BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0927 (687 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI00006CD10C Cluster: Tubulin-tyrosine ligase family p... 36 0.93 UniRef50_Q54NR4 Cluster: Putative uncharacterized protein; n=3; ... 34 2.8 UniRef50_Q7S3B2 Cluster: Predicted protein; n=2; Neurospora cras... 34 3.7 UniRef50_Q79LY0 Cluster: Effector protein hopD2; n=1; Pseudomona... 33 4.9 UniRef50_A4FXB2 Cluster: GCN5-related N-acetyltransferase; n=1; ... 33 6.5 UniRef50_Q5BW83 Cluster: SJCHGC07914 protein; n=1; Schistosoma j... 33 8.6 >UniRef50_UPI00006CD10C Cluster: Tubulin-tyrosine ligase family protein; n=1; Tetrahymena thermophila SB210|Rep: Tubulin-tyrosine ligase family protein - Tetrahymena thermophila SB210 Length = 1160 Score = 35.9 bits (79), Expect = 0.93 Identities = 13/46 (28%), Positives = 25/46 (54%) Frame = -1 Query: 210 FFVNGLRSNAPFNFVLFEHKMFSENVITNTDNTHRLLCNTNHNEPV 73 F++ LRS+ F + + + + + N+HR+ N NHN+P+ Sbjct: 790 FYLERLRSHPTFKHLYYSNSQSQKQHMNKRKNSHRISVNHNHNDPI 835 >UniRef50_Q54NR4 Cluster: Putative uncharacterized protein; n=3; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 734 Score = 34.3 bits (75), Expect = 2.8 Identities = 24/95 (25%), Positives = 41/95 (43%) Frame = -1 Query: 366 CTSEFLYLNAFQGGHAFEFRIMQLKRFNPVFFFIQA*RRVTFFDRCLRFHGFFFVNGLRS 187 C S +YLN + + + ++ F +++ R D F + N + Sbjct: 324 CIS-IIYLNLNESNNIIFKNVNEINELYKSLFLLKSDRNQILLD----FIYDQYSNNNKD 378 Query: 186 NAPFNFVLFEHKMFSENVITNTDNTHRLLCNTNHN 82 N FNF+L KM+ EN +N D + +L N N + Sbjct: 379 NEKFNFILKLLKMYFENCNSNHDEFYSMLLNNNRH 413 >UniRef50_Q7S3B2 Cluster: Predicted protein; n=2; Neurospora crassa|Rep: Predicted protein - Neurospora crassa Length = 1144 Score = 33.9 bits (74), Expect = 3.7 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = -1 Query: 447 GVPA-PRTAAGPNFAERSRNAGLPFPADCT--SEFLYLNAFQGGHAFEFRIMQLKR 289 G PA P + P+++ +S +AGLP P D S +FQGG A R+ LKR Sbjct: 661 GYPASPIQGSPPSYSSQSHSAGLPSPKDSADRSGPSRRQSFQGGGAPAMRVGSLKR 716 >UniRef50_Q79LY0 Cluster: Effector protein hopD2; n=1; Pseudomonas syringae pv. tomato|Rep: Effector protein hopD2 - Pseudomonas syringae pv. tomato Length = 468 Score = 33.5 bits (73), Expect = 4.9 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = -1 Query: 207 FVNGLRSNAPFNFVLFEHKMFSEN-VITNTDNTHRLLCNTNHNEPVG*NLYQLITVSKYV 31 +V G +SN P L + SE V+T T+R + T+HN P +L+ + ++ Sbjct: 309 YVKGKKSN-PQTTELKNLNVRSEREVVTEAGATYRRVAITDHNRPSPEATDELVDIMRHC 367 Query: 30 CRASESLV--CN 1 +A+ESLV CN Sbjct: 368 LQANESLVVHCN 379 >UniRef50_A4FXB2 Cluster: GCN5-related N-acetyltransferase; n=1; Methanococcus maripaludis|Rep: GCN5-related N-acetyltransferase - Methanococcus maripaludis Length = 135 Score = 33.1 bits (72), Expect = 6.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 529 TVYGNLNKSNALSISDFDGNVVNVLIFPSFKKCI 630 TV N+ + AL +GN+V VLIF + KC+ Sbjct: 24 TVIKNIERKTALFTKSDNGNIVGVLIFSYYSKCL 57 >UniRef50_Q5BW83 Cluster: SJCHGC07914 protein; n=1; Schistosoma japonicum|Rep: SJCHGC07914 protein - Schistosoma japonicum (Blood fluke) Length = 230 Score = 32.7 bits (71), Expect = 8.6 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -1 Query: 159 EHKMFSENVITNTDNTHRLLCNTNHNEPVG*NLYQLITVS 40 E+ + N +TNTD+TH LL N + V +L ITVS Sbjct: 145 ENALHRNNFLTNTDDTHSLLLRENSGQVVVSDLSNDITVS 184 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 654,318,183 Number of Sequences: 1657284 Number of extensions: 13494148 Number of successful extensions: 31465 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 30454 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 31459 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 53719013270 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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