SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0933
         (680 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protei...   241   1e-62
UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e...   134   2e-30
UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25...    94   2e-18
UniRef50_A0Q3I3 Cluster: Sensor protein; n=1; Clostridium novyi ...    37   0.40 
UniRef50_Q23JY6 Cluster: Putative uncharacterized protein; n=1; ...    37   0.40 
UniRef50_Q8I327 Cluster: Putative uncharacterized protein PFI061...    35   1.6  
UniRef50_Q5YY86 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21...    35   2.1  
UniRef50_Q5KP57 Cluster: ER organization and biogenesis-related ...    35   2.1  
UniRef50_Q9PR00 Cluster: Uncharacterized protein UU144; n=1; Ure...    35   2.1  
UniRef50_A6KZV8 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_A4YQ81 Cluster: Putative uncharacterized protein; n=1; ...    34   2.8  
UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, wh...    34   2.8  
UniRef50_A0GZD5 Cluster: Putative uncharacterized protein; n=2; ...    34   3.7  
UniRef50_Q3IDV8 Cluster: Putative flagellar hook-associated; n=2...    33   4.9  
UniRef50_Q1QUD7 Cluster: Response regulator receiver domain prot...    33   4.9  
UniRef50_Q96GC5 Cluster: 39S ribosomal protein L48, mitochondria...    33   4.9  
UniRef50_Q12753 Cluster: Transcriptional activator HAA1; n=2; Sa...    33   4.9  
UniRef50_Q7NPW0 Cluster: Competence protein F; n=1; Chromobacter...    33   6.4  
UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium...    33   6.4  
UniRef50_Q54LH5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q8TZS7 Cluster: Adenosylmethionine-8-amino-7-oxononanoa...    33   6.4  
UniRef50_Q5BVU1 Cluster: SJCHGC06557 protein; n=1; Schistosoma j...    33   8.5  

>UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protein
           E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived
           virus envelope protein E25 - Orgyia pseudotsugata
           multicapsid polyhedrosis virus (OpMNPV)
          Length = 229

 Score =  241 bits (589), Expect = 1e-62
 Identities = 114/188 (60%), Positives = 149/188 (79%), Gaps = 2/188 (1%)
 Frame = +2

Query: 104 WTNA-LNLNSLTEASPSLGQSSESVESD-ENKRLNVKLNNARVANLRIAHGDNKLSQMYI 277
           W N  LNLNSLTE+SPSL QSS+SV+ D + ++LNVKL N ++  +R+AHGDNK+SQ+Y+
Sbjct: 18  WYNGKLNLNSLTESSPSLAQSSDSVQVDPQTEQLNVKLGNNKMTYMRVAHGDNKVSQVYV 77

Query: 278 AEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFK 457
           AEKP+S+DDI K+G+ +VG NS+F+GTVYD GV+SPNA   S++VT+TR TANFD+KE+K
Sbjct: 78  AEKPMSMDDIEKQGNARVGANSLFIGTVYDQGVRSPNAPGASNDVTVTRTTANFDVKEYK 137

Query: 458 SMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPNAGPLSEREVRELRKSNCTLVYTKN 637
           +MFIV KG+ P K  +++ ML F VD + VCL+D NA PLSER    L  S CTLVYT+N
Sbjct: 138 NMFIVVKGLPPAKMTKEDNMLCFTVDGLHVCLVDANAAPLSERVFARLPPSACTLVYTRN 197

Query: 638 EAAQQVLL 661
            AAQQ+LL
Sbjct: 198 SAAQQLLL 205


>UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e25
           - Helicoverpa armigera NPV
          Length = 230

 Score =  134 bits (323), Expect = 2e-30
 Identities = 75/188 (39%), Positives = 112/188 (59%), Gaps = 8/188 (4%)
 Frame = +2

Query: 110 NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKP 289
           N LN +SL ++S   GQSSES+  +   +L +K N+ R+  +RI HGDNK+S++ +AE+P
Sbjct: 22  NKLNFDSLNDSS---GQSSESIRENNQGQLTLKFNSPRIKTMRILHGDNKISKVCVAERP 78

Query: 290 LSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS--------PNAASTSSNVTMTRGTANFDI 445
           L+  +I+ EG+  VG N +F+GT+ +    S          +A +S   T  R TANFDI
Sbjct: 79  LTYSEIIDEGNRTVGANCVFMGTISEPSQTSTLNQQQQQQQSAGSSLPTTANRVTANFDI 138

Query: 446 KEFKSMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPNAGPLSEREVRELRKSNCTLV 625
           K+FK+ FIVFK +   K  E   M+R+E D M+ CLID  +  +   ++RE+  S   +V
Sbjct: 139 KQFKNTFIVFKNVEMIKIKESANMVRYESDGMVYCLIDSQSTTVP--DLREV--SYPIVV 194

Query: 626 YTKNEAAQ 649
           YT N   Q
Sbjct: 195 YTTNANVQ 202


>UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25 -
           Adoxophyes orana granulovirus (AoGV)
          Length = 217

 Score = 94.3 bits (224), Expect = 2e-18
 Identities = 62/186 (33%), Positives = 102/186 (54%), Gaps = 1/186 (0%)
 Frame = +2

Query: 104 WTN-ALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIA 280
           W N  LN NSL  +S S G   +S++       NV  NN +  N+RIA+G+N  S++   
Sbjct: 19  WVNDKLNANSLNTSSESSG---DSIQFTPEGNANVIFNNTKSKNVRIAYGENNFSKIVAL 75

Query: 281 EKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKS 460
           E P+  + I++ G +K G N+I LG + +      N  +++ N   TR + N  IK+FK+
Sbjct: 76  ETPIRHEQIIEHG-DKAGANTICLGIIKEN--LGSNVGNSNVN---TRFSNNLTIKQFKN 129

Query: 461 MFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPNAGPLSEREVRELRKSNCTLVYTKNE 640
           +FI FKG+   +   +  M+R+EV+ M+  L+D +   + +  +R++    C LV   N 
Sbjct: 130 LFITFKGLDYVEIDSNMYMVRYEVNKMVYALLDASNSTIPDL-LRDVSYPICVLV--NNS 186

Query: 641 AAQQVL 658
           +AQ VL
Sbjct: 187 SAQLVL 192


>UniRef50_A0Q3I3 Cluster: Sensor protein; n=1; Clostridium novyi
           NT|Rep: Sensor protein - Clostridium novyi (strain NT)
          Length = 779

 Score = 37.1 bits (82), Expect = 0.40
 Identities = 26/84 (30%), Positives = 43/84 (51%)
 Frame = -3

Query: 585 RSDSGPALGSIKHTIMLSTSNRNIPLSSTVLVGVIPLNTINMDLNSLISKFAVPRVMVTL 406
           R      LG+I   I+   +  NIP+ +T      P+     D   +I+KF +P    TL
Sbjct: 280 REKEAKVLGNIAIKILKGENPNNIPIINT------PIGNYKFDYE-IITKFDIPS---TL 329

Query: 405 LDVLAAFGDLTP*SYTVPRKMLLV 334
           L   ++F +L P SYT+P+ ++L+
Sbjct: 330 LPYKSSFINLKPLSYTIPKILVLL 353


>UniRef50_Q23JY6 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 3032

 Score = 37.1 bits (82), Expect = 0.40
 Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 5/160 (3%)
 Frame = +2

Query: 143  SPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYI-----AEKPLSIDDI 307
            SP+  +S +  +   +KR   + N  ++ N         +S  Y       + P  +D+I
Sbjct: 1558 SPTELKSIQYYDGTNSKRTPSQTNYNQIGNYAQMTSRTNVSMQYQDGDIKGQSPYRLDEI 1617

Query: 308  VKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGIT 487
                SNK+GT+       Y   +K  + A  + N  +   T NF   E K   I F+G  
Sbjct: 1618 ----SNKLGTSEYKQENKYSMPLKRMDIADITYNKAIILKTKNFTTDEEKGRVIAFEGSH 1673

Query: 488  PTKTVEDNGMLRFEVDSMIVCLIDPNAGPLSEREVRELRK 607
               T  D+  L  E   +I   IDP    L  ++  E  K
Sbjct: 1674 FLPTELDSNYL--EKKGIIKKKIDPKKRELENQQSMEKGK 1711


>UniRef50_Q8I327 Cluster: Putative uncharacterized protein PFI0610w;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFI0610w - Plasmodium falciparum (isolate 3D7)
          Length = 305

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 43/185 (23%), Positives = 76/185 (41%), Gaps = 14/185 (7%)
 Frame = +2

Query: 119 NLNSLTEASPSLGQSSESVESDENKRLNVKL-NNARVANLRIAHGDNKLSQMYIAEKPLS 295
           N+NSL   S S    + ++ +D+NK  N    NNA   +L +    N + +    +    
Sbjct: 59  NINSL---SSSYILDNSNINNDDNKNNNFSFQNNASNNSLNLQSSSNLIFEKKTVDSFGK 115

Query: 296 IDDIVK----------EGSNKVGTNSI--FLGTVYDYGVKSPNAASTSSNVTMT-RGTAN 436
           +DD  K          + +NK+G N +  ++  +      +PN+    +N T   +   N
Sbjct: 116 VDDNNKKTIPSVNNKEDSNNKIGLNKMKNYIRNILTINSNTPNSTYDKNNGTNDHKNNPN 175

Query: 437 FDIKEFKSMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPNAGPLSEREVRELRKSNC 616
            D  + KS  ++ +      +      L+  + S      D N   LSE + RELR+   
Sbjct: 176 KDSNDQKSKIVIQEITFNDVSSSSQNTLQRNIIST-----DDNDSYLSEEKKRELRRKRF 230

Query: 617 TLVYT 631
            +V T
Sbjct: 231 GVVNT 235


>UniRef50_Q5YY86 Cluster: Putative uncharacterized protein; n=1;
           Nocardia farcinica|Rep: Putative uncharacterized protein
           - Nocardia farcinica
          Length = 306

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
 Frame = -2

Query: 616 AVGFAQFAHLSFGQRPR--VGVDQAHNHAVDFESQHTIVFYSFSGR 485
           A GFA+ A  +F  RPR  VG+D  H H V    Q  +V      R
Sbjct: 191 AAGFAEIAAAAFRPRPRPTVGLDHLHQHTVSVAEQAALVLEMLKAR 236


>UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21.9;
           n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
           protein F12P21.9 - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 97

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = +2

Query: 302 DIVKEGSNKVGTNSIFLGTVYDYGVKSP-------NAASTSSNVTMTRGTANFDIKEFKS 460
           D +KE   +VGT+SIF  +     + SP       + +S S++ + T G   F + E + 
Sbjct: 31  DTIKEEEREVGTDSIFPSSFNSKKISSPFTSPYSSSVSSASASASCTSGLNKFPVTENRG 90

Query: 461 MFIVFK 478
            F VFK
Sbjct: 91  SFPVFK 96


>UniRef50_Q5KP57 Cluster: ER organization and biogenesis-related
           protein, putative; n=2; Filobasidiella neoformans|Rep:
           ER organization and biogenesis-related protein, putative
           - Cryptococcus neoformans (Filobasidiella neoformans)
          Length = 836

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = +2

Query: 107 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLN-NARVANLRIAHGDNKLSQMYIAE 283
           T A ++N  + A   L ++++++E++E  RL  K N +A++AN +     N L  +  + 
Sbjct: 707 TPAADVNR-SAAVADLRKAAQALEAEEEARLFHKDNVDAKIANWKSGKETN-LRALIASL 764

Query: 284 KPLSIDDIVKEGSNKVGTNSI 346
             +  DDIVKEG  KVG + +
Sbjct: 765 DTVLWDDIVKEGGLKVGMHEL 785


>UniRef50_Q9PR00 Cluster: Uncharacterized protein UU144; n=1;
           Ureaplasma parvum|Rep: Uncharacterized protein UU144 -
           Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
          Length = 243

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = +2

Query: 188 NKRLNVKLNNARVANLRIAHGD-NKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVY 364
           N+  +VKL N ++AN+ + + + N + Q +I+ + LS +DI K  ++KV      +G  +
Sbjct: 13  NRDYDVKLTNVKIANIALNNDNVNNIEQNHISFRHLSTNDI-KNSNDKVEA-KFSIGLGF 70

Query: 365 DYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDN 511
           D   K  N A    +   T      DI +   + + F      + VE+N
Sbjct: 71  DISEKLKNIAFKKLD---TNTNKLIDISDPTILRLTFYEYNKDQKVENN 116


>UniRef50_A6KZV8 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative
           uncharacterized protein - Bacteroides vulgatus (strain
           ATCC 8482 / DSM 1447 / NCTC 11154)
          Length = 438

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +2

Query: 155 GQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVG 334
           G  S S++  +N ++ +KL  AR   + IA     L + YI  K  S+DD++    N   
Sbjct: 68  GSCSASLKMTDNAQIEMKLPPARYTIVAIAG----LGEEYIVPKDPSLDDVIVMKENNRS 123

Query: 335 TNSIFLGT 358
           + ++ +GT
Sbjct: 124 SRALMMGT 131


>UniRef50_A4YQ81 Cluster: Putative uncharacterized protein; n=1;
            Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
            protein - Bradyrhizobium sp. (strain ORS278)
          Length = 4387

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
 Frame = +2

Query: 218  ARVANLRIAHGDNKLS-QMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYG--VKSPN 388
            A+   L +A GD+ LS +   +  PLS+  +  +G N VGT S     V D G  + +P 
Sbjct: 2164 AQAGALFVASGDSSLSIKTGPSATPLSVQFVTSKGGNVVGTVSGAATAVADLGRVILAPG 2223

Query: 389  AASTSSNVTMTRGTAN 436
            A  T+  +TM +G+A+
Sbjct: 2224 ANITAKALTM-QGSAS 2238


>UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_44,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1155

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 2/146 (1%)
 Frame = +2

Query: 110 NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKL-SQMYIAEK 286
           N +  N L E +  + Q +  +++ E +R   KLNN    NL+I + +NKL +  Y  +K
Sbjct: 544 NLIQQNKLQEQNVQIQQLTVQIQNMEEQRNEFKLNNQIFQNLKIKYVNNKLHNNQYPFKK 603

Query: 287 PL-SIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSM 463
            + +   I    S+K+           D  + +      +++  +       +I   +  
Sbjct: 604 QIKNYKSIRPIQSSKISEIQALQSAHQDLNIANNKLIEENNSFQINHDQIAIEINNLQEQ 663

Query: 464 FIVFKGITPTKTVEDNGMLRFEVDSM 541
             + K  T  K  E N  L  +++ +
Sbjct: 664 CRIEKE-TNQKISEQNQQLSSQIEQL 688


>UniRef50_A0GZD5 Cluster: Putative uncharacterized protein; n=2;
           Chloroflexus|Rep: Putative uncharacterized protein -
           Chloroflexus aggregans DSM 9485
          Length = 306

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = -3

Query: 606 LRNSRTSRSDSGPAL-GSIKHTIMLSTSNRNIPLSSTVLVGVIPLNTINMDLNSLISKFA 430
           L    ++ + +G A+  +I+ T  + T    + ++ + LVG   L + N +L +L ++FA
Sbjct: 48  LATPTSAAAPAGSAIPAAIRQTAAIDTYRMQLTINGSGLVGGFNLGSTNTELLALDARFA 107

Query: 429 VPRVMVTLLDVLAAF 385
              V  TL   LAAF
Sbjct: 108 GADVSFTLRGFLAAF 122


>UniRef50_Q3IDV8 Cluster: Putative flagellar hook-associated; n=2;
           Alteromonadales|Rep: Putative flagellar hook-associated
           - Pseudoalteromonas haloplanktis (strain TAC 125)
          Length = 670

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
 Frame = +2

Query: 182 DENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTV 361
           +E  +  +KLN+   AN+ +A G  +   + +A    + DDI   GS  +   S+   T 
Sbjct: 415 NEGDKFQIKLNSEAAANITLATGRGE--DLALASPIRTADDINNTGSGAISAGSVSSVTA 472

Query: 362 YDYGVKSPNA-ASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTV 502
             +   +P A A+    +    GT ++ I +     +      P K V
Sbjct: 473 GGFTTTTPPALANGDITIVKAAGTNDYLISDGNGANVPITIAPPGKNV 520


>UniRef50_Q1QUD7 Cluster: Response regulator receiver domain
           protein; n=1; Chromohalobacter salexigens DSM 3043|Rep:
           Response regulator receiver domain protein -
           Chromohalobacter salexigens (strain DSM 3043 / ATCC
           BAA-138 / NCIMB13768)
          Length = 678

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
 Frame = -3

Query: 552 KHTIMLSTSNRNIPLSSTVLVGVIPLNTINMDLNSLISKFAVPRVMVTLLDVLAAFGDLT 373
           +H  MLS + R + +S+       P   +  DL +++S   V RVM TLLD   A   L 
Sbjct: 76  QHLRMLSRATRRVLVSAATQTR--PARILTSDLPAVLSHDDVERVMTTLLDDYYAMDSLV 133

Query: 372 P*SYTVPRKM--LLVPTLLE----PSLTMSSIDSGFSAIYIWLNLLSP 247
              + +P  M    VP  L     P     +   G  ++  W    SP
Sbjct: 134 SRLFVMPEGMRAFSVPEPLHETALPPYQRDATPQGTDSVVWWPRASSP 181


>UniRef50_Q96GC5 Cluster: 39S ribosomal protein L48, mitochondrial
           precursor; n=25; Euteleostomi|Rep: 39S ribosomal protein
           L48, mitochondrial precursor - Homo sapiens (Human)
          Length = 212

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
 Frame = +2

Query: 203 VKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS 382
           + L+ +R    +  HG  K   +  AE+P       K+   KV   +I LGT Y+YGV  
Sbjct: 40  ILLSISRPYKTKPTHGIGKYKHLIKAEEP-------KKKKGKVEVRAINLGTDYEYGVL- 91

Query: 383 PNAASTSSNVTMTRGTANF--DIKEFKSMFIVFKGITPTKTVE 505
            N   T+ ++T+    A +  ++    S+ +      PTKT+E
Sbjct: 92  -NIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIE 133


>UniRef50_Q12753 Cluster: Transcriptional activator HAA1; n=2;
           Saccharomyces cerevisiae|Rep: Transcriptional activator
           HAA1 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 694

 Score = 33.5 bits (73), Expect = 4.9
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
 Frame = +2

Query: 161 SSESVESDENKRLNVKLNNARVANLRIAHGD--NKLSQMYIAEKPLSIDDIVKEGSNKVG 334
           SS S+ +  + RLN+   N  V    + H    + +S   + E  + +++ +    + VG
Sbjct: 238 SSVSLPAKADSRLNMMDKNNSVGLDLLGHSKRISPISNSRVGEVSVPLEEYIPSDIDGVG 297

Query: 335 TNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDNG 514
             +     VYD+        + S+  T   G + FDI +     I  K  + T ++  NG
Sbjct: 298 RVTDKSSLVYDWPFDESIERNFSTTATAATGESKFDIND-NCNRINSKSYSKTNSMNGNG 356

Query: 515 M 517
           M
Sbjct: 357 M 357


>UniRef50_Q7NPW0 Cluster: Competence protein F; n=1; Chromobacterium
           violaceum|Rep: Competence protein F - Chromobacterium
           violaceum
          Length = 222

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 510 MVCCDSKSTA*LCA*STPTRGRCPNERCANCANPT 614
           ++C D+++   LCA       R P+ERC  CA PT
Sbjct: 7   VLCGDARAREGLCADCRAMLPRMPDERCPRCAEPT 41


>UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium
            falciparum 3D7|Rep: Ser/Thr protein kinase - Plasmodium
            falciparum (isolate 3D7)
          Length = 4044

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 15/66 (22%), Positives = 33/66 (50%)
 Frame = +2

Query: 143  SPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGS 322
            S S+    +    +E K +N  +NN++  +  ++  +NK+  M   +  +S+ D++K   
Sbjct: 3017 SNSINMKEKMSRINETKNINENINNSKNIS-EMSETNNKMDNMETRKNTISLQDVIKNNL 3075

Query: 323  NKVGTN 340
            N +  N
Sbjct: 3076 NNLQKN 3081


>UniRef50_Q54LH5 Cluster: Putative uncharacterized protein; n=1;
            Dictyostelium discoideum AX4|Rep: Putative
            uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1233

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = -3

Query: 630  VYTRVQLDLRNSRTSRSDSGPALGSIKHTIMLSTSNRN---IPLSSTVLVGVIPLNTINM 460
            +Y  +Q ++R++R S  +S P   SI    + + +N N   IPLS  V+  ++P++ +N+
Sbjct: 1170 IYLSLQ-NIRHNRLSSKESIPLRISIVEQFLNNNNNNNVTIIPLSKFVIFNILPVDNVNL 1228


>UniRef50_Q8TZS7 Cluster: Adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase; n=2; Pyrococcus|Rep:
           Adenosylmethionine-8-amino-7-oxononanoate
           aminotransferase - Pyrococcus furiosus
          Length = 459

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 24/88 (27%), Positives = 40/88 (45%)
 Frame = +2

Query: 203 VKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS 382
           + + +ARV+NL     D+K    +  E  ++I D+ K    K     IF     D  +  
Sbjct: 313 INVKHARVSNLNAVIVDSKTIYFFTFEPFVTITDVDKNIGRK-----IFANKPIDLQIVL 367

Query: 383 PNAASTSSNVTMTRGTANFDIKEFKSMF 466
             AA+   N T TR T  F+   ++S++
Sbjct: 368 GKAAAKFVNATFTRDTMKFNGNIYRSIW 395


>UniRef50_Q5BVU1 Cluster: SJCHGC06557 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06557 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 228

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +2

Query: 191 KRLNVKLNNARVANLRIAHGDNK-LSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 367
           +RLNVKLNN +  +  I  GD + + ++ IA         V + + K+ TN+  +  V D
Sbjct: 82  RRLNVKLNNIQPED--IMEGDKETVHELLIAINDYFTPKAVNKSTKKLFTNNNHIHDV-D 138

Query: 368 YGVKSPNAASTSSNV-TMTRGT 430
           Y + S    S  SN+ T TR T
Sbjct: 139 YKLDSNGRTSAWSNMSTSTRRT 160


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,901,138
Number of Sequences: 1657284
Number of extensions: 13770634
Number of successful extensions: 40415
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 38873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40395
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -