLYI 128
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 37.5 bits (83), Expect = 0.006
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Frame = +3
Query: 357 TXYNELRVAPEEHPVLLT------EASLNPKANREKMTQIMFETL---NTPAMYVVI*AV 509
T + ++V P P++++ + + + KA+R ++ +F L N PA+ V AV
Sbjct: 182 TIFTRMQVKPSMQPIVVSLPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAV 241
Query: 510 LSLYAFGRTTGIVLD 554
L+LYA RT+GIV++
Sbjct: 242 LALYAARRTSGIVVN 256
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 37.5 bits (83), Expect = 0.006
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Frame = +3
Query: 357 TXYNELRVAPEEHPVLLT------EASLNPKANREKMTQIMFETL---NTPAMYVVI*AV 509
T + ++V P P++++ + + + KA+R ++ +F L N PA+ V AV
Sbjct: 182 TIFTRMQVKPSMQPIVVSLPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAV 241
Query: 510 LSLYAFGRTTGIVLD 554
L+LYA RT+GIV++
Sbjct: 242 LALYAARRTSGIVVN 256
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.074
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 235 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 98
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 397 GCSSGATRSSLX-KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPT*ESF 239
GC G T++ L C+ +S+ + TIP + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -2
Query: 346 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 257
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 338 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 231
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 258 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAP 386
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 258 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTXYNELRVAP 386
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 211 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 89
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 6.4
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 275
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 276 RG--ILTLKYPIEHGIVTNWDDMEK 344
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At1g55420.1 68414.m06339 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 725
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -2
Query: 397 GCSSGATRSSLXK-V*CQIFSMSSQLVTIPCSMGYLRVRIPLLLC 266
GC S + S + + C+ F + + T+PC Y R PL LC
Sbjct: 529 GCGSDSCSSYFLECIKCKSF-LGIKCATLPCEAHYTHDRHPLTLC 572
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,995,466
Number of Sequences: 28952
Number of extensions: 294146
Number of successful extensions: 842
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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