BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0928 (751 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 75 7e-14 AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 51 8e-07 AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical ... 31 1.2 Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical pr... 28 8.1 >AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical protein R11E3.3 protein. Length = 931 Score = 74.5 bits (175), Expect = 7e-14 Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 5/151 (3%) Frame = -3 Query: 737 LLMGDFNCSHMSWGSP-SNNYYGSELLEIIDYH-NLCVLNSGSPTTRSRASSNVLDLSIC 564 ++ GD N H +W S S + G EL E+ID H +L + N T S + D++IC Sbjct: 35 IISGDVNAHHSAWHSEGSEDTRGRELAELIDLHPDLIIQNEQVHTRADTYSISSPDITIC 94 Query: 563 SANLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDM 384 +A+LA+ +WST LGSDH P + L T + R+ + + +W +F+ +++ Sbjct: 95 TADLATKCHWSTLYK-LGSDHIP--MKLKINQAATPKRPKRLVANFKKANWQLFRDHIES 151 Query: 383 KINQVQS--DYCSADS-FTKILIEAADESFP 300 +IN D + F K+++EA ++ P Sbjct: 152 RINGYSGPMDAIPMEKFFNKVILEADKKAVP 182 >AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical protein F21E9.1 protein. Length = 1170 Score = 51.2 bits (117), Expect = 8e-07 Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 11/255 (4%) Frame = -3 Query: 737 LLMGDFNCSHMSWGSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSICSA 558 +L GD N ++W S +++ + + NL PT S +SSN+LDL CSA Sbjct: 468 ILAGDLNFPQINWSSANSSLH--PFASFLSSINLSQ-KVQFPTRLSASSSNILDLVACSA 524 Query: 557 NLASSLNWSTFSSTLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDVFKQNVDMKI 378 ++ S L+ S + L SDH + +P + ++ P + S + +D K N + + Sbjct: 525 DI-SILHLSPQPALLNSDHLSVSFKIPILS-PIDSPCPTSQDSNSSPMFDYKKCNFPL-L 581 Query: 377 NQVQ----SDYCSA-------DSFTKILIEAADESFPVKRVSKGKIPSPPWWDNECSEAI 231 N+ + ++CS D IL P K +S K PSP + + Sbjct: 582 NRARVNWDFEFCSQKSVSEKFDRLLSILNNLLTLHCPTKSISVSKSPSP---YHNIHRKL 638 Query: 230 KSRKEAEMNYLAYTSSENFDLLSKSITETRKLFKKKKFDSWRKFCSEISPDIQPSAVWQK 51 K R +++ L + F+++ + ++ RKL++ ++RK+ DI ++ + K Sbjct: 639 K-RLRNKISKLILSRKCTFEIIKTAQSKYRKLYR-----NFRKYVRRFENDIIANSNFTK 692 Query: 50 IHRFRSLYKESKSTV 6 I R + +S++ V Sbjct: 693 IRRLINSRLKSQNLV 707 >AC006832-7|AAF39999.1| 505|Caenorhabditis elegans Hypothetical protein ZK355.5 protein. Length = 505 Score = 30.7 bits (66), Expect = 1.2 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Frame = -3 Query: 656 IIDYHNLCVLNSGSPTTRSRASSNVLDLS-ICSANLASSLNWSTFSSTLGSDHYPIIINL 480 I++Y N VLN G + +S N++ LS + + W+ + I++ Sbjct: 201 ILEYQNCTVLNGGLRLSNFSSSENLMALSKVKQIKGDVEIQWNNITGLFFLKSLTTILST 260 Query: 479 PFK-------NINTNTQKPRMKYSIRNNDWDVFKQNVDMKINQVQSDYC 354 + NI+ N + R+ + N WD++ + + + D+C Sbjct: 261 NGRGRKKVIVNIHDNYEMKRLGFEKINLFWDLYGGKFFINLQNLHPDFC 309 >Z81068-6|CAB02986.1| 725|Caenorhabditis elegans Hypothetical protein F25H5.5 protein. Length = 725 Score = 27.9 bits (59), Expect = 8.1 Identities = 22/99 (22%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Frame = -3 Query: 698 GSPSNNYYGSELLEIIDYHNLCVLNSGSPTTRSRASSNVLDLSICSANLASSLNW-STFS 522 GS +N+ ++++ + + L + + T S+++L+L S ++ S + T Sbjct: 225 GSTVSNFDSRSEADVVEKNGVVQLPTMTEITGG--SNDILNLCPGSFGVSQSAGFPDTLQ 282 Query: 521 STLGSDHYPIIINLPFKNINTNTQKPRMKYSIRNNDWDV 405 + D INLP + + ++ KPR++ S ++ DV Sbjct: 283 MLIEEDTTERKINLPQNSTSVSSDKPRLEESESEDEDDV 321 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,212,295 Number of Sequences: 27780 Number of extensions: 300184 Number of successful extensions: 926 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 924 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1777507862 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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