Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0946
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    25   0.69 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    25   0.69 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   1.2  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   3.7  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   3.7  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.5  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    21   8.6  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 146 HLGHVDALLSILRPKPTVFGRNLFEPGVQQVWLLPQV 36
           H G V    + L P PTV G  +  PG     L PQ+
Sbjct: 74  HSGMVHNDGTQLMPSPTVSGSEMSSPGAGSGNLSPQI 110


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 146 HLGHVDALLSILRPKPTVFGRNLFEPGVQQVWLLPQV 36
           H G V    + L P PTV G  +  PG     L PQ+
Sbjct: 74  HSGMVHNDGTQLMPSPTVSGSEMSSPGAGSGNLSPQI 110


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = -2

Query: 121 CP--FSARSRPFSAEICSNRACSKSGSCRKSTVSAVCSAR 8
           CP  FS  +   + E C+  +C   G+C     S +C+ +
Sbjct: 11  CPLGFSGINCQTNDEDCTETSCMNGGTCIDGINSYICTCK 50



 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
 Frame = -2

Query: 121 CP--FSARSRPFSAEICSNRACSKSGSCRKSTVSAVCS 14
           CP  F  ++   + + C    C   G+C     S  CS
Sbjct: 210 CPKGFQGQNCELNVDDCKPNPCQNGGTCHDLVNSFSCS 247


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 112 SARSRPFSAEICS 74
           S+R RPF+ E+C+
Sbjct: 129 SSRDRPFTCEVCN 141


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 257 HAGGEELHCGARETVP 304
           H GG+E+H G   + P
Sbjct: 361 HMGGDEVHLGCWNSTP 376


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = +1

Query: 121 SNASTWPRCERWLPILSSGNAAQPLSLFCPKLR 219
           S +  W      +    SG     +SLFCPK +
Sbjct: 76  SGSKIWQMERSCMCCQESGEREASVSLFCPKAK 108


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 6/13 (46%), Positives = 12/13 (92%)
 Frame = +1

Query: 397 HCLSFNYDLFYLN 435
           +C+++ +DLFYL+
Sbjct: 198 NCVTYVFDLFYLS 210


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 132 DMAEMRTMVADLVERQRSSAPVPLLPETENPNV 230
           D  EM+ +   L+E  R   PVP++    N ++
Sbjct: 41  DTLEMKYLERCLMETLRMFPPVPIIARQLNQDL 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,966
Number of Sequences: 336
Number of extensions: 3414
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)