Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0948
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   2.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   2.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   3.6  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.3  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   8.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   8.3  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   8.3  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   8.3  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -2

Query: 377 GLRVTSESALVQLHMSLVNESQLQSSSWQTVTVLLCAREVFN 252
           GL V   + L+QL         +   SW ++ +LLC   + +
Sbjct: 87  GLAVMPPAVLLQLTGGTWELGPMLCDSWVSLDILLCTASILS 128


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 433 GRISFLSDTVRDLINLRNIEIRNVQHVI 516
           GR+S L  T    +  R ++I+NV HVI
Sbjct: 500 GRMSILVATA---VAARGLDIKNVSHVI 524


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 222 THAKLITSPFQSRTT 178
           THAKL+ + F+  TT
Sbjct: 554 THAKLVQAAFEQNTT 568


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 630 YCV*RYFINR*IVYCYPETWI 568
           YC+   F+N  IVYC P  WI
Sbjct: 148 YCLFS-FLNT-IVYCVPAGWI 166


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 610 EIASHAIQGRFNDIIIRNSKFVNAR 684
           ++ S A    F+DII R SK  NAR
Sbjct: 174 KVPSAADDRMFDDIIQRLSKKANAR 198


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 610 EIASHAIQGRFNDIIIRNSKFVNAR 684
           ++ S A    F+DII R SK  NAR
Sbjct: 264 KVPSAADDRMFDDIIQRLSKKANAR 288


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 383 PSGLRVTSESALVQLHMSLVNESQLQSSS 297
           P G   TS + ++  H+  +NE+     S
Sbjct: 74  PEGANTTSTTKIIDGHVVTINETTYTDGS 102


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 383 PSGLRVTSESALVQLHMSLVNESQLQSSS 297
           P G   TS + ++  H+  +NE+     S
Sbjct: 122 PEGANTTSTTKIIDGHVVTINETTYTDGS 150


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 383 PSGLRVTSESALVQLHMSLVNESQLQSSS 297
           P G   TS + ++  H+  +NE+     S
Sbjct: 122 PEGANTTSTTKIIDGHVVTINETTYTDGS 150


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 383 PSGLRVTSESALVQLHMSLVNESQLQSSS 297
           P G   TS + ++  H+  +NE+     S
Sbjct: 122 PEGANTTSTTKIIDGHVVAINETTYTDGS 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,582
Number of Sequences: 438
Number of extensions: 3972
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)