BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0923 (481 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 36 0.62 UniRef50_Q30RM7 Cluster: GTP-binding; n=1; Thiomicrospira denitr... 34 1.4 UniRef50_A7BTM1 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5 UniRef50_Q0BJZ2 Cluster: Putative uncharacterized protein; n=2; ... 32 7.7 >UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized protein - Plasmodium berghei Length = 275 Score = 35.5 bits (78), Expect = 0.62 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = +2 Query: 392 LHCLKYLNQXXXXXXTRGGARYPIRPIVSR 481 L+ NQ RGGARYPIRPIVSR Sbjct: 244 LYVRNEFNQAYRYRRPRGGARYPIRPIVSR 273 >UniRef50_Q30RM7 Cluster: GTP-binding; n=1; Thiomicrospira denitrificans ATCC 33889|Rep: GTP-binding - Thiomicrospira denitrificans (strain ATCC 33889 / DSM 1351) Length = 205 Score = 34.3 bits (75), Expect = 1.4 Identities = 20/50 (40%), Positives = 25/50 (50%) Frame = +1 Query: 154 KYYWDRNTTDRIAQKEGKNYSLIYISLVHCTTPVYFVFKMTCDFWLISIN 303 KY W+RN TD IA ++ I+I LV C P + K DF L N Sbjct: 100 KYDWERNLTDYIASRK---QIKIFIHLVDCRHPFLDIDKSVSDFLLECAN 146 >UniRef50_A7BTM1 Cluster: Putative uncharacterized protein; n=1; Beggiatoa sp. PS|Rep: Putative uncharacterized protein - Beggiatoa sp. PS Length = 1020 Score = 33.5 bits (73), Expect = 2.5 Identities = 17/44 (38%), Positives = 27/44 (61%) Frame = -2 Query: 189 NSICSISIPVVFLSTLTLNFNFECTLNEHQIKYLKLLISIEIKN 58 N + ++S P++FL LT + C NE+Q KYLK + +E+ N Sbjct: 190 NKLTNLSYPLLFLRNLT-EITWYCN-NENQGKYLKTIKPLEVNN 231 >UniRef50_Q0BJZ2 Cluster: Putative uncharacterized protein; n=2; Francisella tularensis subsp. holarctica|Rep: Putative uncharacterized protein - Francisella tularensis subsp. holarctica (strain OSU18) Length = 131 Score = 31.9 bits (69), Expect = 7.7 Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Frame = -2 Query: 384 VNYIKLFSKVSIGSKMYFYLSIIIYAMINGN*PEIASHFEYKIYRCGTVY**NVY*RI-I 208 +NYIKLFS+ +I +Y ++++I +FE ++ +++ I + Sbjct: 13 INYIKLFSRTAIVLFIYLIINLVIAFRFT------MENFEASVFLSALYMLDDIFTLIGL 66 Query: 207 FTFLLRNSICSISIPVVFLSTLTLNFNFECTLNEHQIKYL 88 +LR IC + + V F+ T +N F +L ++ + L Sbjct: 67 VLAILRYRICLLFLVVGFILTALINIYFIFSLPQYYLHSL 106 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 438,423,934 Number of Sequences: 1657284 Number of extensions: 7767937 Number of successful extensions: 16157 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 15687 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16156 length of database: 575,637,011 effective HSP length: 94 effective length of database: 419,852,315 effective search space used: 27290400475 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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