Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0931
         (741 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0255 - 15422536-15422640,15422734-15422790,15422917-154230...    31   1.3  
05_01_0066 - 465526-466107,466541-466741                               28   9.0  

>11_04_0255 -
           15422536-15422640,15422734-15422790,15422917-15423013,
           15423155-15423222,15423299-15423344,15423467-15423621,
           15423767-15423995,15424124-15424200,15425804-15425856,
           15426082-15426139
          Length = 314

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 262 GITCAFPVECAHL*QSNEYCLFGVYLTGL 348
           G++C F   C HL   + +  FGVY+TG+
Sbjct: 57  GLSCLFWYSCIHLQTCSLWMSFGVYVTGI 85


>05_01_0066 - 465526-466107,466541-466741
          Length = 260

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 459 LWISLFSKPQPMPTAKYGKVL-DDILDSNCLFIYLLNLKSC 340
           L + + S     P   YG V+  DILD NC+ I+  N  +C
Sbjct: 21  LSVKILSSDVGYPINLYGTVIVRDILDFNCITIFPRNRDNC 61


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,634,923
Number of Sequences: 37544
Number of extensions: 254231
Number of successful extensions: 390
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 390
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)