Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0933
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.9  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   6.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.7  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   6.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.9  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   8.9  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 626 TPECSWICAIRAPLVRTAAPRWGRSSTQSCCR 531
           T  C  + A+    +R AAP W  + T   CR
Sbjct: 788 TSRCRLLAAVADSTMRYAAPVWHGALTNRECR 819


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +3

Query: 315 RAPTKWALTAFFWAPYTTMELNH 383
           + P+ W L  +FW  +  + ++H
Sbjct: 537 KLPSSWDLLPYFWFAFHWLAMSH 559


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 615  QLDLRNSRTSRSDSGPALGSIKHTIMLSTSNRNI 514
            QL   +  +S S  GP    I HT  LS+++ +I
Sbjct: 1337 QLSQSSHHSSSSHGGPTPSIISHTPSLSSASGSI 1370


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 267 WLNLLSPCAMRKLATRALFSFTFNRLFSSDSTDSLLCPK 151
           WL   S  A++K A+    S  F+R+   D      CP+
Sbjct: 100 WLVTASQSALQKFASTDWMSNPFDRVVCGDFAGPNGCPR 138


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 329 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 460
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 329 VGTNSIFLGTVYD-YGVKSPNAASTSSNVTMTRGTANFDIKEFKS 460
           VG  S  +  V D     SP + S   N +MT+  +  DIKE  S
Sbjct: 635 VGIGSTSVDAVGDAMASSSPASCSPEQNGSMTKTRSYSDIKEATS 679


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 608 ICAIRAPLVRTAAPRWGRSSTQSCCR 531
           + A+ A ++R  AP W  ++    CR
Sbjct: 789 LAAVAASIIRYGAPVWTEATDLQWCR 814


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 735,861
Number of Sequences: 2352
Number of extensions: 16022
Number of successful extensions: 46
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)