Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0928
         (751 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0479 + 14529783-14530613                                         31   1.3  
04_03_0574 - 17338777-17339077,17339390-17340222,17340304-173407...    29   3.9  
01_06_1485 + 37703696-37703815,37703970-37704044,37704598-377046...    29   3.9  
08_02_0707 - 20212190-20214592                                         28   9.1  
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329...    28   9.1  

>05_03_0479 + 14529783-14530613
          Length = 276

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 365 SDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNE 246
           +D  +A SF  +L+E  D S P       +    PWW+ E
Sbjct: 221 ADEVTAPSFEHLLVELGDLSAPPPSTKAAEFDWLPWWEGE 260


>04_03_0574 -
           17338777-17339077,17339390-17340222,17340304-17340765,
           17340843-17341030,17341244-17341576,17341665-17341796,
           17342604-17342643
          Length = 762

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = -3

Query: 206 NYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHRFRSLY 27
           NY    + ENF +L K I +  K  K++ + +  K+ +    + +    W+  H+   + 
Sbjct: 114 NYCGLAARENFGILHKDIGKVTKAEKERAWTATEKWFT-FPAEAKDRLKWKAFHKMGYIG 172

Query: 26  KES 18
           KE+
Sbjct: 173 KEA 175


>01_06_1485 +
           37703696-37703815,37703970-37704044,37704598-37704699,
           37704792-37704845,37705030-37705122,37705215-37705307,
           37707150-37707254,37707356-37707454,37707558-37707899
          Length = 360

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
 Frame = -3

Query: 386 MKINQVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWW----DNECSEAIKSRK 219
           M +     DY    +  K LI     + P++R++  +I S PW+      E +E  ++  
Sbjct: 217 MSVQYKIPDYVHISAECKQLIARIFVNNPLRRITMKEIKSHPWFLKNLPRELTETAQAMY 276

Query: 218 EAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSW 108
               N +   S +  + + K + E R + K  +   W
Sbjct: 277 YRRDNSVPSFSDQTSEEIMKIVQEARTMPKSSRTGYW 313


>08_02_0707 - 20212190-20214592
          Length = 800

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = -3

Query: 692 PSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASS-NVLDLSICSANLASSLNWSTFSST 516
           PS++ Y + LL ++  H+L +L   +P  R+ ASS   L   +   + A SL    FS+ 
Sbjct: 41  PSSSPYAAALLRLLALHSLFLL---APAARAPASSFPSLPPLLALLSAAVSLLLPPFSAA 97

Query: 515 LGSDH-YPIIINL 480
             + H +P + +L
Sbjct: 98  AAAHHPFPAVTHL 110


>02_01_0459 +
           3298780-3298788,3298900-3299037,3299174-3299207,
           3299528-3299531,3299814-3299949,3300034-3300090,
           3301689-3301786,3301876-3301947,3302056-3302228,
           3302552-3302698,3303113-3303336,3305300-3305306,
           3305634-3305800,3306033-3306068,3306787-3307004,
           3307115-3307172,3307761-3307842,3308045-3308207,
           3308594-3308598,3308700-3308885,3308969-3309548,
           3309642-3309774,3309880-3309948,3310184-3310395,
           3310654-3310891,3311228-3311386,3311501-3311926,
           3312010-3312447,3312593-3312712,3312784-3313266,
           3313471-3314009,3314178-3314667,3314836-3314904,
           3315735-3315839,3315940-3316158,3316254-3316508,
           3316602-3316651,3317175-3317284,3317372-3317454,
           3317560-3317772,3317870-3318040
          Length = 2391

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
 Frame = -3

Query: 269 SPPWWDNECSEAIKSRKEAEMNYLA----YTSS-ENFDLLSKSITETRKLFKKKK 120
           S P+  +E ++A+K R+E + + +     Y S   +FD  SK    T+ L+ KKK
Sbjct: 229 SIPYSTSEEAKAVKKRRERDSDTMTRSDKYRSDVTDFDKTSKGTEATKSLYLKKK 283


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,103,455
Number of Sequences: 37544
Number of extensions: 314239
Number of successful extensions: 928
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)