Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0925
(626 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 38 0.007
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 35 0.051
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 0.83
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 31 0.83
At5g29070.1 68418.m03617 expressed protein 30 1.1
At5g41100.2 68418.m04997 expressed protein 29 1.9
At5g41100.1 68418.m04996 expressed protein 29 1.9
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 1.9
At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putati... 29 3.3
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 28 4.4
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 28 4.4
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 28 4.4
At1g30420.1 68414.m03718 ATP-binding cassette transport protein,... 28 4.4
At5g31873.1 68418.m03777 hypothetical protein 28 5.8
At5g28120.1 68418.m03396 hypothetical protein 28 5.8
At5g28110.1 68418.m03395 hypothetical protein 28 5.8
At3g30816.1 68416.m03949 hypothetical protein 28 5.8
At5g46830.1 68418.m05769 basic helix-loop-helix (bHLH) family pr... 27 7.7
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 27 7.7
At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit... 27 7.7
At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit... 27 7.7
At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit... 27 7.7
At1g30410.1 68414.m03717 ATP-binding cassette transport protein,... 27 7.7
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 126 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHA-APVEH-SSYIHASPVVQH 299
VRH P +H +P +SH++P + ++P + H+ P+V A +PV+ SS +SP
Sbjct: 165 VRHSSPP---VSHSSPPVSHSSPPTSRSSPAVSHSSPVVAASSPVKAVSSSTASSPRAAS 221
Query: 300 FSP 308
SP
Sbjct: 222 PSP 224
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 34.7 bits (76), Expect = 0.051
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +3
Query: 150 QATAHYTPVLSHAAPVLTHAAPLIQHAGP--IVHAAPV--EHSSYIHASPVVQHFS--PV 311
Q+TA+Y S P + H P ++H P + H+ P +H Y P V+H+S PV
Sbjct: 24 QSTANY--FYSSPPPPVKHYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPPPVKHYSPPPV 81
Query: 312 QHAP 323
H+P
Sbjct: 82 YHSP 85
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 75 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 134
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 135 PPVYHSP 141
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 103 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 162
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 163 PPVYHSP 169
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 131 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 190
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 191 PPVYHSP 197
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 159 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 218
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 219 PPVYHSP 225
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 187 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 246
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 247 PPVYHSP 253
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 215 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 274
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 275 PPVYHSP 281
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 243 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 302
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 303 PPVYHSP 309
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 271 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 330
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 331 PPVYHSP 337
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 299 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 358
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 359 PPVYHSP 365
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 13/67 (19%)
Frame = +3
Query: 162 HYTPV-LSHAAP------VLTHAAPLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS- 305
HY+P + H+ P V P ++H P + H+ P Y++ SP V+H+S
Sbjct: 327 HYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSP 386
Query: 306 -PVQHAP 323
PV H+P
Sbjct: 387 PPVYHSP 393
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Frame = +3
Query: 213 PLIQHAGP--IVHAAPVEHSSYIHASPV--VQHFS--PVQHAP 323
P ++H P + H+ P Y++ SP V+H+S PV H+P
Sbjct: 71 PPVKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSP 113
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 0.83
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 346 QLPSNTPIMSKIMLPRSMSSHIPSRIPTPAI-----TSPNTKPV 462
Q P+ + S++ P S S+ PS+ PTP + +PN+KPV
Sbjct: 726 QAPTTSSETSQVPTPSSESNQSPSQAPTPILEPVHAPTPNSKPV 769
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 30.7 bits (66), Expect = 0.83
Identities = 21/52 (40%), Positives = 25/52 (48%)
Frame = -3
Query: 549 RCGGQLCIRPCGWNHQAEVESIRLSRHHHHGFRVGTCDRRCGDPRRNMRTHT 394
RCG C R C H +S S G RV TC ++CG PR + R HT
Sbjct: 720 RCGMHACARTC---HPEPCDSFNESEA---GMRV-TCRQKCGAPRTDCR-HT 763
>At5g29070.1 68418.m03617 expressed protein
Length = 307
Score = 30.3 bits (65), Expect = 1.1
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +2
Query: 194 STDSRSPFDST-CRSYCSRRPRGTFFVYTCFASSPTLQPCATCSSRAPR 337
+T R P D T C S RP T T SSPT +P +CS AP+
Sbjct: 93 ATLDRRPTDWTRCGSDTQPRPWATQGATTGPESSPTCRPTGSCSVAAPQ 141
>At5g41100.2 68418.m04997 expressed protein
Length = 582
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +3
Query: 126 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 305
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 306 ----PVQHA------PVVHHAAIPIAVE 359
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At5g41100.1 68418.m04996 expressed protein
Length = 586
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Frame = +3
Query: 126 VRHDEPSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFS 305
+R PS A TPV S ++P+ T H+ + H++P+E H +S
Sbjct: 346 MRQMTPSANAYILPTPVDSKSSPIFTKPVTQTNHSANLWHSSPLEPIKTAHKDAESNLYS 405
Query: 306 ----PVQHA------PVVHHAAIPIAVE 359
P +HA P +P+AV+
Sbjct: 406 RLPRPSEHAFSGPLKPSSTRLPVPVAVQ 433
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 201 THAAPLIQHAGPIVHAAPVEHSSYIHASPVVQHFSPVQHAPVVHHAAIP 347
T P H+ P +P Y ++SP H SP H+P H+ P
Sbjct: 535 TRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPP 583
>At3g53140.1 68416.m05856 O-diphenol-O-methyl transferase, putative
similar to GI:6688808 [Medicago sativa subsp. x varia],
caffeic acid O-methyltransferase (homt1), Populus
kitakamiensis, EMBL:PKHOMT1A
Length = 359
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 177 LSHAAPVLTHAAPLIQHAGPIVHAAPVE 260
LS+AA VL H + A P+VH A VE
Sbjct: 115 LSYAAYVLQHHQEALMRAWPLVHTAVVE 142
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 1/85 (1%)
Frame = +3
Query: 141 PSHQATAHYTPVLSHAAPVLTHAAPLIQHAGPIVHAAP-VEHSSYIHASPVVQHFSPVQH 317
P+ + PV S A H + + P ++ P +HSSY H S
Sbjct: 61 PNPNPPQYTRPVTSPATQQQQHLSQPLVRPPPQAYSRPWQQHSSYTHFSSASSPLLSSSS 120
Query: 318 APVVHHAAIPIAVEHSDHVEDHAPA 392
AP +++PI+ + + PA
Sbjct: 121 APASSSSSLPISGQQRGGMAIGVPA 145
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 162 HYTP--VLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS----YIHASPVVQHFSPVQHAP 323
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 324 VVHH 335
+HH
Sbjct: 165 TLHH 168
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +3
Query: 162 HYTP--VLSHAAPVLTHAAPLIQHAGPIVHAAPVEHSS----YIHASPVVQHFSPVQHAP 323
HY+P V P + H +P + P PV+H S Y P V+H+SP
Sbjct: 108 HYSPPPVYKSPPPPVKHYSPPPVYKSP---PPPVKHYSPPPVYKSPPPPVKHYSPPPSYT 164
Query: 324 VVHH 335
+HH
Sbjct: 165 TLHH 168
>At1g30420.1 68414.m03718 ATP-binding cassette transport protein,
putative contains Pfam profiles PF00005: ABC
transporter, PF00664: ABC transporter transmembrane
region
Length = 1488
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 136 SWRTMLWEDTAWPWPSSITPPWQIAKIEQTTAILKNMLRCLTE 8
SW T L + + P + WQ+ + +QT ++K RC TE
Sbjct: 241 SWMTPLMQ-LGYRKPITERDVWQLDQWDQTETLIKRFQRCWTE 282
>At5g31873.1 68418.m03777 hypothetical protein
Length = 271
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 435 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 304
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 196 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 238
>At5g28120.1 68418.m03396 hypothetical protein
Length = 506
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 435 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 304
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 394 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 436
>At5g28110.1 68418.m03395 hypothetical protein
Length = 493
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 435 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 304
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 394 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 436
>At3g30816.1 68416.m03949 hypothetical protein
Length = 342
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 435 RRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGARLEHVAQG 304
+R DPR N+R R H L +D V + G+ + HVA G
Sbjct: 231 KRMLDPRANLRPTEERFHGLAYDDPVDESTDPW-GSIVHHVAGG 273
>At5g46830.1 68418.m05769 basic helix-loop-helix (bHLH) family
protein
Length = 511
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 447 QHETRDGDVVKGEYSLLQPDGSIRKVEYTADHHNG 551
++E + +++K E +++ D ++ +VE DHH G
Sbjct: 424 KYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPG 458
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 361 TPIMSKIMLPRSMSSHIPSRIPTPAITSPNTKP 459
+PI S P + S+ S +PA+TSP T P
Sbjct: 23 SPISSPTKSPTTPSAPTTSPTKSPAVTSPTTAP 55
>At4g36690.3 68417.m05206 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 565
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 483 RLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRH-DRSVRRQLESQ 337
R SRH H G R G + R R+HD R DR RR S+
Sbjct: 99 RSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSR 148
>At4g36690.2 68417.m05207 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 542
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 483 RLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRH-DRSVRRQLESQ 337
R SRH H G R G + R R+HD R DR RR S+
Sbjct: 99 RSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSR 148
>At4g36690.1 68417.m05205 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit [Nicotiana plumbaginifolia] GI:3850823
Length = 573
Score = 27.5 bits (58), Expect = 7.7
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = -3
Query: 483 RLSRHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRH-DRSVRRQLESQ 337
R SRH H G R G + R R+HD R DR RR S+
Sbjct: 99 RSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRRRDDRGGRRSRRSR 148
>At1g30410.1 68414.m03717 ATP-binding cassette transport protein,
putative similar to MgATP-energized glutathione
S-conjugate pump [Arabidopsis thaliana] GI:2909781;
contains Pfam profiles PF00005: ABC transporter,
PF00664: ABC transporter transmembrane region
Length = 1495
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -2
Query: 73 WQIAKIEQTTAILKNMLRCLTE 8
WQ+ K +QT ++K RC TE
Sbjct: 261 WQLDKWDQTETLIKRFQRCWTE 282
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,536,064
Number of Sequences: 28952
Number of extensions: 346189
Number of successful extensions: 1324
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1275599520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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