Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0946
(632 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0615 + 4551557-4551835 33 0.14
06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983... 31 0.58
01_06_0683 - 31173763-31174635,31175146-31175436 30 1.3
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 30 1.8
12_01_0294 + 2230539-2230870,2232179-2232574,2232676-2232834,223... 29 2.3
05_04_0158 + 18613265-18615304 29 2.3
04_01_0301 + 4016588-4016627,4016715-4018837 29 2.3
09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528 29 4.1
03_02_0384 - 7972067-7972162,7972776-7972985,7973083-7973286,797... 29 4.1
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 4.1
10_07_0100 + 12861588-12862601 28 5.4
05_07_0083 + 27580710-27580767,27580869-27580924,27581024-275811... 28 7.1
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 28 7.1
10_03_0041 + 7314749-7315012,7315111-7316157,7317592-7317681,731... 27 9.4
08_02_0069 - 11880841-11880936,11881150-11881221,11881263-118813... 27 9.4
04_03_0948 - 21021021-21021040,21022743-21022818,21023167-210232... 27 9.4
04_01_0290 + 3843610-3843712,3844088-3846003 27 9.4
03_02_0242 - 6742342-6742803 27 9.4
>07_01_0615 + 4551557-4551835
Length = 92
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 89 RKRSASGGEWTVTRRHGRDANDGCRSCRAATQLSPCPSSA 208
R+R G W +TR GRDA+D A + + PS+A
Sbjct: 19 RRRHGRAGRWWLTRSSGRDAHDESSRVAATAEAADRPSAA 58
>06_03_0956 +
26296744-26297382,26297595-26297669,26298147-26298341,
26298426-26298559,26298713-26298779,26298985-26299043,
26299204-26299321,26299613-26299726,26299855-26299986,
26300076-26300492,26300904-26300954,26301303-26301373,
26302067-26302151,26302258-26302410,26302522-26302596,
26302755-26302844,26303953-26304000,26304081-26304195,
26305356-26305459,26305582-26305692
Length = 950
Score = 31.5 bits (68), Expect = 0.58
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 156 VADLVERQRSSAPVPLLPETENPNVVEELR*RLVMLEA--RSSTVERARLSLAHEVKHRP 329
+A LV+++ + P+P PETE+P+ +++ + L + R ER L V +
Sbjct: 459 IAGLVDKE--NIPLPERPETEDPDEIQKWKWSLKKAKKANRELHAERCDTELKLSVARKM 516
Query: 330 SVPDGKWLPSVVDFSNAMDRAMPL 401
DG + P +DF RA P+
Sbjct: 517 REEDGFYYPHNLDFRG---RAYPM 537
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 270 SPPA*RAVTSVPRLRWGSQFRAEEGQGLSCVAARQDRQPSFASRP 136
+PPA ++SVP GS A G+G C+ D+ P + + P
Sbjct: 235 APPAQAQLSSVPVHSGGSAPAAAAGEGRRCLHCETDKTPQWRTGP 279
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Frame = -3
Query: 318 SPHERGTVSRAPQWSSSPPA*RAVTSVPRLRWGSQFRAEEGQGLSCVAAR----QDRQPS 151
SP +VS +P+ S S R+V+ P R + +S +AR + R S
Sbjct: 482 SPLREKSVSMSPRRSMSKSLPRSVSRSPVARRSRSPVKARTRSISRSSARSLQRRSRSRS 541
Query: 150 FASRPCRRVTVHSPPEADRFRPKSVRTGR 64
P R+ SPP D+ R S +GR
Sbjct: 542 LERSPVRKSVSRSPPTMDKGRSISRTSGR 570
>12_01_0294 +
2230539-2230870,2232179-2232574,2232676-2232834,
2233109-2233505
Length = 427
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 247 DGSSCWRRGAPLWSARDCPSL 309
DG W G PL+++RDCP L
Sbjct: 61 DGEWVWDDGYPLYASRDCPFL 81
>05_04_0158 + 18613265-18615304
Length = 679
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 146 ANDGCRSCRAATQLSPCPSSARN*EPQRSRGTEVTARHAGGEELHCGA 289
A+ +CR+ T +SP P S R+ R R AR G E A
Sbjct: 8 ADSSVATCRSITAISPLPLSRRSGVGGRRRALPAAAREGDGGEASSAA 55
>04_01_0301 + 4016588-4016627,4016715-4018837
Length = 720
Score = 29.5 bits (63), Expect = 2.3
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Frame = +3
Query: 27 ETVDLRQEPDLLHARFEQISAENGRLRAE---NGQ*RVDM-AEMRTMVADLVERQRSSAP 194
E+ DL++ + + A + + +EN RLR+E Q ++ A++ T+ +LV +
Sbjct: 263 ESADLKRRLEEIQANKDLVESENDRLRSEALITKQKQIMFEAKIETLNMELVALTEAKEA 322
Query: 195 VPLLPETENPNV---VEELR*RLVMLEARSSTVERARLSLAHEV-----KHRPSVPDGKW 350
E +N + +E+L+ + L+ VE L EV K+ S KW
Sbjct: 323 AAKACEAQNDEITKELEDLKRKFEELQTNKDLVEGENDKLQSEVLAIEEKYGQSEAKVKW 382
Query: 351 LPSVV 365
L ++
Sbjct: 383 LNQIL 387
>09_04_0082 + 14408962-14409436,14413356-14413780,14414067-14414528
Length = 453
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -2
Query: 217 SVSGRRGTGAELRCRSTRSATIVRISA---MSTRYCPFSARSRPFS 89
S S RRG GAE R R A + I+A + RY SA +R FS
Sbjct: 16 SSSSRRGGGAERRRREEEEADLEAIAAREQRAFRYEALSAATRGFS 61
>03_02_0384 -
7972067-7972162,7972776-7972985,7973083-7973286,
7973381-7973497,7973692-7973810,7974001-7974341,
7974492-7974646,7974948-7975109,7975262-7975321
Length = 487
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 1 PRAAHYKQRRRWTCGKSQTCCTPGSNRFRPKTVGFGRRMDSNASTWPRCERWLPILSSGN 180
P + Q+RR S+TC TP + P T + +++ S P E + S N
Sbjct: 357 PHVSKSNQKRRQRGDDSKTCATPKKPKIEPDTKKIVVKEETSCSLEPTSEPFASARSDTN 416
Query: 181 AA 186
+
Sbjct: 417 VS 418
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 443 HIEHSS*RCVRIVCDAMIKDITEPILRTDKPMGYE 547
H + S C + D +ITEP+ TD+ YE
Sbjct: 2775 HDDKSKETCSEEISDEQAPEITEPVSHTDRNFAYE 2809
>10_07_0100 + 12861588-12862601
Length = 337
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Frame = -3
Query: 186 SCVAARQDRQPSFASRPCRRVTVHSPPEAD---RFRPKSVRTGR 64
+C A S+A RPC T +PP R RP RT R
Sbjct: 196 ACSTAPPSSSSSYARRPCHAKTPRTPPTTTTTARARPSRSRTVR 239
>05_07_0083 +
27580710-27580767,27580869-27580924,27581024-27581133,
27582083-27582148,27582149-27582278,27582636-27582737,
27582969-27583010,27583153-27583194,27583356-27583432,
27583730-27583856,27583953-27584120,27584359-27584484,
27584575-27584685,27584776-27584910,27585540-27585614,
27585827-27585934,27586015-27586101,27586187-27586273,
27586762-27586830
Length = 591
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -1
Query: 224 GVLSFGQKRDRG*AALPLDKIGNHRSHLGHVDALLSILRPKPTVFGRNLFEP 69
G G +R AAL +K +G VD +++++R FG+N + P
Sbjct: 487 GSRDVGASNNRRLAALYCNKQSGFEEIMGLVDRIVNVVRAPHIKFGQNYYVP 538
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 336 VPKVYVSPHERGTVSRAPQWSSSPPA*RAVTSVPRLR 226
VP SPH G A S+PP RA+++ PR R
Sbjct: 11 VPAPRTSPHAPGRRRPAAPLPSAPPRPRALSAAPRGR 47
>10_03_0041 +
7314749-7315012,7315111-7316157,7317592-7317681,
7318291-7318332
Length = 480
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 154 IVRISAMSTRYCPFSARSRPFSAEICSNRACSKSGSCRKS 35
I+ ++ S R P + ++ + E CS R+ S GSC +S
Sbjct: 212 IIIKNSSSKRKVPINKIAKATAYESCSRRSASSQGSCIRS 251
>08_02_0069 -
11880841-11880936,11881150-11881221,11881263-11881343,
11881471-11881542,11882549-11882770,11882849-11882941,
11883509-11883601,11884546-11884632,11884958-11884990,
11885091-11885185,11886590-11886674,11886778-11886864,
11887757-11887846,11887929-11888057,11888668-11888757,
11888849-11888908,11889074-11889311,11889852-11890054
Length = 641
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -1
Query: 503 CLLSS-HHTLYERTFSLSVQC-V*LFK*NKS*LKDRQWHGSVHGIAEVHDR 357
CL++ + TL++ T L C + LFK + + +D WH S H + E +R
Sbjct: 101 CLIAQVNGTLWDMTRPLEGDCELKLFKFDSNEGRDTFWHSSAHILGESLER 151
>04_03_0948 -
21021021-21021040,21022743-21022818,21023167-21023214,
21023655-21023745,21024524-21024636,21024718-21024778,
21025816-21026007,21026029-21026762
Length = 444
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 449 EHSS*RCVRIVCDAMIKDITEPILRTDKPMG 541
+HSS + + DAM+ + T PIL D+P G
Sbjct: 90 DHSS-LLLPVTSDAMVSNSTAPILEHDEPAG 119
>04_01_0290 + 3843610-3843712,3844088-3846003
Length = 672
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/82 (21%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 9 RALQTAETVDLRQEPDLLHARFEQISAENGRLRAE----NGQ*RVDMAEMRTMVADLVER 176
+A E+VDL+ + + + I +EN +LR+E + + AE+ + +L
Sbjct: 148 KAKMMMESVDLKSRLEEIQGNMDMIKSENDKLRSEALVAEQKLNICEAEIERLKMELGAL 207
Query: 177 QRSSAPVPLLPETENPNVVEEL 242
++ +T+N + +EL
Sbjct: 208 TEANEAAAKAFDTQNEEITKEL 229
>03_02_0242 - 6742342-6742803
Length = 153
Score = 27.5 bits (58), Expect = 9.4
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 345 YRQVPKVYVSPHERGTVSRAPQWSSSPPA*RAVTSVPRLRWGSQFRAEEGQGLSCVAARQ 166
Y ++P VY + A SSSPPA RL WG+ RA + G C
Sbjct: 64 YERLPSVYGTAFHDDDGGGAWSSSSSPPA--CPPRAARLLWGALTRAVQRPG-RCRCPGD 120
Query: 165 DRQPSFASRPCRRVTVHS-PPEADRFRP 85
+ ++ RR + S P+ DR P
Sbjct: 121 EEAGVTTTKERRRSSSSSWRPDPDRRWP 148
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,627,671
Number of Sequences: 37544
Number of extensions: 445576
Number of successful extensions: 1391
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1390
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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