Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0936
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       27   0.16 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   5.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.9  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   7.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 21/82 (25%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
 Frame = +3

Query: 270 GDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQ 449
           G        D+     +Y  E++        K +PT  +S +        +  N E   +
Sbjct: 393 GSQEESRVLDLSKPGCSYTGEQKSRRKGPAFKVDPTQVESEEEDEETSTTVFSNVEVVQE 452

Query: 450 ETG--EKDSNANNNKETSEPLQ 509
           E    E DSN NNNKE     Q
Sbjct: 453 EAKKEESDSNNNNNKEEGNSCQ 474


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 317 DLPAREGEGWRYGTSQ 364
           D PA  G GW +G  +
Sbjct: 328 DTPAHAGNGWNWGPQE 343


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 636 FVLKFLQPVYHHQFH 592
           F++  + P YH QFH
Sbjct: 5   FIIDSMLPKYHQQFH 19


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 636 FVLKFLQPVYHHQFH 592
           F++  + P YH QFH
Sbjct: 5   FIIDSMLPKYHQQFH 19


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +2

Query: 290 CYRY*GYGTDLPA--REGEGWRYGTSQR 367
           C RY     DL    R+GE WR+G +++
Sbjct: 549 CARYSAATQDLNKLLRKGEKWRWGRNEQ 576


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 565 CLTSNDSPVSTFTVS 521
           CL SN + V+T+T S
Sbjct: 678 CLASNSASVTTYTTS 692


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 317 DLPAREGEGWRYG 355
           D P+  G GW++G
Sbjct: 305 DAPSHAGNGWQWG 317


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 548 LSSFNIHSLSYGLL*RFTGLFVIVCIRVFLTCFLIGIFII 429
           L  F +H L    +  F   F+I  I +   C LI +  I
Sbjct: 199 LDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCI 238


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 317 DLPAREGEGWR 349
           D PA  GEGW+
Sbjct: 298 DAPAHVGEGWQ 308


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = -2

Query: 367 SLRCSVPPT 341
           SLRC VPPT
Sbjct: 196 SLRCVVPPT 204


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,990
Number of Sequences: 336
Number of extensions: 3460
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)