Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0936
(737 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17377| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 2e-30
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_39225| Best HMM Match : NIF (HMM E-Value=0) 36 0.026
SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 32 0.56
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 32 0.56
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 31 0.74
SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12) 31 0.97
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_59332| Best HMM Match : Pap_E4 (HMM E-Value=3.3) 30 1.7
SB_42039| Best HMM Match : DUF1299 (HMM E-Value=9.6) 30 1.7
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 30 1.7
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 1.7
SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_10201| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 29 3.9
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 29 3.9
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_14448| Best HMM Match : BACK (HMM E-Value=3.9e-10) 29 3.9
SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14) 29 3.9
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 3.9
SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_21841| Best HMM Match : WD40 (HMM E-Value=0.00078) 29 3.9
SB_16232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_39210| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.2
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 29 5.2
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 29 5.2
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 28 6.9
SB_11869| Best HMM Match : Excalibur (HMM E-Value=8) 28 6.9
SB_56211| Best HMM Match : SRP19 (HMM E-Value=0.51) 28 6.9
SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 9.1
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_11166| Best HMM Match : CARD (HMM E-Value=0.001) 28 9.1
>SB_17377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 130 bits (313), Expect = 2e-30
Identities = 81/214 (37%), Positives = 120/214 (56%), Gaps = 13/214 (6%)
Frame = +3
Query: 60 IKHLIVDTSAFIRAANLQDIAENVYTIQEVIDEITNDRQRKKLVVLPYDLKVKDVFADNI 239
IKHL+ D++AF++ L IAENVYTI EV+ EI + R+ L VLPY+++ + + +
Sbjct: 12 IKHLVADSAAFLKRVPLDTIAENVYTISEVVSEIKDAATRQSLAVLPYEIQFRQPSTEAL 71
Query: 240 KFITEFSKKTGDYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQ----KSVKVTGL 407
K +TEFSK TGD+ LSA D++VMALTYQLEKE G EHLK +PT Q + V L
Sbjct: 72 KAVTEFSKLTGDFKVLSAVDLRVMALTYQLEKE-FCGVEHLKTKPTQQVQYSQGVVGNNL 130
Query: 408 AGFNLHPNYE--NANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEV---KHQQ 572
GF + N + ++ Q+ E S N + +P+ +T+ E E + +
Sbjct: 131 PGFYVEKNAKDPSSTQDETEIPSTEPANNDCEDPVGDDSDKTLEDEIDEISGLPGCSISE 190
Query: 573 NCQTTT----NETDDDKLAEEISKQINDMDLKDD 662
C T T +E+ +E K+ ND+ ++DD
Sbjct: 191 KCTTDTPMQASESQSLSQVQEYPKEDNDL-VEDD 223
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/89 (22%), Positives = 43/89 (48%)
Frame = +3
Query: 396 VTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQN 575
+T N++ N +N N + + ++ N+NK T+ + + N + ++ N
Sbjct: 28 ITRTTNININENNDNTNDDNNKHINDDNDNK-TNNNDKDTNDDNTNEDNDKNNN--DDNN 84
Query: 576 CQTTTNETDDDKLAEEISKQINDMDLKDD 662
+T N+T+D+ + ++ K ND + DD
Sbjct: 85 NKTNDNDTNDENINDDNEKNTNDKNNNDD 113
>SB_39225| Best HMM Match : NIF (HMM E-Value=0)
Length = 1772
Score = 36.3 bits (80), Expect = 0.026
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 333 KEKVGGTEHLK-DEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQ 509
K +GG + +K D T + V ++ + N N + D N N ET
Sbjct: 1300 KSSMGGGKAVKSDTRTCENDESVVHSESNLVNGSNNNVNSKMTNVDENDVNMTETFPSAD 1359
Query: 510 QPIGETVNVETGESFEVKHQQN-CQTTTNETDDDKLAEEISKQINDMDLKDDKVDE 674
+ ETG+ +K +N Q + N +++K+ +E ++ +LK D+ ++
Sbjct: 1360 GKSDSLRSCETGDDLNLKRLKNETQVSDNAQENEKMVDENVQEEQVQNLKSDQTEQ 1415
>SB_44756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 34.3 bits (75), Expect = 0.10
Identities = 25/109 (22%), Positives = 38/109 (34%)
Frame = +3
Query: 318 TYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETS 497
T E TE+ + T S K T + NY E S NN+ + +
Sbjct: 133 TKATENYSTKATENYSTKATENYSTKAT--ENYKATENYSTKATENYSTKSKENNSTKAT 190
Query: 498 EPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQIND 644
E E + + E+F K +N T E K +E S + +
Sbjct: 191 ENYSTKATEKYSTKATENFSTKATENYSTKATEKYSTKASENYSTKATE 239
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 429 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEV 560
N E++N GE+D NN+ +P + IG+ V +E FE+
Sbjct: 103 NIESSNANDGEQDGGDNNSTTDEKPPVEMIGDRVLIERDGKFEL 146
>SB_52560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1263
Score = 32.7 bits (71), Expect = 0.32
Identities = 24/120 (20%), Positives = 47/120 (39%)
Frame = +3
Query: 273 DYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQE 452
DYS D L +Q+ +EK G E++ P + + + + N N NQ+
Sbjct: 95 DYSDDDLED--TFGLNFQIMREKYGALEYIDLVPGGGEVPVTQDNSNDDDNNNSNNQNQQ 152
Query: 453 TGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISK 632
+ D+N NN ++ + + N G + + + +DD+ + I +
Sbjct: 153 QQKDDNNNNNKSNNNDDDKNNSKDDNNNNNGNKNSNNNSDSDYNNNKDNNDDENSNSIDE 212
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +3
Query: 420 LHPNYENANQETGEKDSNANNNKETSEPLQQP----IGETVNVETGESFEVKHQQNCQTT 587
+HP +EN N++ EK ++ S+ + + +TV VKH Q Q
Sbjct: 705 VHPTFENYNEKADEKQRKRRVLEDPSDDSEDERAVNMYDTVKRRHDTPSPVKHGQRHQQE 764
Query: 588 TNETDDDKLAEEISKQINDMDLKDDK 665
++ DDD +E ++ + D +D+
Sbjct: 765 EDDEDDDSDDDEEEEEGDGEDEGEDE 790
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +3
Query: 459 EKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQI 638
E +N +NN ++ QQP N T + + + QQ+ TTTN +++K ++I+K +
Sbjct: 689 ETRTNNSNNNNSNHTQQQPNINNKNSHTQQQKQKQPQQS--TTTNTLNNNKNTQQITKTL 746
Score = 31.1 bits (67), Expect = 0.97
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 417 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGE-SFEVKHQQNCQTTTN 593
N H + Q +N NN + ++ + + + +N+ + + K QQ TTTN
Sbjct: 713 NSHTQQQKQKQPQQSTTTNTLNNNKNTQQITKTL---ININNNNPTQQQKQQQQQSTTTN 769
Query: 594 ETDDDKLAEEISKQI 638
+++K ++I+K +
Sbjct: 770 TLNNNKNTQQITKTL 784
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 31.5 bits (68), Expect = 0.74
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 417 NLHPN--YENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTT 590
NL PN Y+ NQ T N N+ T++P QP + N T + Q T
Sbjct: 203 NLPPNQPYKQTNQPT-----NQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPT 257
Query: 591 NETD 602
N+T+
Sbjct: 258 NQTN 261
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Frame = +3
Query: 435 ENANQETGEKDSNAN-NNKETSEPL----QQPIGETVNVETGESFEVKHQQNCQTTTNET 599
EN N+E+ E+ S A+ +++E E + +P+ T++V + VK + + ++
Sbjct: 548 ENTNEESKEEGSEADQSDEEAVEEMYFYFHKPLPITISVLHILNGVVKDEDDDDEDNDDE 607
Query: 600 DDDKLAEEISKQINDMDLKDDKVDE 674
DDD AE + ++ + DD DE
Sbjct: 608 DDDDTAE-VHEENEQVSSDDDSTDE 631
>SB_56605| Best HMM Match : WD40 (HMM E-Value=2.5e-12)
Length = 630
Score = 31.1 bits (67), Expect = 0.97
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 4/144 (2%)
Frame = +3
Query: 108 LQDIAENVYTIQEVIDEITNDRQRKKLVVLPYDLKVKDVF---ADNIKFITEFSK-KTGD 275
L+ ++ Y QE++ + +Q+ LPY ++D+ D + + EF + TG
Sbjct: 32 LEVTKQHNYLQQELLHHVL--QQKDVTSSLPYSTSIEDLANADVDTLSDVNEFLRASTGS 89
Query: 276 YSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQET 455
S+ D + L+ G D P K+ + TGL LHP+ + +
Sbjct: 90 LQSVGTVDGTDVGLSSSSASALQG------DRPGKPKARRRTGLPEEFLHPDRKTRRAPS 143
Query: 456 GEKDSNANNNKETSEPLQQPIGET 527
+ ++ +S PL P+G T
Sbjct: 144 LPSLKSGESDNNSSMPL-VPVGPT 166
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/82 (19%), Positives = 31/82 (37%)
Frame = +3
Query: 429 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDD 608
+Y N N ++N NNN + N + ++ + ++ DDD
Sbjct: 258 SYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDYDDDDDDDDDCDDDDDDDD 317
Query: 609 KLAEEISKQINDMDLKDDKVDE 674
+ ++ +D D DD D+
Sbjct: 318 DVDDDDDDDDDDNDDDDDDDDK 339
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 564 HQQNCQTTTNETDDDKLAEEISKQINDMDLKDDKVD 671
H +N T + DK AEEI KQ L+D+KVD
Sbjct: 2894 HGRNLINATTDERPDKKAEEIIKQAAKDPLEDNKVD 2929
>SB_59332| Best HMM Match : Pap_E4 (HMM E-Value=3.3)
Length = 286
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 423 HPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 557
H N N N ++N NNN ET + P+GE + E+ E
Sbjct: 8 HDNNNNNNNNNNNNNNNNNNNNETDD---APVGEENHAGDAETTE 49
>SB_42039| Best HMM Match : DUF1299 (HMM E-Value=9.6)
Length = 63
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 423 HPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFE 557
H N N N ++N NNN ET + P+GE + E+ E
Sbjct: 8 HDNNNNNNNNNNNNNNNNNNNNETDD---APVGEENHAGDAETTE 49
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 498 EPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQINDMDLKDDKVDEL 677
E L++ G+ + +G + +V+ Q+N T E + +L +K D ++DK+++L
Sbjct: 777 EKLKEENGQMKSTVSGLASDVEMQRNKVKTLREQYEQQLENTRAKLRESYDKREDKMEDL 836
Query: 678 M 680
M
Sbjct: 837 M 837
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 30.3 bits (65), Expect = 1.7
Identities = 47/226 (20%), Positives = 101/226 (44%), Gaps = 18/226 (7%)
Frame = +3
Query: 54 KSIKHLIVDTSAFIRAANLQDIAENVYTIQEVIDEITNDRQRKKLVVLPYDLKVKDVFAD 233
++++ + +T + A ++++ ++ +E++ D R K+ VL ++ D
Sbjct: 1813 ENVRDELAETRRALAEAEEKNVSLSIQ--EELVTSKQLDEARDKIFVLKEEIIKADSQLA 1870
Query: 234 NIKFITEFSKKTGDYSSLSATDI--KVMALTYQLEKEK------VGGTEHLKDEPTMQKS 389
K I+E KKT + D+ ++ L +LEK + + + L++E Q+
Sbjct: 1871 EHKGISESLKKTVSKKTEVIEDLNRQIKYLEDELEKVRKKEVSLLATLDTLREEKKDQEQ 1930
Query: 390 -VKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGES-FEVK 563
++ G+ L+ ++ +E + +N+ S L+ GE ++E S + K
Sbjct: 1931 MLQDNGIRLAELNTQIQDLFEENKTLEEKVSND---SYKLESAAGEVKSLERERSVLKNK 1987
Query: 564 HQQNCQTTTNETDDDKLAE----EISKQ----INDMDLKDDKVDEL 677
+Q Q E++D A+ E+ +Q I +D K+ +DEL
Sbjct: 1988 LEQVTQKLCKESEDKARAQKQLGELQRQMDAKIRQIDAKEQFIDEL 2033
>SB_24395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -1
Query: 170 IISYFINNLLYSINIFSNVLKVCRPYECRGIHNQMLDRLRHCAEH*SR 27
I+ ++NLL S + NVL+ E + QM+ RL H EH S+
Sbjct: 229 ILELDLSNLLSSSDFTENVLRYGNEAEVMLVKPQMVSRLTHLNEHDSQ 276
>SB_3878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 243
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 435 ENANQETGEKDSNANNNKETSEPL----QQPIGETVNVETGESFEVKHQQNCQTTTNETD 602
+N E EK +AN +E E ++ I E + E E + N + +E +
Sbjct: 141 DNDEVEEIEKREDANEKEEIEEREDANEKEEIEEREDDNEKEEIEEREDDNEKEEIDERE 200
Query: 603 DDKLAEEISKQINDMDLKDDKVDE 674
DD EEI ++ +D DD+V+E
Sbjct: 201 DDNEEEEIEEREDD----DDEVEE 220
>SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/126 (14%), Positives = 54/126 (42%)
Frame = +3
Query: 288 SATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKD 467
S+ ++ + + + +K++ G ++ + +G N+ N N +++ +
Sbjct: 69 SSGNMNISSNRNKYDKQRSSGNMNISSNRNNDDKQRSSG--NMNISSNRNNDDKQRSSGN 126
Query: 468 SNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQINDM 647
N ++N+ ++ + ++ ++ + + N ++N +DDK + I+
Sbjct: 127 MNISSNRNKNDKQRSSGNMNISSNRNKNDKQRSSGNMNISSNRNNDDKQRSSGNMNISSN 186
Query: 648 DLKDDK 665
K+DK
Sbjct: 187 RNKNDK 192
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/128 (17%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = +3
Query: 288 SATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKD 467
S+ ++ + + + +K++ G ++ + +G + + N + + +G +
Sbjct: 15 SSGNMNISSNRNKYDKQRSSGNMNISSNRNKNDKQRSSGNMNISSNRNKYDKQRSSGNMN 74
Query: 468 SNANNNKETSEPLQQPIGETVNVETGESFEVKHQQ--NCQTTTNETDDDKLAEEISKQIN 641
++N NK Q+ G +N+ + + + K + N ++N +DDK + I+
Sbjct: 75 ISSNRNKYDK---QRSSGN-MNISSNRNNDDKQRSSGNMNISSNRNNDDKQRSSGNMNIS 130
Query: 642 DMDLKDDK 665
K+DK
Sbjct: 131 SNRNKNDK 138
>SB_10201| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1162
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 438 NANQETGEKDSNANNNKETS-EPLQQPIGETVNVETGESFE 557
NA QE G+ D + NNN S E P+GE + E+ E
Sbjct: 1108 NARQEDGDLDKHDNNNNNNSNETDDAPVGEENHAGDAETTE 1148
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +3
Query: 426 PNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDD 605
P + NQ TG++ N+ T + + P G+ N TG+ F Q T +
Sbjct: 91 PTGQQPNQPTGQQP-----NQPTGQQPKDPTGQQPNDPTGKQFNQPTGQQLTDPTGQQPT 145
Query: 606 DKLAEEI 626
D E+I
Sbjct: 146 DPTGEQI 152
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +3
Query: 351 TEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETV 530
T+ + T Q + +T A L P + NQ T ++ NK T + QP G+
Sbjct: 50 TQQANNPLTQQANKSLTQQANNPLTPKGKQPNQPTDQQP-----NKPTGQQPNQPTGQQP 104
Query: 531 NVETGE 548
N TG+
Sbjct: 105 NQPTGQ 110
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 29.5 bits (63), Expect = 3.0
Identities = 26/101 (25%), Positives = 47/101 (46%)
Frame = +3
Query: 273 DYSSLSATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQE 452
D SL ++K A+ ++LE+ +V H + Q ++ ++G N E +
Sbjct: 136 DRYSLLKNELK--AVKWELEQARV--QLHRTERERDQACRELAEVSGQKSAKNMETSINS 191
Query: 453 TGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQN 575
++N NN +E S+ Q+ E VNV T ++ Q+N
Sbjct: 192 NTNNNNNNNNTRERSKDYQRLKHEYVNVLT--ELQILRQRN 230
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 565 CLTSNDSPVSTFTVSPMGCCKGSLVSLLLFALESFSPV 452
CLT +P +T +V+ C+G V+L A +SF PV
Sbjct: 224 CLTVQYAPNATISVNTTLVCQGDHVALTCTAGDSFPPV 261
>SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +3
Query: 324 QLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETSEP 503
QLE V + +PT +++K AG L N TG+ DSNA + + P
Sbjct: 685 QLENGNVSSIGKI-GKPTGSEAMKTKSNAG-PLDSNAMKTESNTGQLDSNAMKTESNTVP 742
Query: 504 LQQPIGETVNVETGESFEVKHQ--QNCQTTTNE-TDDDKLAEEISKQ 635
L G G + +V + NE KLAE++ K+
Sbjct: 743 L----GSNAMKTKGNTIQVANNTIPTASDAANEKAKAAKLAEDLEKE 785
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 660 HLSNPYH*FVLKFLQPVYHHQFHLLLFDS 574
H +PY+ + + QP +HHQ+H LL S
Sbjct: 938 HYHHPYYPY---YHQPYHHHQYHQLLISS 963
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 444 NQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAE- 620
+Q + +++A+ E S ++ + V+ TGES E+KH+ + + ++ + + +
Sbjct: 733 DQPISDHEADADEKDEKSH-MKNALVTIVDSATGESQEMKHKIHTLAESLKSVQESVCDL 791
Query: 621 EISKQINDMDLKDDKVDE 674
EI + +DL++ K +E
Sbjct: 792 EIERDNLQLDLEESKKNE 809
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 429 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKH--QQNCQTTTNETD 602
N N N + ++N++N+K+T+ + T T + + + QQ TTT T
Sbjct: 860 NSNNGNNKNNSNNNNSSNSKKTTTTVITTTATTATTTTTATAKKQQQLQQKTTTTTKTTT 919
Query: 603 DDKLAE 620
K A+
Sbjct: 920 TTKKAK 925
>SB_14448| Best HMM Match : BACK (HMM E-Value=3.9e-10)
Length = 369
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 421 RLNPANPVTLTDFCIVGSSLRCSVPPTFSFSSW 323
RL P +L + + SS +CSV PT ++SW
Sbjct: 284 RLQPGIIASLGNQTVTDSSWKCSVHPTSGWTSW 316
>SB_58648| Best HMM Match : Helicase_C (HMM E-Value=2.2e-14)
Length = 679
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 302 NICSREARIITCFLREFSNEFYVICEDILDF*VVWKDNEL 183
NIC AR I L E N+ V CE ++D + DNEL
Sbjct: 580 NIC--HAREIVVMLAEVFNDIDVSCEQMVDMRLGTSDNEL 617
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3
Query: 102 ANLQDIAENVYTIQEVIDEITNDRQRKKLVVL 197
A + AE YT+Q + DE ND+ R+ L L
Sbjct: 2256 ARQAEFAERGYTVQRLEDEADNDKLRRDLAAL 2287
>SB_40632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 471 NANNNKETSEPLQQPIGETVNVETGE--SFEVKHQQNCQTTTNETDDDKLAEEISKQIN 641
N+N+ +P P G+TV+V+ E S K +NC T + + ++ ++N
Sbjct: 647 NSNSQNFVKQPPAIPSGKTVDVDVKEKSSLSRKDFENCNNVTGKDRQPRAVSFVTTRLN 705
>SB_21841| Best HMM Match : WD40 (HMM E-Value=0.00078)
Length = 360
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +3
Query: 426 PNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNET-- 599
P + N N++ KD L+ P +T ++ +V HQ + T +T
Sbjct: 275 PLWTNENEDYS-KDPEQKRRASNETGLEAPKKKTKVIDIRHDGDVSHQTEAKKTGTKTED 333
Query: 600 DDDKLAEEISKQI-NDMDLKDDKVDEL 677
+DDK E ++ I +D + ++K++ L
Sbjct: 334 EDDKGDESSAETIEDDSETIEEKLNSL 360
>SB_16232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 302 NICSREARIITCFLREFSNEFYVICEDILDF*VVWKDNEL 183
NIC AR I L E N+ V CE ++D + DNEL
Sbjct: 393 NIC--HAREIVVMLAEVFNDIDVSCEQMVDMRLGTSDNEL 430
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/78 (23%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 444 NQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAE- 620
+Q + +++A+ E S ++ + V+ TGES E+KH+ + + ++ + + +
Sbjct: 711 DQPISDHEADADEKDEKSH-MKNALVTIVDSATGESQEMKHKIHTLAESLKSVQESVCDL 769
Query: 621 EISKQINDMDLKDDKVDE 674
EI + +DL++ K +E
Sbjct: 770 EIERDNLQLDLEESKKNE 787
>SB_7981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +3
Query: 435 ENANQETG-----EKDSNANNNKETSEPLQQPIGETVNVETGE 548
E NQE G E++ N +E E + Q GE VN E GE
Sbjct: 25 EEVNQEEGEEVNEEEEGKEMNEEEEGEEVNQEEGEEVNQEEGE 67
>SB_39210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 378
Score = 28.7 bits (61), Expect = 5.2
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +3
Query: 96 RAANLQDIAENVYTIQEVIDEITNDRQRKKLVVLPYDLKVKDVFAD--NIKFITEFSKKT 269
R N +D+ N+ I + ++ + R + V +L AD I F K
Sbjct: 86 RVRNDEDLLLNINGIDLIAAKVKSHRGCRSTYVAKRNLSFAVDGADMYTIAFTNLMDKIL 145
Query: 270 GDYSSLSATDIKVMALTYQLEKEKVG 347
+ S A D+K++ L+YQ E E +G
Sbjct: 146 PEIQSDCAVDMKIVLLSYQDELEGLG 171
>SB_4344| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1080
Score = 28.7 bits (61), Expect = 5.2
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Frame = +3
Query: 318 TYQLEKEKVGGTEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKETS 497
T + KEK G + KD+ K + G E+A + EKD + +
Sbjct: 542 TEEGNKEKEKGDDKAKDKTEESKDGEKKEEIGDKKSDKEESAEKNESEKDDDDGKEDDKG 601
Query: 498 EPLQQPIGETVNVETGESF---EVKHQQNCQTTTNETDDDKLAE--EISKQINDMDLK-- 656
+ + G + + GE EV + + ++ +E D +K E + +K+ D D +
Sbjct: 602 DKDDEDGGGEKDADEGEKMAEKEVDKEGDKESEKSEKDGEKGDEKKDDAKKQEDEDAEEG 661
Query: 657 -DDKVDE 674
DD DE
Sbjct: 662 ADDGYDE 668
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +3
Query: 111 QDIAENVYTIQEVIDEITNDRQRKKLVVLPYDL-KVKDVFADNIKFITEFSKKTGDYSSL 287
Q++A+ +Q+ I EI +R +L K ++ + F+ E +YS+
Sbjct: 74 QNVAKGFQNLQKGIQEIKKGAERDNAAAKHEELVKQEEAIKKWVDFLIE------EYSTG 127
Query: 288 SATDIKVMALTYQLEKEKVGGTEHLKDEPTMQKSVKVTGL 407
TDI + +E + V + L EPT+ ++VK+ L
Sbjct: 128 GTTDITPLPW---IESDPVFTLKKLFKEPTISENVKINDL 164
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/59 (22%), Positives = 25/59 (42%)
Frame = +3
Query: 417 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTN 593
N PN++ + + T + + T+EP+ + T T + + N + TTN
Sbjct: 3083 NSKPNHKKSTRPTTDNKQQSQPQTTTAEPITKTTSTTAKPTTNNNSKPTTNNNSKPTTN 3141
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 28.3 bits (60), Expect = 6.9
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 4/88 (4%)
Frame = +3
Query: 429 NYENANQETGEKDSNANNNKETSEPLQQ--PIGETVNVETGESFEVKHQQNCQT--TTNE 596
N +N + G S + ++ EP + P + + E E + N + E
Sbjct: 262 NRDNRRDDRGRNRSRKDEDELEEEPYVEDDPDADDEKEKEKEKLEREKSSNAKEKKADPE 321
Query: 597 TDDDKLAEEISKQINDMDLKDDKVDELM 680
DDD EE+ K IN L + VD L+
Sbjct: 322 NDDDVSKEEVKKSIN---LANQNVDMLV 346
>SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)
Length = 269
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +3
Query: 417 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGES 551
N P + +Q +K A + SEP ++P+GE V E+
Sbjct: 56 NEQPKHVPTSQPPNDKADGAGCEQVESEPREEPVGEEAKVSHQET 100
>SB_56211| Best HMM Match : SRP19 (HMM E-Value=0.51)
Length = 488
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 448 RKQVRKTLMQTITKRPVNLYNNP*ERL*MLKLESHLKSNTNKTVKQQQMKLMMINWLKKF 627
RK R T+ + L N R + L+ HL++ TV+ Q +M W+ +
Sbjct: 104 RKDSRDFEQDTLLRINTTLLRNLEARYLLPTLKKHLETPERNTVQDSQSSMMGQQWMTQM 163
Query: 628 QNKS 639
N++
Sbjct: 164 TNQT 167
>SB_52883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1434
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Frame = +3
Query: 330 EKEKVGGTEHLKDEPTMQK---SVKVTGLAGFN----LHPNYENAN 446
E +K GG EHL D P ++ S +AG N LHP +AN
Sbjct: 199 EGDKKGGDEHLSDAPAKEEYATSCSDLNIAGINCRIILHPPKTDAN 244
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3
Query: 417 NLHPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQN 575
N + N N N D+N++NN + + N E G E+K +N
Sbjct: 608 NNNNNNNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKN 660
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/66 (24%), Positives = 36/66 (54%)
Frame = +3
Query: 489 ETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEISKQINDMDLKDDKV 668
E P + I V+++TGE+ +KH + + + D+++L E + + D +L D+++
Sbjct: 426 ERDTPDEIRIEGDVDIDTGENVYLKHVEGKEHLGHPCDEEELLETRNVR-EDKELDDNEM 484
Query: 669 DELMVK 686
+ + K
Sbjct: 485 VQYLEK 490
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 351 TEHLKDEPTMQKSVKVTGLAGFNLHPNYENANQETGEKDSNANNNKET 494
T L D PT + +++ +PN E +QETG + NN +T
Sbjct: 2541 TTALNDSPTKEGTIESVSNQS-QANPNTEKKSQETGPDVNKVENNIKT 2587
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/81 (24%), Positives = 35/81 (43%)
Frame = +3
Query: 447 QETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDDKLAEEI 626
++ E S +E+ + + T + E+K + CQ NETD +L EE+
Sbjct: 1366 EQLNESQSELETTRESCTSMNSDLERTCDELQIAQNELK-ELRCQLEKNETDKGQLEEEL 1424
Query: 627 SKQINDMDLKDDKVDELMVKV 689
K + + K D + L +V
Sbjct: 1425 IKTKDALLEKYDAMLSLQRRV 1445
>SB_20267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/61 (22%), Positives = 26/61 (42%)
Frame = +3
Query: 429 NYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETDDD 608
NY N + + D+N NN+K + G N + ++ + + N N ++D
Sbjct: 211 NYNYDNNDNNDNDNNDNNDKNDNNDNNDNNGNNDNYDNNDNND--NNDNNDNNDNNDNND 268
Query: 609 K 611
K
Sbjct: 269 K 269
>SB_11166| Best HMM Match : CARD (HMM E-Value=0.001)
Length = 720
Score = 27.9 bits (59), Expect = 9.1
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +3
Query: 423 HPNYENANQETGEKDSNANNNKETSEPLQQPIGETVNVETGESFEVKHQQNCQTTTNETD 602
H E+ G +D KE LQ+ G E+ S Q++C++ +TD
Sbjct: 182 HDVVESIESHPGYEDVQRARTKENGNMLQEQTG----TESKGSLAFPRQESCKSEVEKTD 237
Query: 603 DDKLAEEISKQIN--DMDLKDDKVDEL 677
+ + S+ N D D+ + +E+
Sbjct: 238 EPDVRYFPSEDSNPPDEDITSETPEEM 264
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,951,264
Number of Sequences: 59808
Number of extensions: 402948
Number of successful extensions: 1583
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1538
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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