Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0923
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   7.8  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   7.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   7.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 216  RIIFTFLLRNSICSISIPVVFLSTL 142
            +++FTFL+ NS+  I   V+FL TL
Sbjct: 1224 KMVFTFLMLNSLYVI---VIFLLTL 1245


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 216  RIIFTFLLRNSICSISIPVVFLSTL 142
            +++FTFL+ NS+  I   V+FL TL
Sbjct: 1224 KMVFTFLMLNSLYVI---VIFLLTL 1245


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/38 (23%), Positives = 22/38 (57%)
 Frame = +1

Query: 229 SLVHCTTPVYFVFKMTCDFWLISINHSINYNR*IKVHF 342
           S ++  T ++F F + CDF  + + + ++  R  +V++
Sbjct: 66  SYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNY 103


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 194 KRKVKIIL*YTFH*YTVPHLY 256
           K  VKI L + FH YT   L+
Sbjct: 487 KPDVKIFLPFRFHIYTPEDLF 507


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -1

Query: 337 VLLFIYYNLCYD*WK 293
           VL+F Y ++C + W+
Sbjct: 218 VLIFTYTSICIEIWQ 232


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 348 GSKMYFYLSIIIYAMINGN 292
           G   YF++S   Y    GN
Sbjct: 236 GVSFYFFISTFFYFFTTGN 254


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/19 (36%), Positives = 9/19 (47%)
 Frame = -2

Query: 348 GSKMYFYLSIIIYAMINGN 292
           G   YF++S   Y    GN
Sbjct: 232 GVSFYFFISTFFYFFTTGN 250


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,491
Number of Sequences: 336
Number of extensions: 2399
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)