Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0942
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   5.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.6  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   9.8  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   9.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   9.8  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 463 DLVFSYHFAHSRRN 504
           DLV+SY+ AH + N
Sbjct: 341 DLVYSYNMAHDKNN 354


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 463 DLVFSYHFAHSRRN 504
           DLV+SY+ AH + N
Sbjct: 341 DLVYSYNMAHDKNN 354


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 529 CQASNKPFLRAELPFIFKN 585
           C  SNKPF    +  ++KN
Sbjct: 333 CWDSNKPFAPQNMAIVYKN 351


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 485 LHILGAIERYRDPNNAKRV 541
           +H + + +R+RDPN  +RV
Sbjct: 11  IHGIASCKRHRDPNAIQRV 29


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 178  SGQ*ALGEGLCDIEHRKSSSPSCVRSPG 261
            SG     E LC ++   +SSP C R PG
Sbjct: 996  SGHGFFREHLCGMQ--LTSSPDCTRCPG 1021


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,666
Number of Sequences: 2352
Number of extensions: 17635
Number of successful extensions: 46
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)