Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0944
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045) 42 7e-04
SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37) 42 7e-04
SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4) 42 7e-04
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40) 42 7e-04
SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 42 7e-04
SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_4159| Best HMM Match : Vpu (HMM E-Value=2) 42 7e-04
SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8) 38 0.006
SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6) 37 0.014
SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5) 37 0.019
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 36 0.033
SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.076
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 32 0.54
SB_24975| Best HMM Match : ET (HMM E-Value=1) 31 0.94
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_42749| Best HMM Match : zf-CCHC (HMM E-Value=0.0051) 30 2.2
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 30 2.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 3.8
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 5.0
SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 28 6.6
SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 28 8.8
SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_37596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 10 RRPVNCNTTHYRANW 24
>SB_26639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 66 RRPVNCNTTHYRANW 80
>SB_25723| Best HMM Match : Vicilin_N (HMM E-Value=0.0045)
Length = 2506
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 634 RRPVNCNTTHYRANW 648
>SB_17217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 45 RRPVNCNTTHYRANW 59
>SB_12571| Best HMM Match : SBF (HMM E-Value=1.6e-37)
Length = 257
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 7 RRPVNCNTTHYRANW 21
>SB_11176| Best HMM Match : PTS_EIIB (HMM E-Value=4.4)
Length = 117
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 47 RRPVNCNTTHYRANW 61
>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 1885 RRPVNCNTTHYRANW 1899
>SB_55621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 45 RRPVNCNTTHYRANW 59
>SB_46370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 7 RRPVNCNTTHYRANW 21
>SB_29769| Best HMM Match : TNFR_c6 (HMM E-Value=3.60001e-40)
Length = 768
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 39 RRPVNCNTTHYRANW 53
>SB_17246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 88 RRPVNCNTTHYRANW 102
>SB_12056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 66 RRPVNCNTTHYRANW 80
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 77 RRPVNCNTTHYRANW 91
>SB_5500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 53 RRPVNCNTTHYRANW 67
>SB_4159| Best HMM Match : Vpu (HMM E-Value=2)
Length = 779
Score = 41.5 bits (93), Expect = 7e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRANW 676
RRPVNCNTTHYRANW
Sbjct: 77 RRPVNCNTTHYRANW 91
>SB_49172| Best HMM Match : UCR_TM (HMM E-Value=9.8)
Length = 142
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = +1
Query: 658 EGGARYPIRPIVSRITIHWPS 720
+GGA PIRPIVSRITIHWP+
Sbjct: 35 DGGA--PIRPIVSRITIHWPA 53
>SB_1601| Best HMM Match : RuvB_C (HMM E-Value=3.6)
Length = 237
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRAN 679
RRPVNCNTTHYRAN
Sbjct: 84 RRPVNCNTTHYRAN 97
>SB_37618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1
Query: 720 RRPVNCNTTHYRAN 679
RRPVNCNTTHYRAN
Sbjct: 27 RRPVNCNTTHYRAN 40
>SB_51122| Best HMM Match : UCR_TM (HMM E-Value=5.5)
Length = 131
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1
Query: 661 GGARYPIRPIVSRITIHWPS 720
GGA PIRPIVS ITIHWPS
Sbjct: 38 GGA--PIRPIVSHITIHWPS 55
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 35.9 bits (79), Expect = 0.033
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIA-- 231
TT +T +T+ T ++ + A S + +P P + +AP + P T +A
Sbjct: 2230 TTMVPETTAAPATTAALETSIVPETTAASETTVAPETPDAPATTLAPETTAAPETTVAPE 2289
Query: 232 SGPLGATTY---TTPFVQTVPIASTASLPVATHLIKKRSAP 345
+ ATT TT ++T A T +P T ++ SAP
Sbjct: 2290 TTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAP 2330
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/97 (24%), Positives = 39/97 (40%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + T+ + L + A + S P + +AP + + P T +A G
Sbjct: 2134 TTVATETTVAPETTAAPESTLAPEITAAPDTTMVPESTVAPETTVAPETTVVPETTLAPG 2193
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 348
A TT +T T P T ++ +APV
Sbjct: 2194 TTVAQE-TTVAPETTVAPETTVAPETTAALETTAAPV 2229
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/96 (22%), Positives = 38/96 (39%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + TS T ++ + + A + + PV+ +AP + P T A
Sbjct: 17 TTVAPETTAVLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL- 75
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 345
TT ++T + T P T + +AP
Sbjct: 76 ETTMVPETTAALETTVASETTDAPATTLATETTAAP 111
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/96 (23%), Positives = 39/96 (40%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T +T+ V T ++ + A S + + P + +AP + T +A+
Sbjct: 739 TTMVPETTAAPATTAVLETSIVPETTAASETTVAPETTDAPATTLAPKTTTALETTVAA- 797
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 345
TT +T P T S P +T + AP
Sbjct: 798 ------KTTVVPETTPALETTSAPESTAATESTVAP 827
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/96 (22%), Positives = 38/96 (39%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + TS T ++ + + A + + PV+ +AP + P T A
Sbjct: 1092 TTVAPETTAVLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL- 1150
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 345
TT ++T + T P T + +AP
Sbjct: 1151 ETTMVPETTAALETTVASETTDAPATTLATETTAAP 1186
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + + T+ +T L ++ A + + P + +AP + T +A
Sbjct: 83 TTAALETTVASETTDAPATTLATETTAAPETTVAPETTDLPATTLAPETTAAQETTVAPE 142
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 348
A T TVP +TA+ P T +APV
Sbjct: 143 TTAAPETTVAPESTVPPETTAA-PDTTVAPGTTAAPV 178
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + + T+ +T L ++ A + + P + +AP + T +A
Sbjct: 1158 TTAALETTVASETTDAPATTLATETTAAPETTVAPETTDLPATTLAPETTAAQETTVAPE 1217
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 348
A T TVP +TA+ P T +APV
Sbjct: 1218 TTAAPETTVAPESTVPPETTAA-PDTTVAPGTTAAPV 1253
>SB_28728| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 34.7 bits (76), Expect = 0.076
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 679 IRPIVSRITIHWPS 720
IRPIVSRITIHWPS
Sbjct: 18 IRPIVSRITIHWPS 31
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.10
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTY-IASGPLGAT 252
TP ST STP + + I +P P + AP + ITP+T S P +
Sbjct: 137 TPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPS 196
Query: 253 TYTTPFVQTVP-IASTASLPVATHLIKKRSAP 345
T +TP + P ST S+P + S P
Sbjct: 197 TRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 228
Score = 33.5 bits (73), Expect = 0.18
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTY-IASGPLGAT 252
TP ST + +TP + + I +P P + AP + ITP+T S P +
Sbjct: 687 TPSTPSTPSMPNTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPS 746
Query: 253 TYTTPFVQTVP-IASTASLPVATHLIKKRSAP 345
T +TP + P ST S+P + S P
Sbjct: 747 TRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTP 778
Score = 32.3 bits (70), Expect = 0.41
Identities = 27/90 (30%), Positives = 37/90 (41%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATT 255
TP T STP + + I +P P ++ PS+ TP+T S P +T
Sbjct: 26 TPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPST--PSTPCTPST 83
Query: 256 YTTPFVQTVPIASTASLPVATHLIKKRSAP 345
+TP + P ST S P A S P
Sbjct: 84 PSTPSTPSTP--STPSTPSAPSTPSTPSTP 111
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG-PLGAT 252
TP ST STP + S+ +P P + P + TP+T A G P +
Sbjct: 472 TPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAPGTPSTPS 531
Query: 253 TYTTPFVQTVP-IASTASLP 309
T +TP + P ST S+P
Sbjct: 532 TPSTPSTPSTPSTPSTPSMP 551
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +1
Query: 148 HFIKKRSPQWPVSYIAPSSYITPNT-YIASGPLGATTYTTPFVQTVPIA-STASLPVATH 321
H +K +P P + PS+ TP+T S P T +TP + PI ST S P TH
Sbjct: 5 HRLKLSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTP-CTH 63
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATT 255
TP ST STP ++ + +P P + PS+ TP T S P +T
Sbjct: 194 TPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPIT--PSTPSTPST 251
Query: 256 YTTPFVQTVPIASTASLP 309
+TP + + P ST S P
Sbjct: 252 PSTPSMPSTP--STPSTP 267
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGPLGATT 255
TP ST STP ++ + +P P + PS+ TP T S P +T
Sbjct: 744 TPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPIT--PSTPSTPST 801
Query: 256 YTTPFVQTVPIASTASLP 309
+TP + + P ST S P
Sbjct: 802 PSTPSMPSTP--STPSTP 817
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 31.9 bits (69), Expect = 0.54
Identities = 25/96 (26%), Positives = 39/96 (40%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T TS T ++ Q + A + + P + +AP + + P T +A
Sbjct: 2942 TTAAPETTAAPETSAAPDTTMVPQTTSAPATTMAPETTLAPETTLAPETTMAPETTMAPE 3001
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 345
A TT QT A T + P T + + S P
Sbjct: 3002 TTVAAE-TTAAAQTTVAAETTAAPETTIVPETTSVP 3036
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/96 (22%), Positives = 38/96 (39%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + TS T ++ + + A + + PV+ +AP + P T A
Sbjct: 2344 TTVAPETTAVLETSAAPETTMVPETTSAPATTMAPETTAAPVTTMAPETTAAPATTTAL- 2402
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 345
TT ++T + T P T + +AP
Sbjct: 2403 ETTMVPETTAALETTVASETTDAPATTLATETTAAP 2438
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/95 (25%), Positives = 39/95 (41%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + T+ T + + A + + + P + IAP + P T +A G
Sbjct: 396 TTMAPETTIAPETTMAPETTIAPETTAVPGTMVPETTAA-PATIIAPETTAAPETTMAPG 454
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSA 342
A TT +T A A+ P T + K +A
Sbjct: 455 TTAAPE-TTMAPETT-AAPEATAPPETSMAPKTTA 487
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/97 (24%), Positives = 40/97 (41%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + + T+ +T L ++ A + + P + +AP + T +A
Sbjct: 2410 TTAALETTVASETTDAPATTLATETTAAPETTVAPETTDLPATTLAPETTAAQETTVAPE 2469
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 348
A T TVP +TA+ P T +APV
Sbjct: 2470 TTAAPETTVAPESTVPPETTAA-PDTTVAPGTTAAPV 2505
>SB_24975| Best HMM Match : ET (HMM E-Value=1)
Length = 316
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 79 PLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIA-SGPLGATT 255
PL ++TPL ++ + +P P + + S +TPNT ++ S + A+
Sbjct: 80 PLKHRVPVTTNTPLSPSASVTASVSVTPNTPLSPSASVTASVSVTPNTPLSLSASVTASV 139
Query: 256 YTTPFVQTVPIAS-TASLPVATHL 324
TP P AS TAS+ V ++
Sbjct: 140 SVTPNTPQSPSASVTASVSVTPNI 163
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +1
Query: 160 KRSPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRS 339
K++ PVS ++ TP + P T TP +T P ASTA P +T +S
Sbjct: 291 KKTTTKPVSQPGETTASTPKAPGPTQPASTTIEATPQPETQPGASTAKAPGSTEPTVSQS 350
Query: 340 A 342
A
Sbjct: 351 A 351
>SB_28519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 679 IRPIVSRITIHWPS 720
+RP+VSRITIHW S
Sbjct: 33 LRPVVSRITIHWTS 46
>SB_25952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT + TP T+ +STP + +Y+ S SY + +SY + +Y +
Sbjct: 23 TTSYTSTPSYTCTTSYTSTPSYTSTTSYT----PTPSYTCTTSYTSTTSYTSTTSYTPTT 78
Query: 238 PLGATTYTTPFVQTVPIASTASLPVAT 318
TT TP P S P T
Sbjct: 79 SYTPTTSYTPTTSYTPTPSYTPTPSYT 105
>SB_27928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLIS-QPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIAS 234
T+Y T ++TSY S+T S + + S SY + +SY +Y +
Sbjct: 90 TSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTSTTSYTCTTSYTCT 149
Query: 235 GPLGAT---TYTTPFVQTVPIASTASLPVAT 318
T T TT + T ST S T
Sbjct: 150 TSYTCTTSYTSTTSYTSTTSYTSTTSYTSTT 180
>SB_42749| Best HMM Match : zf-CCHC (HMM E-Value=0.0051)
Length = 401
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 309 GK*CSRCDRHGLHEGCCVGSGSKRATCDVGVGSDVGARSDV 187
GK C+ C CC G K+ VG GSD + +++
Sbjct: 259 GKRCNNCKAPNHFSSCCPSLGGKKQVHTVGDGSDSDSSAEM 299
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYI-ASGPLGAT 252
+PL +S+ SS+PL S S + SP S + SS +T ++ + +S PL
Sbjct: 171 SPLTSSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPL--- 227
Query: 253 TYTTPFVQTVPIASTASLPVATHL 324
T +P + P+ S++ L ++ L
Sbjct: 228 TSPSPLTSSSPLTSSSPLTSSSPL 251
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYI-ASGPLGAT 252
+PL +S+ SS+PL S S+ + SP S + SS +T ++ + +S PL
Sbjct: 195 SPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPLTSSSPLTSSSPLTSSSPL--- 251
Query: 253 TYTTPFVQTVPIASTASL 306
T ++P P+ S + L
Sbjct: 252 TSSSPLTSPSPLTSPSPL 269
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 178 PVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 345
P + +AP + + P T +A A TT VPI TA+ P T + AP
Sbjct: 1348 PETTVAPVTTVIPETTVAPDTTVAPKSTTLASTVVPITETAAGPETTLASETTMAP 1403
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +1
Query: 178 PVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 348
P S +AP + I P T IA G A TT +T + T P T + APV
Sbjct: 2099 PESTVAPGTTIAPETTIAPGTTMAPE-TTVAPETTMVPVTTLEPETTMAPESTVAPV 2154
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 3.8
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +1
Query: 136 AYSAHFIKKRSPQWPVSYIAPSSYITPNTYIA--SGPLGATTY---TTPFVQTVPIASTA 300
A S + +P P + +AP + P T +A + ATT TT ++T A T
Sbjct: 194 AASETTVAPETPDAPATTLAPETTAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTT 253
Query: 301 SLPVATHLIKKRSAP 345
+P T ++ SAP
Sbjct: 254 VVPETTPALETTSAP 268
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 178 PVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAPV 348
P S +AP + P T +A G + TT +T T P T ++ +APV
Sbjct: 126 PESTVAPETTAVPETTLAPG-ITVAQETTAAPETTVAPETTVAPETTAALETTAAPV 181
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/96 (26%), Positives = 35/96 (36%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT KT T+ V T + + P + AP + P T A+
Sbjct: 2835 TTSVPKTTAAPETTSVPKTTAAPETTTLPKTTAAPETTSVPKTTAAPGTTSVPKT-TAAP 2893
Query: 238 PLGATTYTTPFVQTVPIASTASLPVATHLIKKRSAP 345
A TT +T P+ T + P T L K +AP
Sbjct: 2894 ETTAVPKTTAAPETTPLPKTTAAPETTTLPKITAAP 2929
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 193 APSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPV 312
APSS +T +GP TT P V T+ +TA+ P+
Sbjct: 804 APSSNPNESTTPTTGPTTGTTALPPGVTTITTPATATTPL 843
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Frame = +1
Query: 196 PSSYITPNTYIASG----PLGATTYTTPFVQTVPIASTASLPVAT 318
P+ TP T +G P G TT TTP T P+ + P T
Sbjct: 809 PNESTTPTTGPTTGTTALPPGVTTITTPATATTPLPPGVTTPAGT 853
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 173 NGP*ATSLLAPTSLPTPTSQVALLEPLPTQHPSCRPCRS 289
N P + LL LPT Q+ L +P P PS P RS
Sbjct: 278 NTPFVSRLLLALVLPTMHLQLLLTKPTPATPPSRAPTRS 316
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 166 SPQWPVSYIAPSSYITPNTYIASGPLGATTYTTPFVQTVPIASTASLPVAT 318
+P P + P++ TP + P TT TTP T P +T + P T
Sbjct: 60 TPTKPTNTTPPAT-TTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTT 109
>SB_10933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 28.3 bits (60), Expect = 6.6
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSP-QWPVSYIAPSSYITPNTYIAS 234
T YHG TP +T Y +TP A + +P + Y S + Y S
Sbjct: 327 TPYHGATPYRGATPYRGATPYRGATPYRGATPYRGATPYRGATPYRGASPHHGATPYRRS 386
Query: 235 GPL-GATTY--TTPFVQTVP 285
P G+T Y +TP+ ++P
Sbjct: 387 TPYHGSTPYRGSTPYRGSIP 406
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/87 (24%), Positives = 36/87 (41%)
Frame = +1
Query: 58 TTYHGKTPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASG 237
TT +T + A T T + ++ A + + + P + +AP + + P T +A+
Sbjct: 169 TTAAAETTVAAETIAAPDTTVAAETTASAETTVAPETTLAPETTMAPETTMAPETTVAAE 228
Query: 238 PLGATTYTTPFVQTVPIASTASLPVAT 318
A TT +T A T P T
Sbjct: 229 STDAPD-TTVAAETTASAETTVAPETT 254
>SB_46249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 834
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +1
Query: 76 TPLLASTSYVSSTPLISQPIAYSAHFIKKRSPQWPVS--YIAPSSYITPNTYIASGPL-- 243
+PL S+S S+PL Y + + K S + S Y + S Y +P Y S PL
Sbjct: 593 SPLYKSSSLYKSSPLYKSSPPYKSSSLYKSSSLYKSSSLYKSSSLYESPPLY-KSSPLYK 651
Query: 244 GATTY-TTPFVQTVPIASTASLPVATHLIKKRS 339
+ Y ++ ++ P+ ++SL ++ L K S
Sbjct: 652 SSPPYKSSSLYRSSPLCKSSSLYKSSPLYKSSS 684
>SB_34458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1318
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 163 RSPQWPVSYIAPSSY--ITPNTYIASGPLGATTYTTPFVQTVPIASTASLPV 312
R P PVSY P+SY P + +S P+ + + +TP + PI ++S+ V
Sbjct: 40 RRPPVPVSYELPASYQRSVPVSTSSSTPVSSPSNSTP---STPIRKSSSVTV 88
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 188 TSLLAPTSLPTPTSQVALLEPLPTQHPSCRPCRSHRLHHFPSQ 316
T+LL P ++ P Q LL+P+ P + S HH+ ++
Sbjct: 675 TTLLQPVTITPPKPQHTLLQPVTITPPKPQHNTSTTSHHYTTK 717
>SB_24487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 685 PIVSRITIHWPS 720
P +SRITIHWPS
Sbjct: 77 PYMSRITIHWPS 88
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,157,858
Number of Sequences: 59808
Number of extensions: 398873
Number of successful extensions: 1333
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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