Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0936
(737 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0107 + 785993-786359,786773-787703,787807-787975,788472-78... 75 8e-14
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 32 0.41
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 32 0.55
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 31 0.72
03_06_0579 + 34870958-34874578 31 0.72
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 31 0.95
04_04_1462 - 33769122-33769151,33769385-33769426,33769571-337701... 31 0.95
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 0.95
07_03_1214 + 24931142-24932314,24934177-24934434 30 1.7
11_06_0153 - 20693663-20693689,20693808-20694096,20694493-206948... 30 2.2
08_02_1444 + 27135119-27135196,27135437-27135506,27135599-271357... 29 2.9
04_04_1212 - 31786063-31786195,31786275-31786398,31786486-317865... 29 3.9
03_06_0195 + 32256771-32258792 29 3.9
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 3.9
03_06_0608 - 35039319-35039903,35040328-35040387 29 5.1
09_04_0151 - 15154063-15154296,15155616-15155660,15155749-151558... 28 6.7
08_02_0794 + 21265399-21265683,21266047-21266160,21266861-212671... 28 6.7
05_04_0132 + 18303925-18307164 28 6.7
11_06_0655 - 25923171-25923185,25923208-25923432,25923865-259243... 28 8.9
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 28 8.9
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 28 8.9
06_03_0083 + 16374830-16374922,16375917-16375974,16377893-163780... 28 8.9
>02_01_0107 +
785993-786359,786773-787703,787807-787975,788472-788588,
788815-788961
Length = 576
Score = 74.5 bits (175), Expect = 8e-14
Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 24 IS*LVFS-AMPKSIKHLIVDTSAFIRA-ANLQDIAENVYTIQEVIDEITNDRQRKKLVVL 197
+S LV S A + +VD +A I A L A + T+ EV++E+ + R++L +L
Sbjct: 47 VSRLVASCANTSGVAVAVVDANAVISGGAALSSSAARLVTVPEVLEEVRDASARRRLALL 106
Query: 198 PYDLKVKDVFADNIKFITEFSKKTGDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPT 377
++ D + +K + +F+++TGD +LS DIK++AL Y LE E + GT HL+++P
Sbjct: 107 MAPVETLDPAPEFVKKVVKFARETGDLQTLSDVDIKIIALAYMLEAE-IHGTNHLREQPP 165
Query: 378 MQKSVKVTGL 407
+ V V L
Sbjct: 166 PLRVVNVRNL 175
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 459 EKDSNANNNKETSE-PLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQ 635
E+D + + +T E Q I + + E + E+ + + +E+DDD EE+S++
Sbjct: 533 EEDQLSGDEDDTEELDEDQDISDNDSEENDDELELDSDMDEENDVSESDDD---EELSEK 589
Query: 636 INDMDLKDDKVDE 674
++D D D+ D+
Sbjct: 590 LDDSDEGSDQDDD 602
>02_02_0011 +
6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 31.9 bits (69), Expect = 0.55
Identities = 25/135 (18%), Positives = 56/135 (41%)
Frame = +3
Query: 264 KTGDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENA 443
K L D + L +L + + TE+L P++ + ++ G + P +EN
Sbjct: 515 KNDPQDDLEYVDNEKSDLMQELMVDDLKDTENLPPIPSLDEFMQ-----GLDSEPPFENL 569
Query: 444 NQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEE 623
+ T E+DS+ + +T+ + E V V E + +E+ + +E
Sbjct: 570 SAGTPEEDSDDRDEADTTAESAELPEEEVKVSAAEKIVSEADLPSSQDKSESKLESPKDE 629
Query: 624 ISKQINDMDLKDDKV 668
+ + ++ ++ K+
Sbjct: 630 VGSNLGPVEQREGKL 644
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 31.5 bits (68), Expect = 0.72
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Frame = +3
Query: 360 LKDEPTMQKSVKVTGLA---GFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETV 530
++DE +QK T A NL + A+Q K NANN + + ++V
Sbjct: 4760 MEDENRVQKEEHNTDRAPGDDHNLEVPHLQASQSRTNKSENANNLEHREIQTDTYVQDSV 4819
Query: 531 NVETGESF----EVKHQQNCQTTTNETD---DDKLAEEISKQINDMDLKDDKVDELMVKV 689
ET E+F K + T D D +L+ + I D+D+K VD V++
Sbjct: 4820 QGETDETFGDFVSFKQPPADEKTVMRDDLANDRELSTPMEINITDVDMKGPIVDWKSVEL 4879
Query: 690 S 692
+
Sbjct: 4880 T 4880
>03_06_0579 + 34870958-34874578
Length = 1206
Score = 31.5 bits (68), Expect = 0.72
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +3
Query: 282 SLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYEN-ANQETG 458
SL A + +L Q+ K+K T HL + + V+ LAGF++ + A G
Sbjct: 988 SLDAANAFPASLWVQVNKDKRESTIHLVSSISAKHRENVSSLAGFDIQTIMDQLAYTLRG 1047
Query: 459 E-KDSNANNNKETSEPLQQPIGETVNVETGESFEVK 563
E K N+ N T +G+T + TG FE K
Sbjct: 1048 ESKFKNSKKNTTTGGLSMTFLGDT--MVTGAKFEDK 1081
>05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 31.1 bits (67), Expect = 0.95
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 459 EKDSNANNNKETSEPL--QQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISK 632
EK++ N+N E L +Q + + G+ KH Q + + E + L E+ +
Sbjct: 1205 EKEATLNSNMRLHEQLDRKQKLELEIAHLKGKLQVTKHTQGTEDSDLEKTIEALTNELEE 1264
Query: 633 QINDMDLKDDKVDELMVK 686
+I DM+ D+ L++K
Sbjct: 1265 KIEDMNYMDNMNQTLILK 1282
>04_04_1462 -
33769122-33769151,33769385-33769426,33769571-33770158,
33770398-33770508,33770585-33770625,33771238-33771382,
33771578-33771781,33772626-33772769,33772991-33773183,
33774559-33774602,33774694-33774822,33774907-33774954,
33775058-33775120,33775198-33775236,33776694-33776767,
33777460-33777518,33777709-33777768,33777920-33778044,
33778693-33778751,33779418-33779511,33779572-33779625,
33779775-33779813,33780423-33780602
Length = 854
Score = 31.1 bits (67), Expect = 0.95
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +3
Query: 138 IQEVIDEITNDRQRKKLVVLPYDLKVKDVFADNIKFITEFSKKTGDYSSLSATDIKVMAL 317
++E E+ ++ +K + D KVK+ F +NIKF + KT D +S K +
Sbjct: 289 VRERKRELKQAKEARKKAIDDMDPKVKEAF-ENIKFYKFYPVKTPDTPDVSNVKAKYINR 347
Query: 318 TYQLEKEKVGG 350
Y+ +GG
Sbjct: 348 YYRHAHHLMGG 358
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 31.1 bits (67), Expect = 0.95
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 348 GTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGET 527
G E QK +++ L LH E + E ++ ++ L+Q +GE+
Sbjct: 436 GESRAAAENASQKILELEALLQ-TLHATEEALKLQLEEAEARVEVAEKKGSDLEQLLGES 494
Query: 528 VNVETGESFEVK--HQQNCQTTTNETDDDKLAEEISKQINDMDLKDDKVDELMVKV 689
N S E+K ++ Q + + +KL EE + N ++ +K++EL +
Sbjct: 495 ENKLVASSGELKLLEERVQQEAASSAEKEKLLEEAT---NSVEAYKEKINELQASL 547
>07_03_1214 + 24931142-24932314,24934177-24934434
Length = 476
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +3
Query: 432 YENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDD 608
YE N + E + ++ E +E L QPI + + G F+ + +E DDD
Sbjct: 377 YEEGNDDDEE---DVDDEDEDTEYLVQPIAQPQAMAVGNDFDAAEADDADEDRDEVDDD 432
>11_06_0153 -
20693663-20693689,20693808-20694096,20694493-20694829,
20695304-20696516,20700247-20700744
Length = 787
Score = 29.9 bits (64), Expect = 2.2
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Frame = +3
Query: 282 SLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGE 461
S I V LT + + E + ++ + VT + ++ N + +
Sbjct: 271 SSDLNSISVKNLTRESAPAEENAAESSSFQILGKRKLYVTSDSSHGMNSNIKRQRKYICP 330
Query: 462 KDSNANN----NKETSEPLQQPIGETVNVETGESFE--VKH---QQNCQTTTNETDDDKL 614
DS+++N N + + P Q G+ V +E E +H QQ CQ N+T K
Sbjct: 331 SDSDSSNEQICNDDVAVPDNQSTGQNVPIEVDSEEEGNARHGGNQQTCQKNVNDTAAQKY 390
Query: 615 AEEI 626
+
Sbjct: 391 LNSV 394
>08_02_1444 +
27135119-27135196,27135437-27135506,27135599-27135758,
27136005-27136086,27136335-27136551,27136729-27136793,
27137039-27137293
Length = 308
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 273 DYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLH 425
DY ++ A D++VM T + E +GG +P LAG N H
Sbjct: 189 DYVTVEARDLRVMPGTLAAKYESLGGEVKWMGKPDKVIYTSAMSLAGVNPH 239
>04_04_1212 -
31786063-31786195,31786275-31786398,31786486-31786597,
31786691-31786822,31786929-31787111,31787351-31787479,
31787618-31787788,31788142-31788244,31788628-31788737,
31789158-31789265,31789337-31789512,31790082-31790352,
31790524-31790738,31791042-31792574,31792665-31792728,
31793171-31793251
Length = 1214
Score = 29.1 bits (62), Expect = 3.9
Identities = 28/120 (23%), Positives = 50/120 (41%)
Frame = +3
Query: 333 KEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQ 512
K K + PT++ S+K G +G + + + + E +N +E+SE
Sbjct: 62 KPKGAASRTYAPRPTVESSMKKIGQSGTDEGDLGTSNGKLSSEATEQTSNVEESSE---- 117
Query: 513 PIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQINDMDLKDDKVDELMVKVS 692
+ + NV + E + T E + + E+S + D D D K+DE K+S
Sbjct: 118 -VDFSGNVSSSVFLEGMDDA-FEAETEEEVEQNQSPELSSESMDDDAIDRKLDEYRGKIS 175
>03_06_0195 + 32256771-32258792
Length = 673
Score = 29.1 bits (62), Expect = 3.9
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Frame = +3
Query: 450 ETGEKDSNANNNKETSEPLQQPIG----ETVNVETGESFEVKHQQNCQTTTN---ETDDD 608
E D ++ +E S+P ++ IG ET + E ES + + + TT+ ++D+D
Sbjct: 164 EENPDDEIFDDEEEESDPEEEDIGSSDLETDSDEYIESTDEESDYEEEDTTDLESDSDED 223
Query: 609 KLAEEISKQINDMDLKDDKVDE 674
+ E S +D+D D+ +D+
Sbjct: 224 TESTESSHDEDDLDDDDESLDD 245
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.1 bits (62), Expect = 3.9
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Frame = +3
Query: 315 LTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYE----NANQETGEKDSNAN- 479
LT++ EKEKV G+E K EP ++S V +L + E + E NA
Sbjct: 2550 LTFEQEKEKVEGSEETK-EPVKEQSYDVEMDVQKSLETDEELKRNTCDLEAPVYQDNAQD 2608
Query: 480 --NNKETSEPLQQPIG--ETVNVETG-ESFEVKHQQNCQTTTNETDDDKLAEEISKQIND 644
++K S PI E + E ESF+ Q+N + T E +D L + +
Sbjct: 2609 EISSKLISAKAADPIKKMEARDFELDEESFDTVCQENVEAAT-EIEDGSLNRDQDDITSP 2667
Query: 645 MDLKDDKVDEL 677
++D ++E+
Sbjct: 2668 KASQEDALEEV 2678
>03_06_0608 - 35039319-35039903,35040328-35040387
Length = 214
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/92 (20%), Positives = 35/92 (38%)
Frame = +3
Query: 411 GFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTT 590
GF HP + + + T +P + G+T N T + Q T
Sbjct: 14 GFFSHPVCDLFSSPNARFSKKKYGGRLTIQPNIE-FGKTQNSRTQRKWRTFSADQAQATV 72
Query: 591 NETDDDKLAEEISKQINDMDLKDDKVDELMVK 686
+ D+K EE + + +D + D+++ K
Sbjct: 73 VDAGDNKTWEEAKQILTSLDYSIEDADKMLKK 104
>09_04_0151 - 15154063-15154296,15155616-15155660,15155749-15155820,
15155932-15156024,15156282-15156351,15156716-15156912,
15156946-15157215,15158620-15158757,15158841-15158930,
15159041-15159247,15159987-15160154,15160300-15160503,
15160584-15160670,15160748-15160861,15161689-15161835,
15161914-15162063,15162211-15162276,15162376-15162480,
15162625-15162798,15162930-15163154,15163534-15163590,
15163858-15164019,15164234-15164302,15164391-15164471,
15164823-15164925,15165011-15165156,15165285-15165359,
15165441-15165508,15165586-15165667,15165745-15165858,
15166358-15166476,15166692-15166781,15166862-15166988
Length = 1382
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 486 KETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEI---SKQINDMDLK 656
+ET E ++ + + N++TG + HQQ T + DKL EI + IN+ +L
Sbjct: 1212 RETFEESERLLKKERNIDTGVNENELHQQLLSIT---EERDKLLSEIKYMNSVINESELI 1268
Query: 657 DDK--VDELMVKVS 692
K +DEL ++S
Sbjct: 1269 QAKATIDELSSRIS 1282
>08_02_0794 +
21265399-21265683,21266047-21266160,21266861-21267126,
21267336-21267834
Length = 387
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Frame = -2
Query: 388 DFCIVGSSLRCSVPPTFSFSSW*VSAITLISVAERLE*SPVF-FENSVMNF--MLSAKTS 218
D+C+V RCSV PTF F W L+ + +R SP F F+ S ++ +L + S
Sbjct: 262 DYCLVLDQ-RCSVSPTFHF-KWSNYDYCLV-LDQRCSVSPTFHFKWSSYDYCLVLDQRCS 318
Query: 217 LTFKSYGRTTSFFLCLSL 164
++ + + +S+ CL L
Sbjct: 319 VSPTFHFKWSSYDYCLVL 336
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 28.3 bits (60), Expect = 6.7
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +3
Query: 447 QETGEKDSNANNN--KETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAE 620
QE E N + KE + Q G+ N+E+ EV N + N DD
Sbjct: 454 QELAETADNIPDECCKEETSMEQDEGGDGTNMESESISEVAEHPNVEDEENTQDDGGSEM 513
Query: 621 EISKQ-INDMDLKDDKVDELMVK 686
EIS++ I+ ++D +E+ K
Sbjct: 514 EISEEIISGFGCEEDFSEEVTSK 536
>11_06_0655 -
25923171-25923185,25923208-25923432,25923865-25924324,
25924330-25924985
Length = 451
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 579 QTTTNETDDDKLAEEISKQINDMDLKDDKVDE 674
+T ETD DK+ E + K I D+ K D++ E
Sbjct: 181 ETKKAETDMDKVVENLDKTIQDLCTKIDRMLE 212
>10_08_0911 -
21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 27.9 bits (59), Expect = 8.9
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 6/134 (4%)
Frame = +3
Query: 264 KTGDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENA 443
++ D S ++ ++ L + E G+ EP M+K G + PN +
Sbjct: 361 RSDDTSKRASATLQSSFLQVEHASEGTKGSIDRSSEPAMKKF-------GASEEPNSAKS 413
Query: 444 NQETGEKDSNANN----NKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDK 611
E K+S+ + + E +Q P G+ + G S E K+ + T + +DD K
Sbjct: 414 QGEPDLKNSSPHLVIPLPTISGEFIQSPKGKQLAHVAGVSEETKYDRVDDTNHSTSDDSK 473
Query: 612 LA--EEISKQINDM 647
LA E++ ++++
Sbjct: 474 LAMLEQLQDSVDNL 487
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 372 PTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEP 503
PT +K++ T A L P+ +N+N+ T + + +++EP
Sbjct: 1946 PTSRKNLTTTDRAKRKLVPSMDNSNRTTNKTSEIPGKSADSTEP 1989
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 541 VSTFTVSPMGCCKGSLVSLLLFALESFS 458
+S F V P GCC + V + A+ SFS
Sbjct: 185 ISIFCVDPNGCCNFTTVQAAVNAVPSFS 212
>06_03_0083 +
16374830-16374922,16375917-16375974,16377893-16378089,
16378176-16378292,16378437-16378497,16378603-16378691,
16378808-16378882,16378992-16379080,16379203-16379252,
16379539-16379699,16380004-16380132,16380548-16380928
Length = 499
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 541 LESHLKSNTNKTVKQQQMKLMMINWLKKFQNKSMI 645
L + + SN KT+ ++Q ++NW KK K +
Sbjct: 370 LVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKV 404
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,623,190
Number of Sequences: 37544
Number of extensions: 325057
Number of successful extensions: 1052
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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