Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0948
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.3  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   6.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.0  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +3

Query: 441 IIPVGYRPRSYQST*HRDQKC 503
           ++  G R +S++ T HRD++C
Sbjct: 557 VVDAGRRAKSFRRTNHRDKRC 577


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 630 YCV*RYFINR*IVYCYPETWI 568
           YC+  +F    IVYC P  W+
Sbjct: 161 YCIFSFFNT--IVYCIPAGWV 179


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 260 PPWHRATR*PSARRMI 307
           P WH AT+    RRM+
Sbjct: 813 PVWHEATKNQECRRML 828


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,940
Number of Sequences: 2352
Number of extensions: 14357
Number of successful extensions: 53
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)