Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0946
         (632 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        34   0.36 
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    34   0.36 
BX641077-1|CAE46038.1|  615|Homo sapiens hypothetical protein pr...    31   3.4  
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai...    31   3.4  
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai...    31   3.4  
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai...    31   3.4  
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai...    31   3.4  
AK055546-1|BAB70951.1|  750|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.     31   3.4  

>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 26/87 (29%), Positives = 41/87 (47%)
 Frame = +3

Query: 21   TAETVDLRQEPDLLHARFEQISAENGRLRAENGQ*RVDMAEMRTMVADLVERQRSSAPVP 200
            ++E  +LR+E +LL  + +    E  R+R+   + R D  E+R        R+RS  P  
Sbjct: 965  SSEEEELREEEELLREQEKMREVEQQRIRSTARKTRRDKEELRAQ----RRRERSKTPPS 1020

Query: 201  LLPETENPNVVEELR*RLVMLEARSST 281
             L   E+ +  EELR    M E   S+
Sbjct: 1021 NLSPIEDASPTEELRQAAEMEELHRSS 1047


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
            protein protein.
          Length = 3926

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 26/87 (29%), Positives = 41/87 (47%)
 Frame = +3

Query: 21   TAETVDLRQEPDLLHARFEQISAENGRLRAENGQ*RVDMAEMRTMVADLVERQRSSAPVP 200
            ++E  +LR+E +LL  + +    E  R+R+   + R D  E+R        R+RS  P  
Sbjct: 1040 SSEEEELREEEELLREQEKMREVEQQRIRSTARKTRRDKEELRAQ----RRRERSKTPPS 1095

Query: 201  LLPETENPNVVEELR*RLVMLEARSST 281
             L   E+ +  EELR    M E   S+
Sbjct: 1096 NLSPIEDASPTEELRQAAEMEELHRSS 1122


>BX641077-1|CAE46038.1|  615|Homo sapiens hypothetical protein
           protein.
          Length = 615

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 RSSTVERARLSLAHEVKHRPSVPDGK-WL 353
           R + ++R ++SL  +VKH+PSVP G+ W+
Sbjct: 528 RETPIKRGQVSLILDVKHQPSVPVGQLWV 556


>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 1495

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 RSSTVERARLSLAHEVKHRPSVPDGK-WL 353
           R + ++R ++SL  +VKH+PSVP G+ W+
Sbjct: 528 RETPIKRGQVSLILDVKHQPSVPVGQLWV 556


>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 1259

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 RSSTVERARLSLAHEVKHRPSVPDGK-WL 353
           R + ++R ++SL  +VKH+PSVP G+ W+
Sbjct: 405 RETPIKRGQVSLILDVKHQPSVPVGQLWV 433


>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 1495

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 RSSTVERARLSLAHEVKHRPSVPDGK-WL 353
           R + ++R ++SL  +VKH+PSVP G+ W+
Sbjct: 528 RETPIKRGQVSLILDVKHQPSVPVGQLWV 556


>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 1259

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 RSSTVERARLSLAHEVKHRPSVPDGK-WL 353
           R + ++R ++SL  +VKH+PSVP G+ W+
Sbjct: 405 RETPIKRGQVSLILDVKHQPSVPVGQLWV 433


>AK055546-1|BAB70951.1|  750|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30984 fis, clone HHDPC2000456. ).
          Length = 750

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 RSSTVERARLSLAHEVKHRPSVPDGK-WL 353
           R + ++R ++SL  +VKH+PSVP G+ W+
Sbjct: 528 RETPIKRGQVSLILDVKHQPSVPVGQLWV 556


>AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.
          Length = 1090

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 13/29 (44%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
 Frame = +3

Query: 270 RSSTVERARLSLAHEVKHRPSVPDGK-WL 353
           R + ++R ++SL  +VKH+PSVP G+ W+
Sbjct: 123 RETPIKRGQVSLILDVKHQPSVPVGQLWV 151


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,144,638
Number of Sequences: 237096
Number of extensions: 2326294
Number of successful extensions: 5754
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5751
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)