Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0932
(712 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 31 0.012
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 25 0.46
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 5.7
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 22 5.7
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 22 5.7
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 22 5.7
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 22 5.7
AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esteras... 22 5.7
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 22 5.7
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 22 5.7
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 5.7
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 9.9
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 9.9
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 30.7 bits (66), Expect = 0.012
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = +3
Query: 150 CNCLPGFTGHLCDS----CESSNAV-FPLCHDIPTEPPCKC 257
C C PGFTG C + C+SS + C D T C C
Sbjct: 47 CTCKPGFTGSNCQNRINLCDSSPCLNGATCQDHTTHYTCHC 87
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 5/41 (12%)
Frame = +3
Query: 150 CNCLPGFTGHLCDSCESSNAVFP-----LCHDIPTEPPCKC 257
CNC GF G C+S + A P +C I C C
Sbjct: 324 CNCKLGFMGRHCESKVNFCATSPCQNGGVCTTIHAGHKCTC 364
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 7/43 (16%)
Frame = +3
Query: 150 CNCLPGFTGHLCD----SCES---SNAVFPLCHDIPTEPPCKC 257
C C PGF G C+ C S SNA C + + C C
Sbjct: 284 CKCPPGFVGPRCEGDINECLSNPCSNAGTLDCVQLVNDYHCNC 326
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 14/54 (25%)
Frame = +3
Query: 138 HRVSCNCLPGFTGHLCD----SCESS--NAVFPL--------CHDIPTEPPCKC 257
++ C C G+TG +CD SC+ + V PL C DI C C
Sbjct: 119 NQYQCLCGVGWTGKVCDVEMVSCKDAALRKVVPLKKLCNNGTCEDIGNSHRCHC 172
Score = 22.6 bits (46), Expect = 3.2
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 5/60 (8%)
Frame = +3
Query: 147 SCNCLPGFTGHLC----DSCESSNA-VFPLCHDIPTEPPCKCDVRGIVDPTRECDEVCEC 311
SC+C G G++C D C C D CKC G V P E D + EC
Sbjct: 245 SCSCPSGTLGYICEINVDDCRPGACHNNGTCLDKVGGFECKCP-PGFVGPRCEGD-INEC 302
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 25.4 bits (53), Expect = 0.46
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 150 CNCLPGFTGHLC 185
C C PGFTG C
Sbjct: 54 CQCQPGFTGKYC 65
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 377 DTYLIQN*MPTDIPYVNTNTHFTFTD 300
+ Y +P D P +NT T ++T+
Sbjct: 62 EVYYHHQTIPQDNPIINTETGLSYTN 87
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 21.8 bits (44), Expect = 5.7
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 180 LCDSCESSNAVF 215
LCD C+S N +F
Sbjct: 523 LCDVCDSVNRIF 534
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 94 KRIYPQVPANGTTSITEYR 150
K +PQVP N T +T R
Sbjct: 489 KMEWPQVPKNATDDLTYLR 507
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 91 LKRI-YPQVPANGTTSITEYR 150
+K+I +PQVP N T +T R
Sbjct: 487 VKKIEWPQVPKNATDDLTYLR 507
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 103 YPQVPANGTTSITEYR 150
+PQVP N T ++T R
Sbjct: 492 WPQVPKNATDNLTYLR 507
>AJ850293-1|CAH64513.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 91 LKRI-YPQVPANGTTSITEYR 150
+K+I +PQVP N T +T R
Sbjct: 487 VKKIEWPQVPKNATDDLTYLR 507
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = +1
Query: 91 LKRI-YPQVPANGTTSITEYR 150
+K+I +PQVP N T +T R
Sbjct: 487 VKKIEWPQVPKNATDDLTYLR 507
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 377 DTYLIQN*MPTDIPYVNTNTHFTFTD 300
+ Y +P D P +NT T ++T+
Sbjct: 62 EVYYHHQTIPQDNPIINTETGLSYTN 87
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.8 bits (44), Expect = 5.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 377 DTYLIQN*MPTDIPYVNTNTHFTFTD 300
+ Y +P D P +NT T ++T+
Sbjct: 62 EVYYHHQTIPQDNPIINTETGLSYTN 87
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.0 bits (42), Expect = 9.9
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Frame = +3
Query: 105 PTGSCEWDNKHHRVSCNCLPGFTGHLCDSCESSNAVFPLCHDIPTEPPCKC-DVRGIVDP 281
P+G C ++NK +R + + C +C N C + P C D +
Sbjct: 669 PSGDCFYENKFYRQEAQWTS--SDNPCTTCFCENG-NNKCFTMEC-PQVTCPDNMKLEKV 724
Query: 282 TRECDEVCECKVSIGVHVRNISRHLI 359
EC +C S+ RN+ + I
Sbjct: 725 PGECCAICVNATSLVESNRNVPQKCI 750
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 165 GFTGHLCDSCESSNAVFP 218
G++G LCD + +FP
Sbjct: 128 GYSGSLCDQGFAQQPMFP 145
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,525
Number of Sequences: 336
Number of extensions: 3614
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -