Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0928
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27764| Best HMM Match : RVT_1 (HMM E-Value=3.99931e-42) 47 2e-05
SB_16491| Best HMM Match : MutS_V (HMM E-Value=8.2e-11) 45 6e-05
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12) 42 4e-04
SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25) 42 5e-04
SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11) 41 0.001
SB_20258| Best HMM Match : Exo_endo_phos (HMM E-Value=7.1e-16) 41 0.001
SB_42532| Best HMM Match : Exo_endo_phos (HMM E-Value=7.2e-16) 40 0.002
SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_22556| Best HMM Match : FHIPEP (HMM E-Value=6) 39 0.004
SB_8436| Best HMM Match : Cor1 (HMM E-Value=3.2) 39 0.004
SB_20973| Best HMM Match : TFIIF_beta (HMM E-Value=3.3) 38 0.007
SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_18035| Best HMM Match : Triadin (HMM E-Value=4.2) 38 0.009
SB_50618| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00017) 37 0.015
SB_48818| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00029) 37 0.015
SB_28024| Best HMM Match : RVT_1 (HMM E-Value=0) 37 0.015
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32) 37 0.020
SB_30110| Best HMM Match : TFIIF_beta (HMM E-Value=2.5) 36 0.027
SB_34129| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=4.7) 36 0.035
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 36 0.035
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_31418| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_29863| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_31876| Best HMM Match : RVT_1 (HMM E-Value=0) 36 0.046
SB_26672| Best HMM Match : Exo_endo_phos (HMM E-Value=0.46) 35 0.061
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.061
SB_39504| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00014) 35 0.081
SB_32348| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_3788| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00073) 35 0.081
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_1792| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-11) 35 0.081
SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40) 35 0.081
SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_32926| Best HMM Match : DUF310 (HMM E-Value=7.4) 35 0.081
SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.081
SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.43
SB_31295| Best HMM Match : Exo_endo_phos (HMM E-Value=7.1e-11) 32 0.43
SB_45939| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00051) 31 0.76
SB_44234| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_54022| Best HMM Match : UPF0058 (HMM E-Value=2.4) 31 0.76
SB_42168| Best HMM Match : NolV (HMM E-Value=7.1) 31 0.76
SB_9018| Best HMM Match : NolV (HMM E-Value=2.7) 31 0.76
SB_16239| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_5006| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24508| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_20189| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061) 31 1.3
SB_8662| Best HMM Match : MTH865 (HMM E-Value=7.9) 31 1.3
SB_41296| Best HMM Match : RVT_1 (HMM E-Value=2.8e-24) 30 1.7
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_47788| Best HMM Match : Cir_Bir_Yir (HMM E-Value=8.6) 30 1.7
SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_53870| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20) 30 2.3
SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14) 30 2.3
SB_37969| Best HMM Match : COLFI (HMM E-Value=0.03) 30 2.3
SB_3206| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00047) 29 3.0
SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44) 29 3.0
SB_51124| Best HMM Match : DUF1106 (HMM E-Value=7) 29 4.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 29 4.0
SB_34610| Best HMM Match : DUF1400 (HMM E-Value=0.73) 29 4.0
SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 29 4.0
SB_52105| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0012) 29 4.0
SB_47695| Best HMM Match : DUF1106 (HMM E-Value=8.5) 29 4.0
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_32642| Best HMM Match : IL10 (HMM E-Value=2.5) 29 4.0
SB_23193| Best HMM Match : Lipoprotein_17 (HMM E-Value=2.3) 29 4.0
SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 29 4.0
SB_35327| Best HMM Match : Cellulase (HMM E-Value=4e-05) 29 5.3
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 29 5.3
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29) 29 5.3
SB_52393| Best HMM Match : LEA_4 (HMM E-Value=8) 29 5.3
SB_41523| Best HMM Match : bZIP_1 (HMM E-Value=8.8) 29 5.3
SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30) 28 7.0
SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9) 28 7.0
SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 28 7.0
SB_25123| Best HMM Match : LEA_4 (HMM E-Value=8) 28 7.0
SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_11056| Best HMM Match : FaeA (HMM E-Value=5.6) 28 7.0
SB_59558| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_47354| Best HMM Match : RVT_1 (HMM E-Value=2e-07) 28 9.3
SB_44003| Best HMM Match : DUF658 (HMM E-Value=1.1) 28 9.3
SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076) 28 9.3
>SB_27764| Best HMM Match : RVT_1 (HMM E-Value=3.99931e-42)
Length = 715
Score = 46.8 bits (106), Expect = 2e-05
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 9/236 (3%)
Frame = -3
Query: 737 LLMGDFNCSHMSW---GSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSI 567
+++GDFN S + W + + + + L +II + L L TR R N+LDL +
Sbjct: 131 IVIGDFNLSEIDWTTGAAKTGDCLTNYLCKIIKDNYLWQLIDF--PTRGR---NILDLIL 185
Query: 566 CSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV- 390
S + + F + +DH I L NI+ T+ R+ Y+ + DW +++
Sbjct: 186 TSIP-SKFHHIHGFDDIISTDHKLISFELDL-NISKKTKTKRVVYNFKRADWTGLNESLK 243
Query: 389 ----DMKINQVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSR 222
D+ +Q + S ++T + + A E P + + PW D+E +K +
Sbjct: 244 NIPWDLCFSQSDNIDSSLANWTDLFLAAVIEHIP--KSKPRNVSDYPWIDHELRSLLK-K 300
Query: 221 KEAEMNYLAYTSSENFDLLSKSITETRK-LFKKKKFDSWRKFCSEISPDIQPSAVW 57
K+A+ T S + + K + KKK + K S IS + P W
Sbjct: 301 KDAQRKKANKTGSLAAERKYNELRRAAKQMLSKKKKEHDEKLKSVISDN--PKRFW 354
>SB_16491| Best HMM Match : MutS_V (HMM E-Value=8.2e-11)
Length = 877
Score = 45.2 bits (102), Expect = 6e-05
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 10/216 (4%)
Frame = -3
Query: 737 LLMGDFNCSHMSW---GSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSI 567
+++GDFN S + W + + + + L +II + L L TR R N+LDL +
Sbjct: 672 IVIGDFNLSEIDWTTGAAKTGDCLTNYLCKIIKDNYLWQLIDF--PTRGR---NILDLIL 726
Query: 566 CSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV- 390
S + + F + +DH I L NI+ T+ R+ Y+ + DW +++
Sbjct: 727 TSIP-SKFHHIHGFDDIISTDHKLISFELDL-NISKKTKTKRVVYNYKRADWTGLNESLK 784
Query: 389 ----DMKINQVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSR 222
D+ +Q + S ++T + + A +E P + + PW D+E +K +
Sbjct: 785 NIPWDLCFSQSDNIGSSLANWTDLFLAAVNEHIP--KSKPRNVSDYPWIDHELRSLLK-K 841
Query: 221 KEAEMNYLAYTSSENFDLLSKSITETRK--LFKKKK 120
K+A+ T S + + K L KKKK
Sbjct: 842 KDAQRKKANKTRSLAAERKYNELRRAAKQMLSKKKK 877
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 42.7 bits (96), Expect = 3e-04
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 16/156 (10%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRM-KY-SIRNNDWDVFK---QNVDMKINQVQSDYCSAD 345
SDHY + + + T KPRM +Y S +N D D F +NV I D A
Sbjct: 125 SDHYLVFCVIK-AGVFTKA-KPRMLEYRSYKNLDADSFNDDLRNVPWHIVNSMDDIDDAL 182
Query: 344 -SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEA--------EMNYLAY 192
++ ++ +E AD+ P+KR + K PW +N+ SE++K R A ++N L
Sbjct: 183 LTWNQLFLEVADDHAPIKR-QRVKGTPIPWMNNQISESMKERDIAHRIANLRNKVNKLVK 241
Query: 191 TSSENF--DLLSKSITETRKLFKKKKFDSWRKFCSE 90
+S + D++ KS ++ K++K RK SE
Sbjct: 242 SSKSKYYCDMIEKSKGDSGKIWKAVNEACNRKSTSE 277
>SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12)
Length = 633
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/96 (26%), Positives = 41/96 (42%)
Frame = -3
Query: 365 SDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTS 186
S++ + S K LIE D+ P+K K PS W+ EA + R++ E +
Sbjct: 376 SEHLAVHSTKKTLIETFDQHAPLKHSKKTLRPSAQWYHEGIGEAKRKRRKLERRWRKSKL 435
Query: 185 SENFDLLSKSITETRKLFKKKKFDSWRKFCSEISPD 78
+ +L K E + K+ K + S+ S D
Sbjct: 436 CVDRELFVKQCNEVNLMLKEAKTSYYSSIISDSSSD 471
>SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25)
Length = 1486
Score = 41.9 bits (94), Expect = 5e-04
Identities = 60/228 (26%), Positives = 90/228 (39%), Gaps = 7/228 (3%)
Frame = -3
Query: 746 QPFLLMGDFNCSHMSWGSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSI 567
+P LL GDFN H++ S ++ + L+++ L + PT S N LDL I
Sbjct: 183 EPLLLTGDFNI-HVNIDSDND---AARFLDLLSSMGL-QQHINFPT---HISGNTLDLLI 234
Query: 566 CSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQK-PRMKYSIRN-NDWDVFKQN 393
S L SSL + SDH + F IN + + R K S R D
Sbjct: 235 -SRTLDSSLIHDVRPGSYFSDHC-----IAFFAINVSMPEFSRKKVSFRKVKAIDTTAFM 288
Query: 392 VDMKINQVQSDYCS-----ADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIK 228
D+ + + D S D + K L D P+K + P PW+ E EA +
Sbjct: 289 SDLSASDLCQDPPSETVQLVDCYNKTLAGLLDRHAPLKTKTVTVRPQVPWYSEEIREAKR 348
Query: 227 SRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEIS 84
R+ AE + S+++ + L K+ K F S+ S
Sbjct: 349 VRRRAERKWRITRSADDLASFKRHKNHVTYLLKEAKSAFLTDFVSQNS 396
>SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2362
Score = 41.1 bits (92), Expect = 0.001
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 6/161 (3%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRM-KY-SIRNNDWDVFK---QNVDMKINQVQSDYCSAD 345
SDHY + + + T KPRM +Y S +N D D F +NV I D A
Sbjct: 1851 SDHYLVFCVIK-AGVFTKA-KPRMLEYRSYKNFDADSFNDDLRNVPWHIVNSMDDIDDAL 1908
Query: 344 -SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDL 168
++ ++ +E AD+ P+KR + K PW +N+ SE++K R A + ++
Sbjct: 1909 LTWNQLFLEVADDHAPIKR-QRVKGTPIPWMNNQISESMKERDIAHRIARKLNTERHWKT 1967
Query: 167 LSKSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIH 45
+ KL K K + E D +W+ ++
Sbjct: 1968 YRNLRNKVNKLVKSSKSKYYCDMIEESKGD--SGKIWKAVN 2006
>SB_31839| Best HMM Match : Exo_endo_phos (HMM E-Value=1.3e-11)
Length = 887
Score = 41.1 bits (92), Expect = 0.001
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH +I + + IN N K S +N D D +K+ ++M V + +
Sbjct: 447 SDH-ALIYGILKERINQNKPKVISFRSYKNFDADSYKKMLEMAPWHVGELFDETEDQVNY 505
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI++++EA YL + EN++L
Sbjct: 506 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKREANAKYLKDKTPENWELRR 564
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 565 RARNEATQQRRKAIKEYWR 583
>SB_20258| Best HMM Match : Exo_endo_phos (HMM E-Value=7.1e-16)
Length = 525
Score = 40.7 bits (91), Expect = 0.001
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 7/162 (4%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRM-KY-SIRNNDWDVFK---QNVDMKINQVQSDYCSAD 345
SDHY + + + T KPRM +Y S +N D D F +NV I D A
Sbjct: 251 SDHYLVFCVIK-AGVFTKA-KPRMLEYRSYKNFDADSFNDDLRNVPWHIVNSMDDIDDAL 308
Query: 344 -SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDL 168
++ ++ +E AD+ P+KR + K PW +N+ SE++K R A + ++
Sbjct: 309 LTWNQLFLEVADDHAPIKR-QRVKGTPIPWMNNQISESMKERDIAHRIARKLNTERHWKT 367
Query: 167 LSKSITETRKLFKKKKFDSWRKFCSEISPDIQPSA-VWQKIH 45
+ KL K K + +C I S +W+ ++
Sbjct: 368 YRNLRNKVNKLVKSSKS---KYYCDMIEKSKGDSGKIWKAVN 406
>SB_42532| Best HMM Match : Exo_endo_phos (HMM E-Value=7.2e-16)
Length = 399
Score = 40.3 bits (90), Expect = 0.002
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRM-KY-SIRNNDWDVFK---QNVDMKINQVQSDYCSAD 345
SDHY + + + T KPRM +Y S +N D D F +NV I D A
Sbjct: 251 SDHYLVFCVIK-AGVFTKA-KPRMLEYRSYKNFDADSFNDDLRNVPWHIVNSMDDIDDAL 308
Query: 344 -SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDL 168
++ ++ +E AD+ P+KR + K PW +N+ SE++K R A + ++
Sbjct: 309 LTWNQLFLEVADDHAPIKR-QRVKGTPIPWMNNQISESMKERDIAHRIARKLNTERHWKT 367
Query: 167 LSKSITETRKLFKKKK 120
+ KL K K
Sbjct: 368 YRNLRNKVNKLVKSSK 383
>SB_29231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2271
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH +I + + IN N K S +N D D +K+ ++M V + +
Sbjct: 1708 SDH-ALIYGVLKERINQNKPKVISFRSYKNFDADSYKKMLEMAPWHVGELFDETEDQVNY 1766
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI+++++A YL + EN++L
Sbjct: 1767 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRR 1825
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 1826 RARNEATQQRRKAIKEYWR 1844
>SB_22556| Best HMM Match : FHIPEP (HMM E-Value=6)
Length = 363
Score = 39.1 bits (87), Expect = 0.004
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 7/228 (3%)
Frame = -3
Query: 746 QPFLLMGDFNCSHMSWGSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSI 567
+P +L GDFN H++ S ++ + L+++ L + PT S N LDL I
Sbjct: 18 EPLVLTGDFNI-HVNIDSDND---AARFLDLLSSMGL-QQHINFPT---HISGNTLDLLI 69
Query: 566 CSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQK-PRMKYSIRN-NDWDVFKQN 393
S L SSL + SDH + F IN + + R K S R D
Sbjct: 70 -SRTLDSSLIHDVRPGSYFSDHC-----IAFFAINVSMPEFSRKKVSFRKVKAIDTTAFM 123
Query: 392 VDMKINQVQSDYCS-----ADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIK 228
D+ +++ D S D + K L P+K + P PW+ E EA +
Sbjct: 124 SDLSASELCQDPPSETVQLVDCYNKTLAGLLGRHAPLKTKTVTVRPQVPWYSEEIREAKR 183
Query: 227 SRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEIS 84
R+ AE + S+++ + L K+ K F S+ S
Sbjct: 184 VRRRAERKWRTTRSADDLASFKRHKNHVTYLLKEAKSAFLTDFVSQNS 231
>SB_8436| Best HMM Match : Cor1 (HMM E-Value=3.2)
Length = 334
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH +I + + IN N K S +N D D +K+ ++M V + +
Sbjct: 106 SDH-ALIYGVLKERINQNKPKVISFRSYKNFDADSYKKMLEMAPWHVGELFDETEDQVNY 164
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI+++++A YL + EN++L
Sbjct: 165 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRR 223
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 224 RARNEATQQRRKAIKEYWR 242
>SB_20973| Best HMM Match : TFIIF_beta (HMM E-Value=3.3)
Length = 239
Score = 38.3 bits (85), Expect = 0.007
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH +I + + IN N K S +N D D +K+ ++M V + +
Sbjct: 65 SDH-ALIYGVLKERINQNKPKVISFRSYKNFDADSYKKMLEMAPWLVGELFDETEDQVNY 123
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI+++++A YL + EN++L
Sbjct: 124 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRR 182
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 183 RARNEATQQRRKAIKEYWR 201
>SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1007
Score = 37.9 bits (84), Expect = 0.009
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
Frame = -3
Query: 470 NINTNTQKPRMKYSIRNNDWDVFKQNVDMKIN----QVQSDYCSADS---FTKILIEAAD 312
+I N +KPR Y +R D+D + + + N + S Y + F + L+E A+
Sbjct: 858 SIKVNKKKPRYVYKLRLTDFDAVRTDAEELSNNFFAREPSQYSVEQNWQMFIEGLLEIAN 917
Query: 311 ESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNY 201
+ P+K++ G PW E ++ RK NY
Sbjct: 918 KRVPMKKL--GSSSDAPWITREHKRLLRKRKRLYNNY 952
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 37.9 bits (84), Expect = 0.009
Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 7/177 (3%)
Frame = -3
Query: 593 SSNVLDLSICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQK-PRMKYSIRN- 420
S N LDL I S L SSL + SDH + F IN + + R K S R
Sbjct: 4575 SGNTLDLLI-SRTLDSSLIHDVRPGSYFSDHC-----IAFFAINVSMPEFSRKKVSFRKV 4628
Query: 419 NDWDVFKQNVDMKINQVQSDYCS-----ADSFTKILIEAADESFPVKRVSKGKIPSPPWW 255
D D+ +++ D S D + K L D P+K + P PW+
Sbjct: 4629 KAIDTTAFMSDLSASELCQDPPSETVQLVDCYNKTLAGLLDRHAPLKTKTVTVRPQVPWY 4688
Query: 254 DNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEIS 84
E EA + R+ AE + S+++ + L K+ K F S+ S
Sbjct: 4689 SEEIREAKRVRRRAERKWRTTRSADDLASFKRHKNHVTYLLKEAKSAFLTDFVSQNS 4745
>SB_18035| Best HMM Match : Triadin (HMM E-Value=4.2)
Length = 331
Score = 37.9 bits (84), Expect = 0.009
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH +I + + IN N K S +N D D +K+ ++M V +
Sbjct: 65 SDH-ALIYGVLKERINQNKPKVISFRSYKNFDADSYKKMLEMAPWHVGELFDETKDQVNY 123
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI+++++A YL + EN++L
Sbjct: 124 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRR 182
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 183 RARNEATQQRRKAIKEYWR 201
>SB_50618| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00017)
Length = 748
Score = 37.1 bits (82), Expect = 0.015
Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 10/196 (5%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSEL--LEIIDYHNLCVLNSGSPTTRSRASSNVLDLSIC 564
L+ GDFN S +SW S + EL EI++ H L +N PT +LDL I
Sbjct: 311 LISGDFNMSKISWASEEQSLGARELSFTEILNDHYLSQMNH-FPT----RGDKILDLVIT 365
Query: 563 SANLASSLNWSTFSSTLG--SDHYPIIINLPFKNINTNTQK-PRMKYSIRNNDWDVFKQN 393
+A+ +N + G SDH ++ F K R Y+ D+D + +
Sbjct: 366 NASDQVCVNEVLSPNEAGVFSDHG--VVCFEFSAFEKAPSKFHRSVYNYTKADFDGLRAS 423
Query: 392 VD-MKINQVQSDYCSAD----SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIK 228
+ +++ ++ D ++ + + A + P K++ +G+ P PW + + IK
Sbjct: 424 LSALELTMSSNENSDIDTDWQNWKDLFLAAVADHVPSKKL-RGRNP-VPWMNGTILDLIK 481
Query: 227 SRKEAEMNYLAYTSSE 180
+KE L T ++
Sbjct: 482 -KKETTRRRLKKTPAK 496
>SB_48818| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00029)
Length = 318
Score = 37.1 bits (82), Expect = 0.015
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRM-KYS-IRNNDWDVFK---QNVDMKINQVQSDYCSAD 345
SDHY + + + T KPRM +Y +N D D F +NV I D A
Sbjct: 191 SDHYLVFCVIK-AGVFTKA-KPRMLEYRPYKNFDADSFNDDLRNVPWHIVNSMDDIDDAL 248
Query: 344 -SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSR 222
++ ++ +E AD+ P+KR + K PW +N+ SE++K R
Sbjct: 249 LTWNQLFLEVADDHAPIKR-QRVKGTPIPWMNNQISESMKER 289
>SB_28024| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 968
Score = 37.1 bits (82), Expect = 0.015
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSEL--LEIIDYHNLCVLNSGSPTTRSRASSNVLDLSIC 564
L+ GDFN S SW S + EL EI++ H L +N PT +LDL I
Sbjct: 247 LISGDFNMSKFSWASEEQSLGARELSFTEILNDHYLSQMNH-FPT----RGDKILDLVIT 301
Query: 563 SANLASSLNWSTFSSTLG--SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV 390
+A+ +N + G SDH + + ++ R Y+ D+D + ++
Sbjct: 302 NASDQVCVNEVLSPNEAGVFSDHGVVCFEFS-AFVKAPSKFHRSVYNYTKADFDGLRASL 360
Query: 389 D-MKINQVQSDYCSAD----SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKS 225
+++ ++ D ++ + + A + P K++ +G+ P PW + + IK
Sbjct: 361 SALELTMSSNENSDIDTDWQNWKDLFLAAVADHVPSKKL-RGRNP-VPWMNGTILDLIK- 417
Query: 224 RKEAEMNYLAYTSSE 180
+KE L T ++
Sbjct: 418 KKETTRRRLKKTPAK 432
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 36.7 bits (81), Expect = 0.020
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 10/183 (5%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGS----PSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLS 570
++ GDFNC ++W S P+ S + ++ N + RAS LDL
Sbjct: 341 VISGDFNCGDINWLSDPPLPTAASTASLMRRLLTLVNDFAFSQHVTVPTRRASLKTLDLV 400
Query: 569 ICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV 390
+ S S +S SDH + ++ + + P Y +WD F+Q+V
Sbjct: 401 LSSTPAMVS---DVDTSPGMSDHDIVTFSITLCP-RRSVRPPHRVYLFDKANWDGFRQHV 456
Query: 389 DMKINQVQSDYCSADSFT------KILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIK 228
I+ V C++ S K I++ + F +++K K P PW + ++
Sbjct: 457 -TSISNVFMKSCNSRSVEENWSCFKNSIQSGIDLFVPSKMTKKK-PDLPWMTSSIKRQMR 514
Query: 227 SRK 219
R+
Sbjct: 515 KRE 517
>SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32)
Length = 1241
Score = 36.7 bits (81), Expect = 0.020
Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 11/184 (5%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLS 570
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 148 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL- 205
Query: 569 ICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV 390
+ S N SDH ++ + K R Y + D D KQ +
Sbjct: 206 VLSNNKDIIRGVKVIDGI--SDHDIVLFTVKLACQRKRNVK-RKVYIKKKADSDRIKQEL 262
Query: 389 D------MKIN-QVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAI 231
+++N + S Y D F + + D P K S + PW++ +
Sbjct: 263 HNLLPTILELNSNINSVYKMWDEFERNIHRIMDTCIPHKTTSSRY--NLPWFNRALRRQV 320
Query: 230 KSRK 219
++++
Sbjct: 321 RAKQ 324
>SB_30110| Best HMM Match : TFIIF_beta (HMM E-Value=2.5)
Length = 368
Score = 36.3 bits (80), Expect = 0.027
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH +I + + IN N K S +N D D +K+ ++M V + +
Sbjct: 113 SDH-ALIYGVLKERINQNKPKVISFRSYKNFDADSYKKMLEMAPWHVGELFDETEDQVNY 171
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI+++++A YL + EN++
Sbjct: 172 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWEHRR 230
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 231 RARNEATQQRRKAIKEYWR 249
>SB_34129| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=4.7)
Length = 254
Score = 35.9 bits (79), Expect = 0.035
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Frame = -3
Query: 431 SIRNNDWDVFK---QNVDMKINQVQSDYCSAD-SFTKILIEAADESFPVKRVSKGKIPSP 264
S +N D D F +NV I D A ++ ++ +E AD+ P+KR + K
Sbjct: 6 SYKNFDADSFNDDLRNVPWHIVNSMDDIDDALLTWNQLFLEVADDHAPIKR-QRVKGTPI 64
Query: 263 PWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEIS 84
PW +N+ SE++K R A + ++ + KL K K + +C I
Sbjct: 65 PWMNNQISESMKERDIAHRIARKLNTERHWKTYRNLRNKVNKLVKSSKS---KYYCDMIE 121
Query: 83 PDIQPSA-VWQKIH 45
S +W+ ++
Sbjct: 122 KSKGDSGKIWKAVN 135
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 35.9 bits (79), Expect = 0.035
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 10/183 (5%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGS----PSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLS 570
++ GDFNC ++W S P+ S + ++ N + RAS LDL
Sbjct: 89 VISGDFNCGDINWLSDPPLPTAASTASLMRRLLTLVNDFAFSQHVTVPTRRASLKTLDLV 148
Query: 569 ICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV 390
+ S S +S SDH + ++ + + P Y +WD F+Q+V
Sbjct: 149 LSSTPAMVS---DVDTSPGMSDHDIVTFSITLCP-RRSVRPPHRVYLFDKANWDGFRQHV 204
Query: 389 DMKINQVQSDYCSADSFT------KILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIK 228
I+ V C++ S K I + + F +++K K P PW + ++
Sbjct: 205 -TSISNVFMKSCNSRSVEENWSCFKNSIHSGIDLFVPSKMTKKK-PDLPWMTSSIKRQMR 262
Query: 227 SRK 219
R+
Sbjct: 263 KRE 265
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 35.9 bits (79), Expect = 0.035
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 4/139 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH +I + + IN N K S +N D D +K+ ++ V + +
Sbjct: 426 SDH-ALIYGVLKERINQNKPKVISFRSYKNFDADSYKKLLETAPWHVGELFDETEDQVNY 484
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI++++ A YL + EN++L
Sbjct: 485 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRNANAKYLKDKTPENWELRR 543
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 544 RARNEATQQRRKAIKEYWR 562
>SB_31418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 35.9 bits (79), Expect = 0.035
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
Frame = -3
Query: 470 NINTNTQKPRMKY--SIRNNDWDVFKQNVD---MKINQVQSD-YCSADSFTKILIEAADE 309
NI PR KY RN D F +++ + I SD + +L E D
Sbjct: 113 NIRVTRFTPRYKYIRDERNFDEHAFTNDIEQLPLSIVYSTSDPEMQLEMLNTLLRECIDR 172
Query: 308 SFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFK 129
P+KR + P+P W E I++ ++ N + D + S E R K
Sbjct: 173 HAPLKRTKVTRPPAP--WLKELD--IQNLQQDCRNMRTEARKDKSDSIWNSFREKRNQLK 228
Query: 128 KKKFDSWRKFCSEISPDIQPSAVWQKIHR 42
+ R F + ++ VW+ IHR
Sbjct: 229 AMIGKAKRNFYYKALSSVKAKEVWRVIHR 257
>SB_29863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 590
Score = 35.9 bits (79), Expect = 0.035
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 6/149 (4%)
Frame = -3
Query: 470 NINTNTQKPRMKY--SIRNNDWDVFKQNVD---MKINQVQSD-YCSADSFTKILIEAADE 309
NI PR KY RN D F +++ + I SD + +L E D
Sbjct: 392 NIRVTRFTPRYKYIRDERNFDEHAFTNDIEQLPLSIVYSTSDPEMQLEMLNTLLRECIDR 451
Query: 308 SFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFK 129
P+KR + P+P W E I++ ++ N + D + S E R K
Sbjct: 452 HAPLKRTKVTRPPAP--WLKELD--IQNLQQDCRNMRTEARKDKSDSIWNSFREKRNQLK 507
Query: 128 KKKFDSWRKFCSEISPDIQPSAVWQKIHR 42
+ R F + ++ VW+ IHR
Sbjct: 508 AMIGKAKRNFYYKALSSVKAKEVWRVIHR 536
>SB_20293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1821
Score = 35.9 bits (79), Expect = 0.035
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 9/195 (4%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSE--LLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSIC 564
L+ GDFN S +SW S + E EI++ H L +N PT +LDL I
Sbjct: 58 LISGDFNMSKISWASEEQSLGARERSFTEILNDHYLSQMNH-FPT----RGDKILDLVIT 112
Query: 563 SANLASSLNWSTFSSTLG--SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV 390
+A+ +N + G SDH + + ++ R Y+ D+D + ++
Sbjct: 113 NASDQVCVNEVLSPNEAGVFSDHGVVCFEFS-AFVKAPSKFHRSVYNYTKADFDGLRASL 171
Query: 389 D-MKINQVQSDYCSAD----SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKS 225
+++ ++ D ++ + + A + P K++ +G+ P PW + + IK
Sbjct: 172 SALELTMSSNENSDIDTDWQNWKDLFLAAVADHVPSKKL-RGRNP-VPWMNGTILDLIK- 228
Query: 224 RKEAEMNYLAYTSSE 180
+KE L T ++
Sbjct: 229 KKETTRRRLKKTPAK 243
>SB_31876| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 630
Score = 35.5 bits (78), Expect = 0.046
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Frame = -3
Query: 431 SIRNNDWDVFK---QNVDMKINQVQSDYCSAD-SFTKILIEAADESFPVKRVSKGKIPSP 264
S +N D D F +NV I D A ++ + +E AD+ P+KR + K
Sbjct: 6 SYKNFDADSFNDDLRNVPWHIVNSMDDIDDALLTWNQFFLEVADDHAPIKR-QRVKGTPI 64
Query: 263 PWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEIS 84
PW +N+ SE++K R A + ++ + KL K K + E
Sbjct: 65 PWMNNQISESMKERDIAHRIARKLNTERHWKTYRNLRNKVNKLVKSSKSKYYCDMIEESK 124
Query: 83 PDIQPSAVWQKIH 45
D +W+ ++
Sbjct: 125 GD--SGKIWKAVN 135
>SB_26672| Best HMM Match : Exo_endo_phos (HMM E-Value=0.46)
Length = 1232
Score = 35.1 bits (77), Expect = 0.061
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 15/220 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSW---GSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSI 567
+++GDFN S + W + + + + L +II + L L +R R N+ DL +
Sbjct: 444 IVIGDFNLSEIDWTTGAAKTGDCLTNYLCKIIKDNYLWQLIDF--PSRGR---NIPDLIL 498
Query: 566 CSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV- 390
S + + F + +DH I L NI+ T+ R+ Y+ + DW +++
Sbjct: 499 TSIP-SKFQHIHGFDDIISTDHKLISFELDL-NISKKTKTKRVVYNFKRADWTGLNESLK 556
Query: 389 ----DMKINQVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNE---CSE-- 237
D+ +Q + S ++T + + A +E P + + PW D CS+
Sbjct: 557 NIPWDLCFSQSDNIDSSLANWTDLFLAAVNEHIP--KSKPRNVNDYPWIDPNGVLCSKRR 614
Query: 236 --AIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKK 123
++K + + + +L ++ +FD L K ++K
Sbjct: 615 MRSVKKQTKPD-RWLLKENTMSFDALRNKCFPKEKRARRK 653
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 35.1 bits (77), Expect = 0.061
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 11/183 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSW----GSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLS 570
++ GDFNC ++W +++ S + +++D L AS LDL
Sbjct: 476 VVSGDFNCGDINWKCDLPEVTSHATASLMHKLLDMIRDHALTQYVTVPTRPASLKTLDLV 535
Query: 569 ICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNV 390
+ S + S ++ + + SDH ++ ++ K +T+ P Y D + ++++
Sbjct: 536 LSS--VPSLVSHVQVKAGM-SDHDIVLFDINVKP-RKSTRPPHKVYLYHKADMEALREDI 591
Query: 389 DMKINQVQSDYCSAD-------SFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAI 231
+ + D C+ + SF ILI+A D P K +++ + PS PW +
Sbjct: 592 LSRATEF-LDQCTHNNLEENWSSFKNILIDAIDRHVPWK-MTRAR-PSLPWISRSIKRQM 648
Query: 230 KSR 222
+ R
Sbjct: 649 RKR 651
>SB_39504| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00014)
Length = 217
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 131 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 188
>SB_32348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 11 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 68
>SB_3788| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00073)
Length = 298
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 147 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 204
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 34.7 bits (76), Expect = 0.081
Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 4/144 (2%)
Frame = -3
Query: 509 SDHYPIIINL----PFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS 342
SDH ++ +L P + T + + I+ + D+ ++ K + S
Sbjct: 845 SDHASVLCSLQCLKPCLAVRTVSYRKLKSVDIQTLNSDLINSDLCTKTPNDLDELVSC-- 902
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ L A D+ P+K+ + P PW+ E A + R++AE + NFD
Sbjct: 903 YHNTLQAAVDKHAPLKQRTIVTRPRVPWFTEEIRLAKRERRKAEKIWRRSRMVANFDTFK 962
Query: 161 KSITETRKLFKKKKFDSWRKFCSE 90
+ L K+ + D + F ++
Sbjct: 963 QRRNALNNLLKRARRDYYADFIAD 986
>SB_1792| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-11)
Length = 476
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 348 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 405
>SB_1356| Best HMM Match : GCV_T (HMM E-Value=5.1e-40)
Length = 1006
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 835 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 892
>SB_38808| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 348 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 405
>SB_32926| Best HMM Match : DUF310 (HMM E-Value=7.4)
Length = 316
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 11 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 68
>SB_29272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDFN + W +P N LL+I D H+L PT R+ + N+LDL
Sbjct: 11 ILAGDFNAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNILDL 68
>SB_58595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1462
Score = 33.9 bits (74), Expect = 0.14
Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 12/188 (6%)
Frame = -3
Query: 740 FLLMGDFNCSHMSW--GSP-SNNYYGSELLEIIDYHNLCVLNSGSPTTRSRA--SSNVLD 576
+L++GDFN + W GS SN S E + + L +N+ SPT S + ++LD
Sbjct: 206 YLILGDFNLPKVEWLDGSGYSNTQQESAFTESLKDNALFQINT-SPTHFSPLDNTGHILD 264
Query: 575 LSICSANLASSLNWSTFSSTLG--SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVF 402
L I + S + ++G +DH + L + N + Y+ RN D+
Sbjct: 265 LVITNEPELISEIEALCPDSMGFPTDHSIVQFCLSTQLRRFNAPHHTI-YNFRNIDFTAL 323
Query: 401 KQNVDMKINQVQ----SDYCSA-DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSE 237
+ + V+ +D A D + ++L E D+ P ++ + PW+D E
Sbjct: 324 RDEIRESALLVECARNNDIDIAWDGWCRVLFEILDKHVP--KIRSRPNSTLPWFDAEVIN 381
Query: 236 AIKSRKEA 213
+K ++ A
Sbjct: 382 LLKKKETA 389
>SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 33.5 bits (73), Expect = 0.19
Identities = 33/143 (23%), Positives = 52/143 (36%)
Frame = -3
Query: 470 NINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADSFTKILIEAADESFPVKR 291
NI PR KY ++D D I Q+ + +L E D P+K
Sbjct: 524 NIRVTRFTPRYKYIRDERNFDEHAFTND--IEQLPFTIPRLEMLNTLLRECIDRHAPLKP 581
Query: 290 VSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDS 111
+ P+P W E I++ ++ N + D + S E R K +
Sbjct: 582 TKMTRPPAP--WLKELD--IQNLQQDCRNMRTEARKDKSDSIWNSFREKRNQLKAMIGKA 637
Query: 110 WRKFCSEISPDIQPSAVWQKIHR 42
R F + ++ VW+ IHR
Sbjct: 638 KRNFYYKTLSSVKAKEVWRVIHR 660
>SB_49600| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1273
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN-------NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVL 579
+L GDFN + W +P N LL+I D H+L PT R+ + N+L
Sbjct: 299 ILAGDFNAPDIDWVNPENPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNIL 357
Query: 578 DL 573
DL
Sbjct: 358 DL 359
>SB_31295| Best HMM Match : Exo_endo_phos (HMM E-Value=7.1e-11)
Length = 548
Score = 32.3 bits (70), Expect = 0.43
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN-------NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVL 579
+L GDFN + W +P N LL+I D H+L PT R+ + N+L
Sbjct: 299 ILAGDFNAPDIDWVNPENPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNTQNIL 357
Query: 578 DL 573
DL
Sbjct: 358 DL 359
>SB_45939| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00051)
Length = 575
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSN----NYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDL 573
+L GDF+ + W +P N LL+I D H+L PT R+ N+LDL
Sbjct: 295 ILAGDFDAPDIDWVNPENPDKLTSASKRLLDITDDHDLNQFVK-EPTRRNGNIQNILDL 352
>SB_44234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 31.5 bits (68), Expect = 0.76
Identities = 29/109 (26%), Positives = 46/109 (42%)
Frame = -3
Query: 746 QPFLLMGDFNCSHMSWGSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSI 567
+P LMGDFN + L D+ L PT + ++ ++D
Sbjct: 117 KPCYLMGDFNLDLLKHEKSEFPTRFFNQLSSSDFVPLIT----KPTRLTSHTATLIDNMF 172
Query: 566 CSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRN 420
C+ S + F+ SDH PI ++ + NTN +K R Y+I+N
Sbjct: 173 CNRPNFSQIADILFNDL--SDHLPIF-HICTNDENTNPRKTRQTYTIQN 218
>SB_54022| Best HMM Match : UPF0058 (HMM E-Value=2.4)
Length = 213
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/76 (25%), Positives = 38/76 (50%)
Frame = -3
Query: 314 DESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKL 135
DE PVK + + + P+ AI+++++A YL + EN++L ++ E +
Sbjct: 26 DEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRRRARNEATQQ 84
Query: 134 FKKKKFDSWRKFCSEI 87
+K + WR +E+
Sbjct: 85 RRKAIKEYWRLKTAEL 100
>SB_42168| Best HMM Match : NolV (HMM E-Value=7.1)
Length = 414
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -3
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI+++++A YL + EN++L
Sbjct: 20 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRR 78
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 79 RARNEATQQRRKAIKEYWR 97
>SB_9018| Best HMM Match : NolV (HMM E-Value=2.7)
Length = 426
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/79 (22%), Positives = 39/79 (49%)
Frame = -3
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ ++ + DE PVK + + + P+ AI+++++A YL + EN++L
Sbjct: 20 WNSLMNDILDEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRR 78
Query: 161 KSITETRKLFKKKKFDSWR 105
++ E + +K + WR
Sbjct: 79 RARNEATQQRRKAIKEYWR 97
>SB_16239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 31.1 bits (67), Expect = 1.00
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -3
Query: 509 SDHYPII--INLPFKNINTNTQKPRMKYSIRNNDW--DVFKQNVDMKINQVQSDYCSA-- 348
SDH II + +P + R I + W D+ + + SD C+
Sbjct: 52 SDHSAIICDVEMPKPCASKKILYRRPLRKINLDSWCNDIRDSAIYSSASSDDSD-CNVLC 110
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D ++ +L D+ PV+ S P PW+D+ + +++AE Y++
Sbjct: 111 DQYSTVLHHFIDKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 161
>SB_47673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 31.1 bits (67), Expect = 1.00
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSE--LLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSIC 564
L+ GDFN S +SW S + E EI++ H L +N PT +LDL I
Sbjct: 1111 LISGDFNMSKISWASEEQSLGARERSFTEILNDHYLSQMNH-FPT----RGDKILDLVIT 1165
Query: 563 SANLASSLNWSTFSSTLG--SDHYPIIINLPFKNINTNTQ 450
+A+ +N + G SDH + + +I+T+ Q
Sbjct: 1166 NASDQVCVNEVLSPNEAGVFSDHELTMSSNENSDIDTDWQ 1205
>SB_8907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 776
Score = 31.1 bits (67), Expect = 1.00
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -3
Query: 509 SDHYPII--INLPFKNINTNTQKPRMKYSIRNNDW--DVFKQNVDMKINQVQSDYCSA-- 348
SDH II + +P + R I + W D+ + + SD C+
Sbjct: 48 SDHSAIICDVEMPKPCASKKILYRRPLRKINLDSWCNDIRDSAIYSSASSDDSD-CNVLC 106
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D ++ +L D+ PV+ S P PW+D+ + +++AE Y++
Sbjct: 107 DQYSTVLHHFIDKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 157
>SB_5006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 657
Score = 31.1 bits (67), Expect = 1.00
Identities = 22/66 (33%), Positives = 29/66 (43%)
Frame = +1
Query: 169 KSKFSELVYAK*FISASFLLLMASEHSLSHQGGEGILPLETLLTGNDSSAASINILVKLS 348
K KF ELV A I+AS L+A+ +H+G + L SAA + K
Sbjct: 530 KGKFEELVVASNEITASTAQLVAASRVKAHRGSNKLQALHGASKDVVESAAGVVASAKTG 589
Query: 349 AEQ*SD 366
AE D
Sbjct: 590 AEMIED 595
>SB_54431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1023
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Frame = -3
Query: 521 STLGS-DHYPIIINLPFKNINTNTQKPRM-KYSIRNNDWDVFKQNVDM----KINQVQSD 360
S +GS DHYPI+I N K + + ++R ++ D F + + I +Q+
Sbjct: 471 SKMGSCDHYPILIKTNLSVTNPKAHKSSVWRRNLRRSNLDAFGRWITQFCWNTILSLQTA 530
Query: 359 YCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEA 213
+ F ++ +A + P++RV + + PW I R++A
Sbjct: 531 REKFERFFTVITDAVNTYLPLQRV-QVCATNKPWIGTSLCSLIARRQKA 578
>SB_24508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = -3
Query: 269 SPPWWDNECSEAIKSRKEAEMNYLAYTSSENF---DLLSKSITETRKLFKKKKFDSWRKF 99
S PW+D EC I+ + Y N D+L++ +K K+KK + +
Sbjct: 14 SKPWFDEECKIEIEKENIRSLGYRISKEPNNHSLRDVLNRERRIFKKTCKRKKENHYANI 73
Query: 98 CSEISPDIQPS-AVWQKIHRFRSLYKESKST 9
+ I D + S ++W+++ + K +K++
Sbjct: 74 INNI--DFRNSKSLWRQLKNCFHIGKSTKAS 102
>SB_20189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = -3
Query: 353 SADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENF 174
+A+ F K ++ AD PV G+ P W EAIK R A ++
Sbjct: 83 AAEFFNKTFLDVADIFAPVSTKRVGRPQQPQWMSPGIYEAIKHRDALLKKACASNYQADW 142
Query: 173 DLLSKSITETRKLFKKKK 120
+ T +L +K K
Sbjct: 143 SAYKQQRNATFQLIRKAK 160
>SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061)
Length = 1445
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = -3
Query: 353 SADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENF 174
+A+ F K ++ AD PV G+ P W EAIK R A ++
Sbjct: 82 AAEFFNKTFLDVADIFAPVSTKRVGRPQQPQWMSPGIYEAIKHRDALLKKACASNYQADW 141
Query: 173 DLLSKSITETRKLFKKKK 120
+ T +L +K K
Sbjct: 142 SAYKQQRNATFQLIRKAK 159
>SB_8662| Best HMM Match : MTH865 (HMM E-Value=7.9)
Length = 184
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/70 (25%), Positives = 35/70 (50%)
Frame = -3
Query: 314 DESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKL 135
DE PVK + + + P+ AI+++++A YL + EN++L ++ E +
Sbjct: 6 DEVAPVKTM-RVRDKDVPYMTTGWKSAIRAKRKANAKYLKDKTPENWELRRRARNEATQQ 64
Query: 134 FKKKKFDSWR 105
+K + WR
Sbjct: 65 RRKAIKEYWR 74
>SB_41296| Best HMM Match : RVT_1 (HMM E-Value=2.8e-24)
Length = 568
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = -3
Query: 509 SDHYPII--INLPFKNINTNTQKPRMKYSIRNNDW--DVFKQNVDMKINQVQSDYCSA-- 348
SDH II +++P + R I + W D+ + + SD C+
Sbjct: 48 SDHSAIICDVDMPKPCASKKRLHRRPLRKINLDSWCNDIRDSAIYSSASSDDSD-CNVLC 106
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D ++ +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 107 DQYSTVLNHFIEKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 157
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.7
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 7/179 (3%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGS--PS--NNYYGSELLEIID-YHNLCVLNSGSPTTRSRASSNVLDL 573
++ GDFNC + W + PS N+ S + +++D N ++ + TR S LDL
Sbjct: 365 VISGDFNCGDIDWRNDPPSITNHSTASMMQKLLDLISNNALIQHVTKPTRP-VSLKTLDL 423
Query: 572 SICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRM--KYSIRNNDWDVFK 399
I S S + + D IN + I T K + K + DV K
Sbjct: 424 VISSTPALVS-DITIHPGMSDHDIVKFNINTKTRRIKTPPHKVYLYNKMDLAALKRDVAK 482
Query: 398 QNVDMKINQVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSR 222
+ D + + SF + +++A ES R +K K S PW I+ R
Sbjct: 483 LSEDFTLCCEERSLEENWSFFEDRLKSAVESHIPYRFTKSK-TSLPWITQSVKRQIRKR 540
>SB_47788| Best HMM Match : Cir_Bir_Yir (HMM E-Value=8.6)
Length = 294
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/100 (22%), Positives = 44/100 (44%)
Frame = -3
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
F + E + P++R+ + P+P W D + ++++++ M ++ + +
Sbjct: 5 FNTLFTECIERHAPLRRIKVTRPPAP-WMDCDEIRELQAKRDKLMREAHTKNTVDSWVAF 63
Query: 161 KSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHR 42
+SI K K S R F + +P VW+ IHR
Sbjct: 64 RSIRNRIKSVINK---SKRAFITNALSSKRPKDVWRVIHR 100
>SB_18197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1153
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSE--LLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSIC 564
L+ GDFN S +SW S + E EI++ H L +N PT +LDL I
Sbjct: 892 LISGDFNMSKISWASEEQSLGARERSFTEILNDHYLSQMNH-FPT----RGDKILDLVIT 946
Query: 563 SAN 555
+A+
Sbjct: 947 NAS 949
>SB_53870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -3
Query: 509 SDHYPII--INLPFKNINTNTQKPRMKYSIRNNDW--DVFKQNVDMKINQVQSDYCSA-- 348
SDH II +++P + R I + W D+ + + SD C+
Sbjct: 48 SDHSAIICDVDMPKPCASKKILLRRPLRKINLDSWCNDIRDSAIYSSASSDDSD-CNVLC 106
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D ++ +L D+ PV+ S P PW+D+ + +++ E Y++
Sbjct: 107 DQYSTVLHHFIDKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKVERRYVS 157
>SB_10446| Best HMM Match : Exo_endo_phos (HMM E-Value=6.6e-20)
Length = 1285
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -3
Query: 509 SDHYPII--INLPFKNINTNTQKPRMKYSIRNNDW--DVFKQNVDMKINQVQSDYCSA-- 348
SDH II +++P + R I + W D+ + + SD C+
Sbjct: 907 SDHSAIICDVDMPKPCASKKILHRRPLRKINFDSWCNDIRDSAIYSSASSDDSD-CNVLC 965
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 966 DQYNTVLNHFIEKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 1016
>SB_58162| Best HMM Match : Exo_endo_phos (HMM E-Value=1.2e-14)
Length = 624
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L D+ PV+ S P PW+D+ + +++AE Y++
Sbjct: 524 DQYNTVLNHFIDKHAPVRTFSVTLRPYLPWYDDSLKLLKRQKRKAERRYVS 574
>SB_37969| Best HMM Match : COLFI (HMM E-Value=0.03)
Length = 405
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = -3
Query: 629 LNSGSPTTRSRASSNVLDLSICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQ 450
++ G+ T S N L C N S ++T +HY ++ K+ N +
Sbjct: 3 VSKGTLTAVLARSPNTQGLLSCQLQWNDKYNSSLVANT-SYNHYSRAVDTALKDFIWNAK 61
Query: 449 KPRMKYSIRNNDWD 408
KP++KY+ ++D
Sbjct: 62 KPKVKYTTIIGEYD 75
>SB_3206| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00047)
Length = 256
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGS--PS-NNYYGSELLE-IIDYHNLCVLNSGSPTTRSRASSNVLDLS 570
++ GDFNC ++W S PS N+ + ++ ++D+ + L AS N LDL
Sbjct: 136 VIAGDFNCGDINWNSDPPSITNHASAPMMNYLLDFISNNALTQHVLHPTRPASLNTLDL- 194
Query: 569 ICSANLA 549
+ S++LA
Sbjct: 195 VLSSSLA 201
>SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44)
Length = 759
Score = 29.5 bits (63), Expect = 3.0
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 3/130 (2%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSICSA 558
+++GD NC + N +L I + + L L + PT + S +++D + S+
Sbjct: 182 VILGDLNCCLLKKKVFDNKT--KKLKSIYEAYQLSQLIN-EPTRITIDSKSLIDHFVTSS 238
Query: 557 NLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFK---QNVD 387
+N S SDH +I + N + K + S NDWD FK V+
Sbjct: 239 --PDKINSSGVIHIGPSDH-SLIYGIRKINPYRDKLKRKAMVSKLRNDWDDFKASRNKVN 295
Query: 386 MKINQVQSDY 357
+ + Q +S+Y
Sbjct: 296 IALRQAKSNY 305
>SB_51124| Best HMM Match : DUF1106 (HMM E-Value=7)
Length = 305
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 332 ILIEAADESFPVKRVSKGKIP--SPPWWDNECSEAIKSRKEAEMNYLAYTSS 183
+L+E+ +S K K + WW+++ ++ K R+ E NY A TS+
Sbjct: 250 LLLESRQKSLEHHEREKRKYVKRNEEWWNSKILDSRKRRRNTESNYTATTSN 301
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGS--PS-NNYYGSELLE-IIDYHNLCVLNSGSPTTRSRASSNVLDLS 570
++ GDFNC ++W S PS N+ + ++ ++D+ + L AS N LDL
Sbjct: 79 VIAGDFNCGDINWNSDPPSITNHASAPMMNYLLDFISNNALTQHVLHPTRPASLNTLDLV 138
Query: 569 ICSA 558
+ S+
Sbjct: 139 LSSS 142
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 29.1 bits (62), Expect = 4.0
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 14/187 (7%)
Frame = -3
Query: 737 LLMGDFNCSHMSW-------GSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVL 579
++ GDFNC ++W +P+ ++LL+ ID H L S PT AS L
Sbjct: 92 VIAGDFNCGDINWKVSPPVITNPATASLMNKLLDFIDDHALTQYVS-DPT--RPASLKTL 148
Query: 578 DLSICSA--NLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQK---PRMKYSIRNND 414
D +CS+ +L S ++ S H+ I N P + T + RM +D
Sbjct: 149 DF-VCSSVPSLVSDVSVHPGMSDHDLVHFYINTN-PRRATRTPHKVYLFDRMNLEGLQHD 206
Query: 413 WDVFKQN--VDMKINQVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECS 240
D+ Q+ V V+ ++ F + A D + P K ++ P PW +
Sbjct: 207 MDLLNQSFMVSPLSRSVEENW---SIFKTGIKSAIDANVPHKMTNRK--PDVPWLNRALK 261
Query: 239 EAIKSRK 219
I+ R+
Sbjct: 262 RQIRKRE 268
>SB_34610| Best HMM Match : DUF1400 (HMM E-Value=0.73)
Length = 357
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -3
Query: 167 LSKSITETRKLFKKKKFDSW-RKFCSEISPDIQPSAVWQKIHRFRSL 30
L++ + + + ++KK D ++FC +SPD+ P W RFR L
Sbjct: 108 LAEGLKKAEREYEKKFTDGGTQEFCKRMSPDL-PFYYWTVNERFRDL 153
>SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 1273
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 49 DQYNTVLNHFIEKHVPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 99
>SB_52105| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0012)
Length = 241
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGS--PS-NNYYGSELLE-IIDYHNLCVLNSGSPTTRSRASSNVLDLS 570
++ GDFNC ++W S PS N+ + ++ ++D+ + L AS N LDL
Sbjct: 166 VIAGDFNCGDINWNSDPPSITNHASAPMMNYLLDFISNNALTQHVLHPTRPASLNTLDLV 225
Query: 569 ICSA 558
+ S+
Sbjct: 226 LSSS 229
>SB_47695| Best HMM Match : DUF1106 (HMM E-Value=8.5)
Length = 248
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 332 ILIEAADESFPVKRVSKGKIP--SPPWWDNECSEAIKSRKEAEMNYLAYTSS 183
+L+E+ +S K K + WW+++ ++ K R+ E NY A TS+
Sbjct: 193 LLLESRQKSLEHHEREKRKYVKRNEEWWNSKILDSRKRRRNTESNYTATTSN 244
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 29.1 bits (62), Expect = 4.0
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 14/187 (7%)
Frame = -3
Query: 737 LLMGDFNCSHMSW-------GSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVL 579
++ GDFNC ++W +P+ ++LL+ ID H L S PT AS L
Sbjct: 1482 VIAGDFNCGDINWKVSPPVITNPATASLMNKLLDFIDDHALTQYVS-DPT--RPASLKTL 1538
Query: 578 DLSICSA--NLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQK---PRMKYSIRNND 414
D +CS+ +L S ++ S H+ I N P + T + RM +D
Sbjct: 1539 DF-VCSSVPSLVSDVSVHPGMSDHDLVHFYINTN-PRRATRTPHKVYLFDRMNLEGLQHD 1596
Query: 413 WDVFKQN--VDMKINQVQSDYCSADSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECS 240
D+ Q+ V V+ ++ F + A D + P K ++ P PW +
Sbjct: 1597 MDLLNQSFMVSPLSRSVEENW---SIFKTGIKSAIDANVPHKMTNRK--PDVPWLNRALK 1651
Query: 239 EAIKSRK 219
I+ R+
Sbjct: 1652 RQIRKRE 1658
>SB_32642| Best HMM Match : IL10 (HMM E-Value=2.5)
Length = 544
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 332 ILIEAADESFPVKRVSKGKIP--SPPWWDNECSEAIKSRKEAEMNYLAYTSS 183
+L+E+ +S K K + WW+++ ++ K R+ E NY A TS+
Sbjct: 489 LLLESRQKSLEHHEREKRKYVKRNEEWWNSKILDSRKRRRNTESNYTATTSN 540
>SB_23193| Best HMM Match : Lipoprotein_17 (HMM E-Value=2.3)
Length = 711
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -3
Query: 332 ILIEAADESFPVKRVSKGKIP--SPPWWDNECSEAIKSRKEAEMNYLAYTSS 183
+L+E+ +S K K + WW+++ ++ K R+ E NY A TS+
Sbjct: 656 LLLESRQKSLEHHEREKRKYVKRNEEWWNSKILDSRKRRRNTESNYTATTSN 707
>SB_2999| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 630
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 49 DQYNTVLNHFIEKHVPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 99
>SB_35327| Best HMM Match : Cellulase (HMM E-Value=4e-05)
Length = 353
Score = 28.7 bits (61), Expect = 5.3
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Frame = -3
Query: 542 LNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQ---NVDMKINQ 372
L+ T + L SD Y +I F T P KY+ +N D DV+ + N+ ++ N
Sbjct: 17 LSEGTNTPILPSD-YQDVIKQGFSTNWFKTSDPLSKYNAQNID-DVYARGFRNLRLRCNA 74
Query: 371 --VQSDYCSA--DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMN 204
++ Y + D F L D+ V G P W ++ EA + ++A +N
Sbjct: 75 ELYKAPYTDSAFDDFLTSLATVVDKCIQV-----GVTPIISWIHHQ-DEAFAT-EQARLN 127
Query: 203 YLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSE 90
Y+A+ + L +S + LF + D CS+
Sbjct: 128 YVAWWTKVATHLKDRSYNLSFNLFTELGIDGCGNNCSK 165
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 587 DQYNTVLNHFIEKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 637
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 110 WRKFCSEISPDIQPSAVWQKIHRFRSLYKESKSTV 6
W+ C SP+ S VW+ + RFR L +E + +
Sbjct: 755 WQGNCVSHSPEALFSTVWKVVPRFRCLVEELRKVL 789
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = -3
Query: 230 KSRKEAEMNYLAYTSS-ENFDLLSKSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQ 54
+ ++E E+ +L S+ E + KS E K +F ++ S + +++ S +
Sbjct: 33 EEKEELELKFLNEKSAMEQQFRIEKSEWELSSSSSKAEFQKNQRDWSNLKTELEKSHR-E 91
Query: 53 KIHRFRSLYKESKST 9
KIH S Y++ KST
Sbjct: 92 KIHELESSYRKEKST 106
>SB_21418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 887
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 387 DQYNTVLNHFIEKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 437
>SB_8311| Best HMM Match : RVT_1 (HMM E-Value=3.9e-29)
Length = 605
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 39 DQYNTVLNHFIEKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 89
>SB_52393| Best HMM Match : LEA_4 (HMM E-Value=8)
Length = 203
Score = 28.7 bits (61), Expect = 5.3
Identities = 36/202 (17%), Positives = 83/202 (41%), Gaps = 4/202 (1%)
Frame = -3
Query: 614 PTTRSRASSNVLDLSICSANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMK 435
PT + S +LD+ + N S + SDH+ ++ + + ++ + +K
Sbjct: 7 PTRVTPTSDTLLDVIL--TNKPELFRASGVLNPEMSDHH-LVYGIMKERVSQHERKVVTF 63
Query: 434 YSIRNNDWDVFKQNVDMKINQVQSDYCSADS----FTKILIEAADESFPVKRVSKGKIPS 267
S ++ D + F +++ V + + D + + ++ P K++ K
Sbjct: 64 RSTKSLDVEKFNEDLSSAPWHVMETFDTMDDKYHYWETLFNTIVEKHMPTKKMRFRKA-D 122
Query: 266 PPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEI 87
P+ E +AIK +++ Y + EN++L K + +K + W++ ++
Sbjct: 123 VPYMTPEWKQAIKMKRKFAKQYAHSKTEENWELKRKWRNKATNCRRKAIKEYWQQKADDL 182
Query: 86 SPDIQPSAVWQKIHRFRSLYKE 21
+PS ++ F S K+
Sbjct: 183 K--AKPSEFYKTFRPFLSDKKQ 202
>SB_41523| Best HMM Match : bZIP_1 (HMM E-Value=8.8)
Length = 257
Score = 28.7 bits (61), Expect = 5.3
Identities = 45/244 (18%), Positives = 99/244 (40%), Gaps = 5/244 (2%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSELLEIIDYHNL-CVLNSGSPTTRSRASSNVLDLSICS 561
+L GD N + P G L+ + + L C++ PT + S +LD+ +
Sbjct: 7 VLTGDLNLDRLR---PERRE-GQILINLEEVFGLECLIKD--PTRVTPTSETLLDVIL-- 58
Query: 560 ANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMK 381
N S + SDH+ ++ + + ++ + +K S ++ D + F +++
Sbjct: 59 TNKPELFRASGVLNPEMSDHH-LVYGIMKERVSQHERKVVTFRSTKSLDVEKFNEDLSSA 117
Query: 380 INQVQSDYCSADS----FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEA 213
V + + D + + ++ P K++ K P+ E +AIK +++
Sbjct: 118 PWHVMETFDTMDDKYHYWETLFNTIVEKHMPTKKMRFRKA-DVPYMTPEWKQAIKMKRKF 176
Query: 212 EMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHRFRS 33
Y + EN++L K + +K + W++ ++ +PS ++ F S
Sbjct: 177 VKQYAHSKTEENWELKRKWRNKATNCRRKAIKEYWQQKADDLK--AKPSEFYKTFRPFLS 234
Query: 32 LYKE 21
K+
Sbjct: 235 DKKQ 238
>SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30)
Length = 575
Score = 28.3 bits (60), Expect = 7.0
Identities = 29/167 (17%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH+ ++ + + ++ + +K S ++ D + F +++ V + + D
Sbjct: 2 SDHH-LVYGIMKERVSQHERKVVTFRSTKSLDVEKFNEDLSSAPWHVMETFDTMDDKYHY 60
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ + ++ P K++ K P+ E +AIK +++ Y + EN++L
Sbjct: 61 WETLFNTIVEKHMPTKKMRFRKA-DVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWELKR 119
Query: 161 KSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHRFRSLYKE 21
K + +K + W++ ++ +PS ++ F S K+
Sbjct: 120 KWRNKATNCRRKAIKEYWQQKADDLK--AKPSKFYKTFRPFLSDKKQ 164
>SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1800
Score = 28.3 bits (60), Expect = 7.0
Identities = 29/167 (17%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH+ ++ + + ++ + +K S ++ D + F +++ V + + D
Sbjct: 1443 SDHH-LVYGIMKERVSQHERKVVTFRSTKSLDVEKFNEDLSSAPWHVMETFDTMDDKYHY 1501
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ + ++ P K++ K P+ E +AIK +++ Y + EN++L
Sbjct: 1502 WETLFNTIVEKHMPTKKMRFRKA-DVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWELKR 1560
Query: 161 KSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHRFRSLYKE 21
K + +K + W++ ++ +PS ++ F S K+
Sbjct: 1561 KWRNKATNCRRKAIKEYWQQKADDLK--AKPSEFYKTFRPFLSDKKQ 1605
>SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9)
Length = 324
Score = 28.3 bits (60), Expect = 7.0
Identities = 29/167 (17%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH+ ++ + + ++ + +K S ++ D + F +++ V + + D
Sbjct: 2 SDHH-LVYGIMKERVSQHERKVVTFRSTKSLDVEKFNEDLSSAPWHVMETFDTMDDKYHY 60
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ + ++ P K++ K P+ E +AIK +++ Y + EN++L
Sbjct: 61 WETLFNTIVEKHMPTKKMRFRKA-DVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWELKR 119
Query: 161 KSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHRFRSLYKE 21
K + +K + W++ ++ +PS ++ F S K+
Sbjct: 120 KWRNKATNCRRKAIKEYWQQKADDLK--AKPSKFYKTFRPFLSDKKQ 164
>SB_23154| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADSFTKI 330
S + P+ I + + NT S ++DW F + KIN ++Y S DS T +
Sbjct: 263 STNDPLSIGILLIILVFNTSNNNDYVSDESDDWVPFDHDGRRKIN---NNYESYDSDTSM 319
Query: 329 LIEAADESFPVKRVSKGKIPSPP 261
L + ES + V++ P+PP
Sbjct: 320 LSDLDGESDEEEEVNR-DAPTPP 341
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 28.3 bits (60), Expect = 7.0
Identities = 45/244 (18%), Positives = 100/244 (40%), Gaps = 5/244 (2%)
Frame = -3
Query: 737 LLMGDFNCSHMSWGSPSNNYYGSELLEIIDYHNL-CVLNSGSPTTRSRASSNVLDLSICS 561
+L GD N + P G L+ + + L C++ PT + S +LD+ +
Sbjct: 1005 VLAGDLNLDRLR---PERRE-GQILINLEEVFGLECLIKD--PTRVTPTSETLLDVIL-- 1056
Query: 560 ANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMK 381
N S + SDH+ ++ + + ++ + +K S ++ D + F +++
Sbjct: 1057 TNKPELFRASGVLNPEMSDHH-LVYGIMKERVSQHERKVVTFRSTKSLDVEKFNEDLSSA 1115
Query: 380 INQVQSDYCSADS----FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEA 213
V + + + + + ++ P K++ K P+ E +AIK +++
Sbjct: 1116 PWHVMETFDTMEDKYHYWETLFNTIVEKHMPTKKMRFRKA-DVPYMTPEWKQAIKMKRKF 1174
Query: 212 EMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHRFRS 33
Y + EN++L K +T +K + W++ ++ +PS ++ F S
Sbjct: 1175 AKQYAHSKTEENWELKRKWRNKTTNGRRKAIKEYWQQKADDLK--AKPSEFYKTFRPFLS 1232
Query: 32 LYKE 21
K+
Sbjct: 1233 DKKQ 1236
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -3
Query: 494 IIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSD-YCSAD 345
+ +NL KN N + ++P ++ ++ DW K +D K+N +D YCS D
Sbjct: 619 LYVNL--KN-NVDAERPAIENGLKKIDWGAAKLTLD-KLNLKPADAYCSDD 665
>SB_25123| Best HMM Match : LEA_4 (HMM E-Value=8)
Length = 294
Score = 28.3 bits (60), Expect = 7.0
Identities = 29/167 (17%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Frame = -3
Query: 509 SDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYCSADS---- 342
SDH+ ++ + + ++ + +K S ++ D + F +++ V + + D
Sbjct: 96 SDHH-LVYGIMKERVSQHERKVVTFRSTKSLDVEKFNEDLSSAPWHVMETFDTMDDKYHY 154
Query: 341 FTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLAYTSSENFDLLS 162
+ + ++ P K++ K P+ E +AIK +++ Y + EN++L
Sbjct: 155 WETLFNTIVEKHMPTKKMRFRKA-DVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWELKR 213
Query: 161 KSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQKIHRFRSLYKE 21
K + +K + W++ ++ +PS ++ F S K+
Sbjct: 214 KWRNKATNCRRKAIKEYWQQKADDLK--AKPSEFYKTFRPFLSDKKQ 258
>SB_15785| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -3
Query: 173 DLLSKSITETRKLFKKKKFDSWRKFCSEISPDIQ 72
D L+K+I E ++ FKK+K + W++ ++Q
Sbjct: 313 DKLNKAILEEQEKFKKEKDELWKELNDSFQKELQ 346
>SB_11056| Best HMM Match : FaeA (HMM E-Value=5.6)
Length = 261
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 107 DQYNTVLNHFIEKHAPVRTFSVTLRPYSPWYDDTLRLLKRQKRKAERRYVS 157
>SB_59558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 264 WGGDFTLRDPLNWK*FIRCFNQYFSEAVSRTVIRLHLINFHIYILFKYIPVVVSDTIFHS 443
WGG+ L W F+ C N F + + RL + + ++P V ++F +
Sbjct: 471 WGGEALLAGK-GWAVFLMCLNAVFILVSTLYLARLPRNRTPLPFMVPFVPWVPLVSVFVN 529
Query: 444 RFLSIRIN 467
FL ++++
Sbjct: 530 VFLMLKLS 537
>SB_47354| Best HMM Match : RVT_1 (HMM E-Value=2e-07)
Length = 773
Score = 27.9 bits (59), Expect = 9.3
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = -3
Query: 347 DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAIKSRKEAEMNYLA 195
D + +L ++ PV+ S P PW+D+ + +++AE Y++
Sbjct: 207 DQYNTMLNHFIEKHAPVRTFSVTLRPYSPWYDDSLRLLKRQKRKAERRYVS 257
>SB_44003| Best HMM Match : DUF658 (HMM E-Value=1.1)
Length = 572
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3
Query: 629 LNSGSPTTRSRASSNVLDLSICSANLASSLNWSTFSS 519
LNS + T+ S +S++ LS CS++ SS + S+ SS
Sbjct: 201 LNSSTSTSSSLSSASSSSLSSCSSSSLSSFSSSSSSS 237
>SB_33578| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
Length = 888
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = -3
Query: 749 PQPFLLMGDFNCSHMSWGSPSNNYYG----SELLEIID 648
P L+GDFN H+ W S ++ G SE L +ID
Sbjct: 381 PPAIYLLGDFNFRHVDWVSVTHRNGGELCPSESLAVID 418
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,909,122
Number of Sequences: 59808
Number of extensions: 378245
Number of successful extensions: 1342
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 1266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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