Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0922
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 31 0.97
SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_40538| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_15501| Best HMM Match : Not1 (HMM E-Value=4.6e-37) 30 1.7
SB_29526| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086) 28 5.2
SB_32263| Best HMM Match : Ldh_1_C (HMM E-Value=8.80015e-42) 28 6.9
SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14) 27 9.1
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 30.7 bits (66), Expect = 0.97
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 370 CLFRIQSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRN--TSNTQYTYLSP 531
CLF I + SP+ S P+ P SP+PL PL S + TS++ T SP
Sbjct: 161 CLFSISAYFPSPLTSSS--PLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSP 214
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 397 TSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPL 540
TSP P P+ P S +PL PL S + + SP+PL
Sbjct: 186 TSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPL 233
>SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 11 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 58
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 23 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRY 70
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 119 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPVARRY 166
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 137 PIARRYPIARRYPIARRYPIARRYPVARRYPIARRYPIARGYPIARRY 184
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 5 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 52
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R Y
Sbjct: 17 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGY 64
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 95 PIARGYPIARRYPIARGYPIARRYPIARRYPIARRYPIARGYPIARRY 142
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R +P+ R +Y P+ R+Y
Sbjct: 113 PIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRY 160
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ P P+ R++P+ R +Y P+ R+Y
Sbjct: 125 PIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPVARRYPIARRY 172
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R Y P+ R Y
Sbjct: 29 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARGY 76
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R +P+ R Y P+ R+Y
Sbjct: 41 PIARRYPIARRYPIARRYPIARGYPIARRYPIARGYPIARGYPIARRY 88
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ +Y P+ R+Y
Sbjct: 83 PIARRYPIARRYPIARGYPIARRYPIARGYPIARRYPIARRYPIARRY 130
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ P P+ R++P+ R Y P+ R+Y
Sbjct: 101 PIARRYPIARGYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRY 148
>SB_40538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 76 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 123
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 82 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 129
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 94 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRY 141
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 190 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRY 237
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 208 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 255
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 214 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 261
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 220 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 267
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 226 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 273
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 232 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 279
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 238 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 285
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 244 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 291
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 256 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPVARRYPIARRY 303
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 250 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPVARRY 297
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R Y P+ R+Y
Sbjct: 100 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRY 147
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R Y P+ R+Y
Sbjct: 172 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRY 219
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ P P+ R++P+ R +Y P+ R+Y
Sbjct: 64 PIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 111
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 70 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 117
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R Y
Sbjct: 88 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGY 135
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R +P+ R +Y P+ R+Y
Sbjct: 112 PIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRY 159
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ R +Y P+ R Y
Sbjct: 118 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARGY 165
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R +P+ R +Y P+ R+Y
Sbjct: 148 PIARRYPIARRYPIARGYPIARGYPIARRYPIARRYPIARRYPIARRY 195
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ P P+ R++P+ R +Y P+ R+Y
Sbjct: 154 PIARRYPIARGYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRY 201
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 166 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRY 213
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R +P+ R +Y P+ R+Y
Sbjct: 184 PIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRY 231
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ P P+ R++P+ R +Y P+ R+Y
Sbjct: 196 PIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 243
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R YP+ + P P+ R++P+ R +Y P+ R+Y
Sbjct: 202 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 249
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ +Y P+ R+Y
Sbjct: 106 PIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRY 153
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R YP+ + P P+ R++P+ R Y P+ R+Y
Sbjct: 130 PIARGYPIARRYPIARRYPIARRYPIARRYPIARGYPIARGYPIARRY 177
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552
P R+YP+ + P P+ R++P+ +Y P+ R+Y
Sbjct: 178 PIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRY 225
>SB_15501| Best HMM Match : Not1 (HMM E-Value=4.6e-37)
Length = 509
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -1
Query: 212 VSFLVTEADTFVPSIAFVTAVAFIATSEIMSSIRSYVIDAPFVLFLLFDCLRCAF 48
VS V EA F S + A+ F + ++ +I V D P + + F CLRC F
Sbjct: 275 VSDPVLEAINFQVSDPLLEAINFQVSDPVLEAINFQVSD-PVLEAINFQCLRCRF 328
>SB_29526| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -1
Query: 212 VSFLVTEADTFVPSIAFVTAVAFIATSEIMSSIRSYVIDAPFVLFLLFDCLRCAF 48
VS V EA F S + A+ F + ++ +I V D P + + F CLRC F
Sbjct: 883 VSDPVLEAINFQVSDPLLEAINFQVSDPVLEAINFQVSD-PVLEAINFQCLRCRF 936
>SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1191
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Frame = -1
Query: 566 LDFIRYFLFNGVGLRYVYWVF-------DVFLDGKGNFLFNGVGLRYGHFHLIGYFLLDG 408
L + YF GV R + W D D G + L YGH ++ Y LLDG
Sbjct: 724 LQRVSYFRNTGVRWRSLSWKLNSTFDWEDAIQDAMGTSMSLAKALYYGHVYVAQYPLLDG 783
Query: 407 I 405
I
Sbjct: 784 I 784
>SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086)
Length = 404
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 10/59 (16%)
Frame = -1
Query: 515 YWVFDVF----LDGKGNFLFNGVGLR------YGHFHLIGYFLLDGIGDVFLDCIRNRH 369
YWVF + ++G G ++F +G+R Y F L+G +++G G + +R RH
Sbjct: 278 YWVFGLLSVRVIEGSGYWVFGLLGVRVIEGSGYLMFGLLGVRVIEGSGYWVFELLRVRH 336
>SB_32263| Best HMM Match : Ldh_1_C (HMM E-Value=8.80015e-42)
Length = 411
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 372 APSLPPQQF*CARGVHDDRGGSRLRWQL 289
APS+P + F C + +RGGS++ +L
Sbjct: 222 APSIPKENFSCLTRLDQNRGGSQIAGRL 249
>SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 107 YVIDAPFVLFLLFDCLRCAFLLL 39
YVI P L L DCL C F+++
Sbjct: 41 YVIGVPMCLVLTDDCLLCRFIVM 63
>SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14)
Length = 910
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 153 RSLHRYLRNYVLHKILCHRCPFCLVSSLR 67
R+L+R+L HK CPFCL +R
Sbjct: 220 RNLNRFLSRQTKHKGRMFYCPFCLHGFVR 248
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,461,354
Number of Sequences: 59808
Number of extensions: 253642
Number of successful extensions: 852
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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