Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0945
         (739 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q39PH2 Cluster: Putative uncharacterized protein; n=4; ...    33   7.3  
UniRef50_A4RMF0 Cluster: Putative uncharacterized protein; n=2; ...    33   9.7  

>UniRef50_Q39PH2 Cluster: Putative uncharacterized protein; n=4;
           Burkholderiales|Rep: Putative uncharacterized protein -
           Burkholderia sp. (strain 383) (Burkholderia cepacia
           (strain ATCC 17760/ NCIB 9086 / R18194))
          Length = 754

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 72  WRHSSKWRYFKNNVINCHYSLQPGTALSKTAI 167
           W  SSK  +  N VI C +S +PG+ L+K++I
Sbjct: 47  WTPSSKQHFSGNFVIQCKFSSKPGSLLTKSSI 78


>UniRef50_A4RMF0 Cluster: Putative uncharacterized protein; n=2;
           Sordariomycetes|Rep: Putative uncharacterized protein -
           Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 752

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 327 CICESAQLWENETKPLDVTSRDHSKSPLKK 416
           C+C+S + WE+ T P D ++RD   + L++
Sbjct: 333 CVCDSVRKWESGTVPADYSARDDDGADLQE 362


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,161,432
Number of Sequences: 1657284
Number of extensions: 11576734
Number of successful extensions: 25009
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25004
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)