Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0933
(680 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical ... 32 0.33
Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical p... 31 1.0
Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical pr... 31 1.0
U50191-8|AAK31551.3| 296|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical ... 29 3.1
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75530-8|CAA99792.2| 405|Caenorhabditis elegans Hypothetical pr... 29 4.1
U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical p... 29 4.1
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 28 5.4
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 28 5.4
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 27 9.4
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 27 9.4
U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily ass... 27 9.4
>AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical
protein M04G7.2 protein.
Length = 550
Score = 32.3 bits (70), Expect = 0.33
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +2
Query: 131 LTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMY-IAEKPLSIDDI 307
LT SPS ++S+S+E + ++ N ++ A R A+ KL + + ++ + +++DD
Sbjct: 209 LTADSPSSRRTSKSLEENSSETTNDSISLADDEETREAY--RKLFKDFAMSSQKMTLDDF 266
Query: 308 VKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNV 412
+E SN G L TV+++ V N + SN+
Sbjct: 267 KQEFSNLPGDPPSDLCTVFNHPVN--NKKNRYSNI 299
>Z81527-14|CAB04278.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 197 LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTV 361
LN+ L + L DN + + + ++ D ++K +G N NS F+G +
Sbjct: 145 LNLNLQPTQTYTLESPTNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNL 201
Query: 362 YDYGVKSPNAASTSSNVT 415
YDY V SP +S N T
Sbjct: 202 YDY-VNSPTLMKSSGNST 218
>Z79753-8|CAB02089.2| 506|Caenorhabditis elegans Hypothetical
protein F35E12.8 protein.
Length = 506
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Frame = +2
Query: 197 LNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVK-----EGSNKVGTNSIFLGTV 361
LN+ L + L DN + + + ++ D ++K +G N NS F+G +
Sbjct: 145 LNLNLQPTQTYTLESPTNDNVVINVALVDQIGKTDIVIKLIYVYDGPN---VNSRFVGNL 201
Query: 362 YDYGVKSPNAASTSSNVT 415
YDY V SP +S N T
Sbjct: 202 YDY-VNSPTLMKSSGNST 218
>U50191-8|AAK31551.3| 296|Caenorhabditis elegans Hypothetical
protein T14B4.3 protein.
Length = 296
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/58 (27%), Positives = 23/58 (39%)
Frame = -2
Query: 616 AVGFAQFAHLSFGQRPRVGVDQAHNHAVDFESQHTIVFYSFSGRYTFEYNKHGFKFLD 443
+V F +FG VG QA F+ ++ G F+Y+ H F F D
Sbjct: 38 SVSLLNFNKNAFGLGAAVGAHQAIGDEKLFQKPKALLIIVIDGLENFDYDGHAFNFTD 95
>AC024798-2|AAK29923.1| 352|Caenorhabditis elegans Hypothetical
protein Y48G9A.9a protein.
Length = 352
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 119 NLNSLTEASPSLGQSSESVESDENKRLNVK-LNNARVANLRIAHGDNKLSQMY 274
N N++ E P+ QSS E+D++ R V+ LNN +A ++ G L++ Y
Sbjct: 17 NNNNVNEKRPASAQSSNGTETDDHHRKYVETLNNFIIATEKL--GIEGLAKQY 67
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 107 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 286
TNA LN++T ++ S SSES S + + K + A+ ++ H + + + Y +
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222
Query: 287 PL 292
P+
Sbjct: 223 PI 224
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 107 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 286
TNA LN++T ++ S SSES S + + K + A+ ++ H + + + Y +
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222
Query: 287 PL 292
P+
Sbjct: 223 PI 224
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 107 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEK 286
TNA LN++T ++ S SSES S + + K + A+ ++ H + + + Y +
Sbjct: 163 TNATILNAMTASTSSNDSSSESGVSGVKEAKDEKKKSKIQADEKLRHEERQSTSDYTDDD 222
Query: 287 PL 292
P+
Sbjct: 223 PI 224
>Z75530-8|CAA99792.2| 405|Caenorhabditis elegans Hypothetical
protein C47E8.3 protein.
Length = 405
Score = 28.7 bits (61), Expect = 4.1
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = -3
Query: 363 YTVPRKMLLVPTLLEPSLTMSSIDSGFSAIYIWLN-LLSPCAMRKLATRALFSFTFNRLF 187
Y + + + + T+ E ++ SS++ GF +Y +LN ++S + R F NRL
Sbjct: 275 YLLSQSLQVFLTVWE-TINRSSLEDGFPTMYSYLNDIVSIFTLLASCLRFPIYFCCNRLI 333
Query: 186 SSDSTDSL 163
+ S D+L
Sbjct: 334 HTASVDTL 341
>U50312-11|AAK71353.2| 1217|Caenorhabditis elegans Hypothetical
protein B0222.9 protein.
Length = 1217
Score = 28.7 bits (61), Expect = 4.1
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
Frame = -3
Query: 519 NIPLSSTVLVGVIPLNTINMDLNSLISKFAVPRVMVTLLDVLAAFGDLTP*SYTVPRKML 340
NI + L + +N I +++S I KF+ P++ A S +V +L
Sbjct: 302 NIQKMADTLTSSLSIN-IGKEIDSFIQKFSSPQI-ANFATWTGAIISGAKSSLSVS-DLL 358
Query: 339 LVPTLLEPSLTMSSIDSGFSAIYIWLNLLSPCAMRKLATRALFSF--TFNRLFSSDSTDS 166
++ +L+ LT+ + +SG L+ A+ + A + LF+ N +FS T
Sbjct: 359 ILFNVLDAKLTLLN-NSGE---------LTQVAIEEFAEKKLFATHTIVNAIFSRSLTGF 408
Query: 165 LLCPKLGDASVKE---FKFNAFV 106
L C KLG+ S ++ F F A V
Sbjct: 409 LFCLKLGETSEQDSTNFNFAALV 431
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -1
Query: 632 SCTPECSWICAIRAPLVRTAAPRWGRSSTQSC 537
SC P C C AP+ P+ + TQ C
Sbjct: 131 SCMPACEQSCVAPAPVTVQCVPQCQQKCTQQC 162
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/32 (34%), Positives = 14/32 (43%)
Frame = -1
Query: 632 SCTPECSWICAIRAPLVRTAAPRWGRSSTQSC 537
SC P C C AP+ P+ + TQ C
Sbjct: 132 SCMPACEQSCVAPAPVTVQCVPQCQQKCTQQC 163
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 632 SCTPECSWICAIRAPLVRTAAPRWGR-SSTQSCCRLRIATYHC 507
SC +CS C AP + P+ + S QS C+ T +C
Sbjct: 124 SCNNQCSSSCGNSAPQIVVLQPQQNQCGSCQSSCQQTCPTCNC 166
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 392 ASTSSNVTMTRGTANFD--IKEFKSMFIVFKGIT 487
A+TS+NVT + T NFD +K + V GIT
Sbjct: 133 ATTSTNVTNAKSTTNFDGYLKHISVIAHVANGIT 166
>U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily
assigned gene nameprotein 127 protein.
Length = 862
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -3
Query: 621 RVQLDLRNSRTSRSDSGPALGSIKHTIMLSTSNRNIPLSSTVLVGVIPLNTINMD 457
+++ RNS+ S + S + GS I ++SN N P T+ + ++TI+++
Sbjct: 726 KLESSKRNSQASNAASLDSFGSSTSGISTASSNNNDPSMETLTSKLSHISTISIN 780
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,817,359
Number of Sequences: 27780
Number of extensions: 332273
Number of successful extensions: 1012
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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