Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0948
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2015|AAF48358.3| 1021|Drosophila melanogaster CG33249-P...    30   3.4  
AY071756-1|AAL49378.1|  151|Drosophila melanogaster RH62806p pro...    29   5.9  
AY070967-1|AAL48589.1|  151|Drosophila melanogaster RE06748p pro...    29   5.9  
AE014134-1551|AAF52700.1|  151|Drosophila melanogaster CG9296-PA...    29   5.9  
AY051655-1|AAK93079.1| 1089|Drosophila melanogaster LD07765p pro...    29   7.8  
AE014297-3566|AAN13999.1| 1089|Drosophila melanogaster CG6631-PB...    29   7.8  
AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA...    29   7.8  

>AE014298-2015|AAF48358.3| 1021|Drosophila melanogaster CG33249-PA
           protein.
          Length = 1021

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +2

Query: 449 CRIPSEILSIYVTSRSEMFNTLSSMRELWRGCRFR 553
           C++P ++LSI++    E+   +S M EL    R+R
Sbjct: 165 CQLPQQLLSIWIQREKELLQEISGMGELSGEWRWR 199


>AY071756-1|AAL49378.1|  151|Drosophila melanogaster RH62806p
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 434 DEYHSCRIPSEILSIYVTSRSEMFNTLSSM 523
           D+ H  R+P +IL +   SR   F+T+ SM
Sbjct: 43  DQEHEARVPVKILDMRAVSREINFSTIESM 72


>AY070967-1|AAL48589.1|  151|Drosophila melanogaster RE06748p
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 434 DEYHSCRIPSEILSIYVTSRSEMFNTLSSM 523
           D+ H  R+P +IL +   SR   F+T+ SM
Sbjct: 43  DQEHEARVPVKILDMRAVSREINFSTIESM 72


>AE014134-1551|AAF52700.1|  151|Drosophila melanogaster CG9296-PA
           protein.
          Length = 151

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 434 DEYHSCRIPSEILSIYVTSRSEMFNTLSSM 523
           D+ H  R+P +IL +   SR   F+T+ SM
Sbjct: 43  DQEHEARVPVKILDMRAVSREINFSTIESM 72


>AY051655-1|AAK93079.1| 1089|Drosophila melanogaster LD07765p
           protein.
          Length = 1089

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +1

Query: 454 DTVRDLINLRNIEIRNVQHVIINERALAWLPFPRENEMNPGLRITIDNSTIDEIASHAIQ 633
           D   +L  +  +E     H++         PFP  ++    L +  D S +D   S  +Q
Sbjct: 657 DLAHELSTITEVETPGQSHIVAATPVPK--PFPSFDQYAKELHL--DLSRLDADQSQRLQ 712

Query: 634 GRFNDIII 657
           G FND+I+
Sbjct: 713 GEFNDLIL 720


>AE014297-3566|AAN13999.1| 1089|Drosophila melanogaster CG6631-PB,
           isoform B protein.
          Length = 1089

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +1

Query: 454 DTVRDLINLRNIEIRNVQHVIINERALAWLPFPRENEMNPGLRITIDNSTIDEIASHAIQ 633
           D   +L  +  +E     H++         PFP  ++    L +  D S +D   S  +Q
Sbjct: 657 DLAHELSTITEVETPGQSHIVAATPVPK--PFPSFDQYAKELHL--DLSRLDADQSQRLQ 712

Query: 634 GRFNDIII 657
           G FND+I+
Sbjct: 713 GEFNDLIL 720


>AE014297-3565|AAF56311.1| 1729|Drosophila melanogaster CG6631-PA,
            isoform A protein.
          Length = 1729

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = +1

Query: 454  DTVRDLINLRNIEIRNVQHVIINERALAWLPFPRENEMNPGLRITIDNSTIDEIASHAIQ 633
            D   +L  +  +E     H++         PFP  ++    L +  D S +D   S  +Q
Sbjct: 1297 DLAHELSTITEVETPGQSHIVAATPVPK--PFPSFDQYAKELHL--DLSRLDADQSQRLQ 1352

Query: 634  GRFNDIII 657
            G FND+I+
Sbjct: 1353 GEFNDLIL 1360


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,864,551
Number of Sequences: 53049
Number of extensions: 661717
Number of successful extensions: 1540
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)