Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0938
(575 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0) 128 3e-30
SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 6e-28
SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0) 89 2e-18
SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0) 71 9e-13
SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31) 62 3e-10
SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0) 48 5e-06
SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0) 44 7e-05
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 43 2e-04
SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_37220| Best HMM Match : Laminin_EGF (HMM E-Value=0.024) 41 8e-04
SB_27540| Best HMM Match : Laminin_EGF (HMM E-Value=5.4e-12) 41 8e-04
SB_3235| Best HMM Match : Laminin_EGF (HMM E-Value=3.6e-13) 39 0.003
SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17) 37 0.010
SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0) 36 0.018
SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0) 36 0.031
SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.096
SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 33 0.17
SB_31961| Best HMM Match : EGF (HMM E-Value=0) 33 0.22
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.51
SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.89
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.89
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 31 0.89
SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_46889| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23) 29 2.1
SB_37366| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.82) 29 3.6
SB_24331| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.086) 29 3.6
SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34) 29 3.6
SB_40564| Best HMM Match : Laminin_EGF (HMM E-Value=3.5e-12) 29 3.6
SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_48143| Best HMM Match : Sialidase (HMM E-Value=0.33) 28 6.3
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 6.3
SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 6.3
SB_17037| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_5490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_4181| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23) 28 6.3
SB_20037| Best HMM Match : 7tm_1 (HMM E-Value=3.09687e-43) 28 6.3
SB_4785| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 6.3
SB_53075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_41578| Best HMM Match : Apc15p (HMM E-Value=2.4) 27 8.3
SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14) 27 8.3
SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3) 27 8.3
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39) 27 8.3
>SB_49286| Best HMM Match : Laminin_N (HMM E-Value=0)
Length = 1465
Score = 128 bits (309), Expect = 3e-30
Identities = 60/124 (48%), Positives = 80/124 (64%)
Frame = +3
Query: 24 RPSAANFDLSPVLQDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAPGTQHYAVSDFAVGG 203
RP A NFD SP LQ+WVTA VR+ R++ GDE+ + +YA+ D ++GG
Sbjct: 226 RPDAYNFDNSPALQEWVTAVAVRIHLRRMNTF--GDEV-FGDPNVLRSYYYAIIDLSIGG 282
Query: 204 RCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARD 383
RCKCNGHAS C + +G + +L C C+H+T G DCERCKP + DRPW RA++R+
Sbjct: 283 RCKCNGHASECEETRLWDGQT-----RLQCKCQHDTEGVDCERCKPLYNDRPWARASSRN 337
Query: 384 ANEC 395
ANEC
Sbjct: 338 ANEC 341
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDA 386
C+C GH+ C P+ G+ C+CKHNT G C++C ++ P + T D
Sbjct: 706 CQCYGHSDTCDPVT-GK-----------CNCKHNTTGIRCDKCIDGYYGNP-TQGTPDDC 752
Query: 387 NEC 395
+C
Sbjct: 753 KKC 755
>SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 120 bits (290), Expect = 6e-28
Identities = 61/127 (48%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Frame = +3
Query: 21 GRPSAANFDLSPVLQDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAP-GTQHYAVSDFAV 197
GRPSA+ D S V+Q+WV ATD++V FN + + A P + +YAVS+F V
Sbjct: 216 GRPSASKMDYSAVMQEWVMATDIKVEFNMI-----------SRSARPRDSLYYAVSEFNV 264
Query: 198 GGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATA 377
GGRC CNGHAS C+ + G + CDCKHNT G DC C+PF DRPW AT
Sbjct: 265 GGRCHCNGHASECVSDRNG---------RQVCDCKHNTVGVDCGACRPFFNDRPWRPATH 315
Query: 378 RDANECK 398
ANECK
Sbjct: 316 HSANECK 322
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRP 359
C CN HA C+ E S G + C+HNTAGR C C+ + P
Sbjct: 324 CNCNLHARTCVFSMELFKLSGGRSGGVCVKCRHNTAGRYCHYCREGFYKDP 374
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +3
Query: 180 VSDFAVGGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKP 341
++ V +C C+ H SR + G C CK GR C++C P
Sbjct: 378 ITHIKVCRQCNCHPHGSRGRVCNQSTGQ---------CPCKEGVVGRSCDKCAP 422
>SB_16967| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1706
Score = 89.0 bits (211), Expect = 2e-18
Identities = 42/116 (36%), Positives = 65/116 (56%)
Frame = +3
Query: 51 SPVLQDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAPGTQHYAVSDFAVGGRCKCNGHAS 230
+P +QD+++ TDVR+ + ++G E+ + + +YA+S+ V GRC CNGHA
Sbjct: 238 NPEVQDYLSVTDVRLRLE--YPASDGMELLYQDEQTLNKLYYAISNVEVTGRCSCNGHAM 295
Query: 231 RCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDANECK 398
C +G ++ C+C+HNT G DCE C+P +RPW RA NEC+
Sbjct: 296 GC----------SGPIMSRRCECEHNTMGTDCEMCEPLFNNRPWMRANQTHGNECQ 341
Score = 34.7 bits (76), Expect = 0.055
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHF 350
C CN HA+ C+ E G L C+HNT G C+ C H+
Sbjct: 343 CNCNNHATSCV-YNETLGYG------LCKGCQHNTQGDHCQNCTAKHY 383
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKPFHFDRPWGRATARDANECK 398
C CK N GR C++C P H WG T ECK
Sbjct: 418 CSCKPNVYGRRCDQCIPGH----WG-FTLPPQGECK 448
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACD-CKHNTAGRDCERCKPFHFDRPWGRATARD 383
C CN + C P G C+ C +N G +C RCKP ++ A D
Sbjct: 1008 CSCNDRSRFCHPETGVCTDCKIGTHGYRCELCTNNVQGPECVRCKPQYWGLSKDGCKACD 1067
Query: 384 AN 389
N
Sbjct: 1068 CN 1069
Score = 28.7 bits (61), Expect = 3.6
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 22/76 (28%)
Frame = +3
Query: 192 AVGGRCKCN-GHA----SRCIP---------MKEGEGSSAGGVVQLA------CDCKHNT 311
A GG+C C G A + C+P K+ E S +G + + C CK N
Sbjct: 753 AYGGQCPCKPGVAGLKCNHCLPGYYALSRSGCKKCECSMSGSITPICDNADGKCQCKANV 812
Query: 312 AGRDCERCK--PFHFD 353
G C+ CK FH D
Sbjct: 813 EGAKCDACKYGTFHLD 828
>SB_22642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1574
Score = 78.6 bits (185), Expect = 3e-15
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Frame = +3
Query: 51 SPVLQDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAPGTQHYAVSDFAVGG-----RCKC 215
S +Q+ + T++R+ F +LH + GD++ + +YAV D + G C C
Sbjct: 1291 SSKVQNLLKITNIRINFTKLHTL--GDDLLDPRPEIKRKYYYAVYDLVIRGSCSCYECNC 1348
Query: 216 NGHASRCI---PMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDA 386
NGHA +C + + G+ +GGV Q DC+HNT GR+CERCKP H+ P + + DA
Sbjct: 1349 NGHAVKCRFDPAVYQASGNVSGGVCQ---DCEHNTVGRNCERCKPLHYQDPSKKFSDPDA 1405
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 249 EGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFD 353
E + A G+V C CK N G C+RCK F+
Sbjct: 1423 EAKNDPAAGLVAGRCICKRNVGGVRCDRCKAGFFN 1457
>SB_16968| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1101
Score = 70.5 bits (165), Expect = 9e-13
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Frame = +3
Query: 60 LQDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAPGTQHYAVSDFAVGGRCKCNGHASRC- 236
+Q +++ATD+R+ + +G E+ K + +YAVSD V RCKC+GHA C
Sbjct: 218 VQQYLSATDLRLRME--YPGTDGLEV-AKDEVTLKQYYYAVSDLEVIARCKCHGHARWCD 274
Query: 237 IPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATAR-DANECK 398
P + G+ CDC HNT G DCERC P ++ W AT+ + N C+
Sbjct: 275 FPHETGKN----------CDCLHNTTGDDCERCLPLFNNKTWMPATSETEPNPCE 319
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 204 RCKCNGHASRCI-PMKEGEGSSAGGVVQLACDCKHNTAGRDCERCK 338
RC+C+ HA C +EG G+ DC HNT G CERCK
Sbjct: 320 RCECHSHADSCTYSQQEGYGTCD--------DCYHNTEGHFCERCK 357
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKP 341
C CK GR C++CKP
Sbjct: 749 CQCKPGVTGRTCDKCKP 765
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKP--FHFD 353
C CK N G CE C+P +H D
Sbjct: 894 CTCKSNALGEKCESCRPGTYHSD 916
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 219 GHASRCIPMKEGEGSSAGGVVQL--ACDCKHNTAGRDCERCKPFHFDRP 359
G+ + C+ + G +++ Q C CK N R C+ CK ++D P
Sbjct: 424 GYCTECLCVGNGTVNASLNCDQYNGQCSCKPNVHTRTCQECKHGYWDFP 472
>SB_12645| Best HMM Match : Laminin_EGF (HMM E-Value=3e-31)
Length = 541
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +3
Query: 63 QDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAPGTQ--HYAVSDFAVGGRCKCNGHASRC 236
++W A+ +R+ ++ + D + L + T+ +Y++ D +VG C CNGHA C
Sbjct: 166 EEWTRASHIRLRLLKVKTLL-ADLLPLANKDPSVTRRYYYSIKDISVGAICMCNGHADVC 224
Query: 237 IPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDANECK 398
I S C+C+HNT G CE+C + W T + N C+
Sbjct: 225 IQTNTSTPSQQ----DFRCNCRHNTCGTRCEKCCEGFVQKKWRPGTPDNPNACE 274
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Frame = +3
Query: 207 CKCNGHASRCI--PMKEGEGSS--------AGGVVQLACDCKHNTAGRDCERCKPFHFDR 356
C C+GH+++C P S GGV + DC+HNTAG +CERCK +F R
Sbjct: 414 CNCHGHSTKCYYDPTVAAAKRSLDLNGRYEGGGVCE---DCQHNTAGINCERCKQGYF-R 469
Query: 357 PWG 365
P G
Sbjct: 470 PRG 472
>SB_32355| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1358
Score = 48.0 bits (109), Expect = 5e-06
Identities = 33/104 (31%), Positives = 47/104 (45%)
Frame = +3
Query: 51 SPVLQDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAPGTQHYAVSDFAVGGRCKCNGHAS 230
S L +W+ TD+R+ F + V D+ A HYAVS+ V G C CNG +
Sbjct: 661 SQKLLEWINVTDIRLEFITMERV-----FDV---LAAKWHHYAVSEVRVFGFCACNGQGT 712
Query: 231 RCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPW 362
C + +S G Q C C+ + G C+ C P + PW
Sbjct: 713 GC------KFNSTVGDFQ--CVCQPGSCGYYCDECCPAYNQYPW 748
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 264 SAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRA-TARDANE 392
S GGV Q DCKHNT G +CERC+P ++ RP R+ A DA E
Sbjct: 796 SGGGVCQ---DCKHNTEGINCERCRPLYY-RPENRSQNAVDACE 835
>SB_471| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 587
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 186 DFAVGGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHF 350
DF +C CN R +P G+ ++ G C CK N G +CE+CK HF
Sbjct: 471 DFPRCKQCGCNPAGIRLLP---GQQNTCGNGNDTKCTCKENVQGAECEQCKSMHF 522
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 291 CDCKHNTAGRDCERC 335
C C+ N GR C+RC
Sbjct: 360 CTCRRNVVGRKCDRC 374
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/64 (39%), Positives = 32/64 (50%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDA 386
C+C GHAS C P K G + DC+HNT G++CE C + G AT
Sbjct: 330 CRCYGHASSCNP-KTG----------VCVDCQHNTVGKNCEACAVGFY----GIATKGTP 374
Query: 387 NECK 398
N+CK
Sbjct: 375 NDCK 378
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKPFHF 350
C CK N G+ C+RC P F
Sbjct: 255 CKCKSNVIGQRCDRCAPGSF 274
>SB_35857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2680
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFD 353
C+C G S GV+ C+CK T GR C+ CKP +D
Sbjct: 499 CQCTGPGVETGKTSCARDDSTPGVIAGQCECKQYTQGRQCDACKPGFYD 547
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 204 RCKCNGHASRCIPMKEGEGSSAGGVVQ---LACDCKHNTAGRDCERCKPFHFDRPWGRAT 374
+C+CN HA+ C + S A V + +C HNTAG+ C C+ F P +
Sbjct: 432 KCECNNHATACYYNSSLDPSPASRTVGGGGVCINCLHNTAGQFCHVCRDDFFREPGKSLS 491
Query: 375 ARD-ANECKGT 404
A D + C+ T
Sbjct: 492 AVDVCSPCQCT 502
Score = 36.7 bits (81), Expect(2) = 0.003
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +3
Query: 15 PRGRPSAANFDLSPVLQDWVTATDVRV-VFNRLHMVNEGDEIDLKKQAAPGTQHYAVSDF 191
P G P +N S D++ A++VR+ ++N + NE +++A+
Sbjct: 284 PFGAP-CSNLYCSTRFLDFIKASNVRIQLYNHTLIQNEKH------------RYFALKRV 330
Query: 192 AVGGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCK 338
V GRC+C+GHA + + +G SS G + C+C +T + ++C+
Sbjct: 331 LVTGRCECHGHAQK-VTFIKGNSSSPG---RCRCECDPSTFTQGEKQCE 375
Score = 31.9 bits (69), Expect = 0.39
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKPFHFDRP 359
C CK N GR C+RC P + P
Sbjct: 843 CQCKPNIGGRRCDRCMPGSYGGP 865
Score = 21.0 bits (42), Expect(2) = 0.003
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 324 CERCKPFHFDRPWGRATARDANEC 395
CE C P + ++ + R T D C
Sbjct: 407 CESCLPMYNNKAFLRGTNDDPYPC 430
>SB_37220| Best HMM Match : Laminin_EGF (HMM E-Value=0.024)
Length = 104
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDA 386
C+C+GHA + +K SS+ G + CD T G CE C P + ++ + R T D
Sbjct: 2 CECHGHAQKVTFIKGN--SSSPGRCRCECDPSTFTQGEKCESCLPMYNNKAFLRGTNDDP 59
Query: 387 NEC 395
C
Sbjct: 60 YPC 62
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 204 RCKCNGHASRCIPMKEGEGSSAGGVV---QLACDCKHNT 311
+C+CN HAS C + S A V + +C HNT
Sbjct: 64 KCECNNHASACYYNSSLDPSPASRTVGGGGVCINCLHNT 102
>SB_27540| Best HMM Match : Laminin_EGF (HMM E-Value=5.4e-12)
Length = 674
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +3
Query: 204 RCKCNGHASRCIPMKEGEGSSAGGVVQ---LACDCKHNTAGRDCERCKPFHFDRPWGRAT 374
+C+CN HA+ C + S A V + +C HNTAG+ C C+ F P +
Sbjct: 233 KCECNNHATACYYNSSLDPSPASRTVGGGGVCINCLHNTAGQFCHVCRDDFFREPGKSLS 292
Query: 375 ARD-ANECKGT 404
A D + C+ T
Sbjct: 293 AVDVCSPCQCT 303
>SB_3235| Best HMM Match : Laminin_EGF (HMM E-Value=3.6e-13)
Length = 170
Score = 39.1 bits (87), Expect = 0.003
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = +3
Query: 141 LKKQAAPGTQHYAVSDFAVGGRC---KCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNT 311
+ K+ APG VS G+C CN H + C + G L +CKHNT
Sbjct: 86 IMKRCAPGHHRVNVSGDPFYGKCIPCNCNNHTNDCY-------ADTG----LCYNCKHNT 134
Query: 312 AGRDCERCKPFHFDRPWGRATARDANECK 398
AG CE C D +G A +CK
Sbjct: 135 AGEHCELCD----DGFYGNAADGTPGDCK 159
>SB_35429| Best HMM Match : Laminin_EGF (HMM E-Value=5.3e-17)
Length = 218
Score = 37.1 bits (82), Expect = 0.010
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +3
Query: 150 QAAPG-TQHYAVSDFAVGGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDC 326
+ APG T+ F+ RCKCN H+ C P G + +C HNTAG C
Sbjct: 1 RCAPGYTRVKPGPGFSKCTRCKCNRHSLECDP-------ETGKCI----NCDHNTAGDRC 49
Query: 327 ERC-KPFHFDRPWGRATARDANECKGTVIFAA 419
E+C F+ D G T D C + A+
Sbjct: 50 EKCASGFYGDATQG--TPVDCKPCSCPLTIAS 79
>SB_10244| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 205
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = +3
Query: 201 GRCK---CNGHASRCIPMK---EGEGSSAGGVVQLACDCKHNTAGRDCERCK 338
GRCK N + C P G SS V C CK N GRDC RCK
Sbjct: 94 GRCKPGFYNMTSEGCRPCDCNVNGSSSSLCDHVTGQCSCKANVVGRDCSRCK 145
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKP 341
C CK GRDC RCKP
Sbjct: 82 CRCKPGVEGRDCGRCKP 98
>SB_6200| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 683
Score = 35.5 bits (78), Expect = 0.031
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 252 GEGSSAGGVVQLACDCKHNTAGRDCERCK 338
G SS V C CK N GRDC RCK
Sbjct: 159 GSSSSLCDHVTGQCSCKENVVGRDCSRCK 187
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDA 386
C+CN +C+ + GE DC+HNT G C++C +G ATA+
Sbjct: 107 CQCNNSTDKCL--RSGE----------CRDCQHNTTGFYCDKC----VTGTYGNATAQQC 150
Query: 387 NEC 395
C
Sbjct: 151 KAC 153
Score = 31.5 bits (68), Expect = 0.51
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKP 341
C CK GRDC RCKP
Sbjct: 48 CRCKPGVEGRDCGRCKP 64
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +3
Query: 201 GRCK---CNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCK 338
GRCK N + C P +S V C+C NT GR CE C+
Sbjct: 60 GRCKPGFYNMTSEGCRPCDCKGPNSVCDPVSGECECPANTVGRTCEPCQ 108
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/72 (30%), Positives = 26/72 (36%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDA 386
C CN H S + + GV C C G C +CK +F P A D
Sbjct: 201 CACNVHGSASLQCDDS------GV----CPCNLEVIGTKCAQCKTGYFGLPKMTCKACDC 250
Query: 387 NECKGTVIFAAC 422
N GTV C
Sbjct: 251 N-VDGTVNGTVC 261
>SB_52863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 33.9 bits (74), Expect = 0.096
Identities = 25/68 (36%), Positives = 27/68 (39%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWGRATARDA 386
C CNGH + G G C CK NT G +CERCK P R R
Sbjct: 133 CDCNGHGDVTL----GVCDRMTG----QCFCKDNTEGLNCERCKSGLVGNP--RYGGRCY 182
Query: 387 NECKGTVI 410
ECK I
Sbjct: 183 YECKSRSI 190
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 33.9 bits (74), Expect = 0.096
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 204 RCKCNGHASRCIPMKEGEGS-SAGGVVQLACDC--KHNTAGRDCERC-KPFHFDR 356
RC+ GH +R P ++ EG + G +A DC K + G C RC K HF R
Sbjct: 80 RCQETGHFARDCPNEKKEGCYTCGDESHIARDCPEKKESPGESCYRCGKSGHFAR 134
>SB_33920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRP 359
C CN HA C ++ G +C HNT G++CE+CK ++ P
Sbjct: 544 CNCNRHAKSC-------DANTG----KCNNCLHNTIGKNCEQCKKGYYGDP 583
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +3
Query: 162 GTQHYAVSDFAVGGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCER 332
G H +G C N + P + G G G + C C H +G DCER
Sbjct: 933 GAYHCQCKQGFLGRHCDLNINECLSYPCRNG-GECKDGAGEYTCLCPHGFSGDDCER 988
>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
Length = 2813
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +3
Query: 198 GGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDC 326
G C+ N P K G GS + C CKH G+DC
Sbjct: 950 GKNCETNIDECNSSPCKNG-GSCTDRISGFTCTCKHGFTGKDC 991
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 ATASTTPPVEIARDASRSTSIDPG--AARPPETPTNVKVL*YSLR 420
A S PP + D S ++DPG +PP+ PT K L S++
Sbjct: 70 AEPSPPPPPRLYEDEPTSPNVDPGPPTFKPPDPPTAAKTLPSSIK 114
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 292 ATASTTPPVEIARDASRSTSIDPG--AARPPETPTNVKVL*YSLR 420
A S PP + D S ++DPG +PP+ PT K L S++
Sbjct: 1646 AEPSPPPPPRLYEDEPTSPNVDPGPPTFKPPDPPTAAKTLPSSIK 1690
>SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1400
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 289 PATASTTPPVEIARDASRSTSIDPGAARPPETPTNV 396
P+ AST+ P + + ST+IDP PP T V
Sbjct: 116 PSVASTSSPQSASSMSQNSTNIDPTQVVPPSNTTQV 151
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 30.7 bits (66), Expect = 0.89
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Frame = +3
Query: 192 AVGGRC-KC-NGHASRCIPMK---EGEGSSAGGVVQL------ACDCKHNTAGRDCERCK 338
A G RC +C +G+ + K + E S+ G V + AC CK N G +C CK
Sbjct: 1203 AAGDRCERCRDGYYGDAVVAKNCAKCECSACGAVTSVCNHTNGACQCKANVIGPNCSTCK 1262
Query: 339 P 341
P
Sbjct: 1263 P 1263
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 288 ACDCKHNTAGRDCERC 335
ACDC NT G +CE C
Sbjct: 696 ACDCPPNTVGLNCELC 711
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKPFHFDRPWGRATARDANECKGTV 407
C CK + GR C++C + P+ + DA G+V
Sbjct: 748 CPCKPSHTGRRCDQCAVGYHGYPYCQQCDCDARGVNGSV 786
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCK 338
C CK GR CERCK
Sbjct: 1295 CLCKPGATGRRCERCK 1310
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKPFHFDRP 359
C C+ GR C RCK ++ P
Sbjct: 658 CQCRPYVIGRQCNRCKTGYYGFP 680
>SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1378
Score = 30.7 bits (66), Expect = 0.89
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 289 PATASTTPPVEIARDASRSTSIDPGAARPPETPTNV 396
P+ AST+ P + + ST+IDP PP T V
Sbjct: 95 PSVASTSSPQSASSMSQNSTNIDPTQVVPPSNTTQV 130
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 289 ASCTTPPALEPSP-SFIGMQRDACPLHLHRPP 197
AS TPP P P S + M + +CP HL RPP
Sbjct: 366 ASNITPP---PQPQSILQMPQTSCPTHLRRPP 394
>SB_42659| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5834
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 288 ACDCKHNTAGRDCERCKP 341
AC C+H +G CE C+P
Sbjct: 396 ACTCRHGFSGSSCESCQP 413
>SB_8046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCK 338
CDCK N GR C+ CK
Sbjct: 320 CDCKPNVQGRACDTCK 335
Score = 30.3 bits (65), Expect = 1.2
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKPFHFD 353
C C+ + GR C+ C+P ++D
Sbjct: 716 CSCRPHVIGRKCDECRPDYYD 736
>SB_52861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1487
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +3
Query: 252 GEGSSAGGVVQLAC-DCKHNTAGRDCERCKPFH 347
G G A + C DC+++T G C+ C+P +
Sbjct: 270 GHGHCANATKRDVCTDCRNHTTGSSCQYCEPLY 302
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/65 (26%), Positives = 28/65 (43%)
Frame = +3
Query: 141 LKKQAAPGTQHYAVSDFAVGGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGR 320
L K PG H+ + + RC+CNGH S C + G+ S + +++
Sbjct: 374 LCKHCVPG--HFFLQGYC--SRCQCNGHGSIC--DERGKCSCENNTAEQCHSGQNDCYKN 427
Query: 321 DCERC 335
C +C
Sbjct: 428 QCTKC 432
>SB_46889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 754
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +3
Query: 198 GGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCE 329
G +C+ N + P K G G+ G+ + +C C G++C+
Sbjct: 213 GDKCENNDDECKSSPCKNG-GTCVDGINRYSCTCVAGFTGKNCK 255
>SB_552| Best HMM Match : Laminin_EGF (HMM E-Value=1.3e-23)
Length = 198
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 204 RCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERC-KPFHFDRPWGRATAR 380
+C CNG+ P G ++ G C +NT+G +C+ C FH G ATA+
Sbjct: 77 KCNCNGNVD---PGVTGNCNTTTGE---CLKCLYNTSGFNCQWCVSGFH-----GNATAK 125
Query: 381 DANECKGT 404
C T
Sbjct: 126 TCQACNCT 133
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = +3
Query: 198 GGRCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFDRPWG--RA 371
GG N A C+ +G + +C + AGR CERC+ ++ P
Sbjct: 22 GGPFSANSFARSCVLGSDG--------LPTCTNCSESHAGRQCERCQDGYYGTPTDPVNG 73
Query: 372 TARDANECKGTV 407
R N C G V
Sbjct: 74 QCRKCN-CNGNV 84
>SB_37366| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.82)
Length = 705
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 289 PATASTTPPVEIARDASRSTSIDPGAARPPETPTNV 396
P+ AST+ P + + T+IDP PP T V
Sbjct: 159 PSVASTSSPQSASSMSQNPTNIDPTQVVPPSNTTQV 194
>SB_24331| Best HMM Match : Rick_17kDa_Anti (HMM E-Value=0.086)
Length = 444
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -3
Query: 339 ACISRNLDRRC---CACSRRPVALLHQRWSP--LLPSSGCSATRARCTCTDLRRRNQIP 178
AC+ L+ + A RP H R LLP S CSA A +C D R R +IP
Sbjct: 182 ACVYEKLESKVEDMNALQTRPTPASHMRRGLRYLLPVSACSAVAAILSC-DCRLRMRIP 239
>SB_13566| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 289 PATASTTPPVEIARDASRSTSIDPGAARPPETPTNV 396
P+ AST+ P + + T+IDP PP T V
Sbjct: 116 PSVASTSSPQSASSMSQNPTNIDPTQVVPPSNTTQV 151
>SB_13004| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.34)
Length = 636
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 289 PATASTTPPVEIARDASRSTSIDPGAARPPETPTNV 396
P+ AST+ P + + T+IDP PP T V
Sbjct: 500 PSVASTSSPQSASSMSQNPTNIDPTQVVPPSNTTQV 535
>SB_40564| Best HMM Match : Laminin_EGF (HMM E-Value=3.5e-12)
Length = 186
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKP 341
C CK + GR C+ CKP
Sbjct: 78 CFCKSHVQGRQCDTCKP 94
>SB_21351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 289 PATASTTPPVEIARDASRSTSIDPGAARPPETPTNV 396
P+ AST+ P + + T+IDP PP T V
Sbjct: 116 PSVASTSSPQSASSMSQNPTNIDPTQVVPPSNTTQV 151
>SB_5167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 439 NYSAYRHAANITVPLHSLASRAVA 368
N A H N+T PLH LASR +A
Sbjct: 277 NQIASLHLVNVTSPLHYLASRGLA 300
>SB_42841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 291 CDCKHNTAGRDCERCKPFH 347
C CK AG++C+RC H
Sbjct: 40 CKCKPGVAGQNCDRCSVQH 58
>SB_48143| Best HMM Match : Sialidase (HMM E-Value=0.33)
Length = 317
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 290 GQLHYSTSAGALSFLHRDAARRV 222
GQ HY GA+ + HR+A R+
Sbjct: 128 GQYHYEVDGGAVRWFHRNAKGRI 150
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 27.9 bits (59), Expect = 6.3
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 210 KC-NGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCER--CKPFHFDRPWGRATAR 380
KC +GH + +G+ A G + CD +T G R C+P + GR + +
Sbjct: 2502 KCTSGHCIANSSVCDGDTDCADGSDEKDCDLGTSTCGAGLFRCSCRPGYLLMSDGR-SCQ 2560
Query: 381 DANECK 398
D +ECK
Sbjct: 2561 DVDECK 2566
>SB_29802| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 546
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 204 RCKCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCERCKPFHFD 353
+C C+ + +P + G G Q +C CK N G C+RC+ +F+
Sbjct: 200 KCNCDPGGTVVLPGQSKVGCF--GAKQ-SCMCKMNVQGTLCDRCRFGYFN 246
>SB_17037| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 722
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 384 RLGRSRGPRVDRSGTACISRNLDRRCCAC 298
R+G+S R++ S C S +DR C C
Sbjct: 341 RVGQSLLNRIEPSSRTCASAGIDRHWCPC 369
>SB_5490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 601
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 507 PINYSRI--STTAGPLVKYYKANRKIIVLTDTQRISQYLYIR 388
P+ Y+ + S TA ++ Y A+ I+ L R S+Y+YIR
Sbjct: 122 PLKYTELMHSRTATGIIVYIWAHSFIVALLPVFRWSRYIYIR 163
>SB_4181| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 276 VVQLACDCKHNTAGRDCERCKPFHFDRP 359
V+ A CK T +DCE CK RP
Sbjct: 76 VLVSAITCKDTTPAQDCETCKDEGMTRP 103
>SB_41869| Best HMM Match : Laminin_EGF (HMM E-Value=9.7e-23)
Length = 198
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = +3
Query: 207 CKCNGHASRCIPMKEGEGSSAGGVVQLACD-CKHNTAGRDCERCKPFHFDRPWGRATARD 383
C CN + C P G C+ C + G +C RCKP ++ A D
Sbjct: 86 CSCNDRSRFCHPETGVCTDCKIGTHGYRCELCTNYVQGPECVRCKPQYWGLSKDGCKACD 145
Query: 384 AN 389
N
Sbjct: 146 CN 147
>SB_20037| Best HMM Match : 7tm_1 (HMM E-Value=3.09687e-43)
Length = 453
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +3
Query: 3 CI*YPRGRPSAANFD-LSPVLQDWVTATDVRVVFNRLHMVNEGDEIDLKKQAAPGTQHYA 179
C P PSA D + L+D + +V + HM + + LK TQ+++
Sbjct: 335 CSWNPSDNPSAVVIDKVRDTLRDNESNRANQVTLTKAHMASFDSDSSLKV-----TQYHS 389
Query: 180 VSDFAVGGRCKCNGHASRCIPMKEGEGSSAGG 275
++ NGHASR ++ GS G
Sbjct: 390 SFPRSMRSSGSSNGHASRSNVTRKANGSGTRG 421
>SB_4785| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 623
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 120 NEGDEIDLKKQAAPGTQHYAVSDFAVGGR 206
N D+ID+KK + T HY + + GGR
Sbjct: 267 NHLDDIDIKKGVSWITVHYMIGEVQYGGR 295
>SB_53075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -1
Query: 395 TFVGVSGGRAAPGSIEVERLASLAISTGGVVLAVAGQLHYSTSAGALSFLHRD 237
+F+ GRA P E++ LA+L+ + GG+ + QL Y+ + L L RD
Sbjct: 51 SFLPTLFGRAEPLPEELKELATLSPAQGGIGIPDLKQLEYACNE-QLEELKRD 102
>SB_41578| Best HMM Match : Apc15p (HMM E-Value=2.4)
Length = 391
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +1
Query: 289 PATASTTPP-VEIARDASRSTSIDPGAARPPETPTNV 396
P+T TT P + D +IDP RP E PT +
Sbjct: 335 PSTQRTTDPDIHRPSDPLAQQTIDPEIHRPSEPPTQI 371
>SB_22619| Best HMM Match : TSP_1 (HMM E-Value=8.5e-14)
Length = 506
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/41 (29%), Positives = 16/41 (39%)
Frame = +3
Query: 210 KCNGHASRCIPMKEGEGSSAGGVVQLACDCKHNTAGRDCER 332
KC H S IP + G + C C+ G CE+
Sbjct: 323 KCPFHLSETIPCNRNACENGGTPISGRCKCRAGYEGTCCEK 363
>SB_17622| Best HMM Match : zf-CCHC (HMM E-Value=0.3)
Length = 374
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 312 RCCACSRRPVALLHQRWSPLLPSSGCSATRARCTCTDL 199
RC AC++ + LLH+ S ++ S A TCT +
Sbjct: 166 RCEACNKNHLTLLHEDRSAPAKAAPPSPPEASATCTQV 203
>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
Length = 1607
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 312 RCCACSRRPVALLHQ-RWSPLLPSSGCSATRARCTCTDL 199
RC AC++ + LLH+ R +P P+ S A TCT +
Sbjct: 637 RCEACNKNHLTLLHEDRSAPAKPAPP-SPPEASATCTQV 674
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,850,189
Number of Sequences: 59808
Number of extensions: 421592
Number of successful extensions: 1695
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1669
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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