Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0932
         (712 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1013 - 7931756-7935109                                           31   1.2  
04_04_0163 - 23217212-23217396,23217503-23217569,23217678-23217743     30   1.6  
04_04_0917 - 29404341-29404519,29404610-29404744,29404898-294052...    29   3.6  
03_03_0193 - 15312568-15312753,15312811-15312933,15313112-153131...    29   4.8  
08_02_0308 + 15617044-15617173,15618342-15618757                       28   6.4  
06_03_0899 - 25776159-25776797,25776898-25777806,25779425-257795...    28   6.4  
05_07_0164 - 28099839-28099861,28100148-28100265,28100546-281007...    28   8.4  
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804...    28   8.4  

>06_01_1013 - 7931756-7935109
          Length = 1117

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = +3

Query: 183 CDSCESSNAVFPLCHDIPTEPPCKCDVRGIVDPTRECDEVCECKVSIGVHVRNISRH 353
           C  CE        CH   T    K      +DP   CD+VC+ K+  GVH   ++ H
Sbjct: 401 CGECELMPGKVTACHCGKTRLLEKR--ASCLDPIPTCDKVCDKKLPCGVHRCKVTCH 455


>04_04_0163 - 23217212-23217396,23217503-23217569,23217678-23217743
          Length = 105

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 228 DIPTEPPCKCDVRGIVDPTRECDEVCECKVSIGVHVRNISR 350
           D P  PP       IVDP ++C   C+ + S   H +  SR
Sbjct: 25  DYPPAPPLGPPPHKIVDPGKDCVGACDARCSEHSHKKRCSR 65


>04_04_0917 -
           29404341-29404519,29404610-29404744,29404898-29405225,
           29405313-29405532,29405653-29406647,29407233-29407493,
           29407534-29407872,29409309-29409497
          Length = 881

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = +2

Query: 551 RSYYRLARTLKSDTVVTMPPLVGPSGRLAAFDDDEKAELLGRYIAN 688
           +S +RLAR L S  +  +P  V PSG    F   EKA LL   I +
Sbjct: 586 KSKFRLARLL-SFRLYNVPMDVSPSGICGPFKQPEKANLLEMLIVD 630


>03_03_0193 -
           15312568-15312753,15312811-15312933,15313112-15313134,
           15313196-15313349,15314443-15314754
          Length = 265

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 135 HHRVSCNCLPGFTGHLCDS-CESSNAVFPLCHDIPTEPPCKCDVRGIV 275
           HH  +C    GF  HL  S C S      L  D+ +E PC   +RG +
Sbjct: 143 HHLSTC----GFQSHLLGSWCHSPQMKKNLILDLNSENPCSFTIRGFL 186


>08_02_0308 + 15617044-15617173,15618342-15618757
          Length = 181

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +3

Query: 159 LPGFTGHLCDSCESSNAVFPLCHDIPTEPPCKCDVRGIVDPTRECDEVCECKVSIGV 329
           LP   GHLCD C+ +     + H +        ++R ++D +  C  + +C V  GV
Sbjct: 88  LPEIVGHLCDHCKVAEGT--MLHLLFPGKDLNSELRALLDDS-VCQYMNDCIVGGGV 141


>06_03_0899 -
           25776159-25776797,25776898-25777806,25779425-25779592,
           25779703-25779890,25779993-25780137,25780566-25780775
          Length = 752

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 621 GPTRGGIVTTVSDLRVRAKR**DLWIHASVS 529
           G T  G +     L + A+R  DLW+HA+VS
Sbjct: 713 GGTAAGELDMAEGLGITARRKSDLWLHATVS 743


>05_07_0164 -
           28099839-28099861,28100148-28100265,28100546-28100770,
           28100843-28101015,28101292-28101385,28102957-28103048,
           28103370-28103400
          Length = 251

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 317 EYWCSRKEYQSAFNFVL 367
           +YWC  K+Y+++ N VL
Sbjct: 94  DYWCLEKDYENSMNMVL 110


>01_01_1018 -
           8046819-8046876,8046995-8047212,8048099-8048177,
           8048455-8048540,8048698-8048983,8049063-8049205,
           8049308-8049508,8049626-8049754,8050463-8050738,
           8050823-8051098,8051364-8052364,8052452-8052634,
           8052865-8052937,8053205-8053313,8053622-8053785
          Length = 1093

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/56 (28%), Positives = 28/56 (50%)
 Frame = +1

Query: 472 DSLRTTVLFDTNSLTQLSWANTCMNPKVLLPLSSYSQIGYGSNYAPPRRPLRPTRG 639
           DS + +    ++SL+ +    TC +    LP+ S+S +  G N +   + L PT G
Sbjct: 183 DSSQPSTSGSSSSLSAVWDQTTCSSAMRTLPMDSFSTVN-GQNLSTNNKSLYPTTG 237


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,245,396
Number of Sequences: 37544
Number of extensions: 397269
Number of successful extensions: 1074
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)