BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0922 (611 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 31 0.97 SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_40538| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3 SB_15501| Best HMM Match : Not1 (HMM E-Value=4.6e-37) 30 1.7 SB_29526| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7 SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0 SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086) 28 5.2 SB_32263| Best HMM Match : Ldh_1_C (HMM E-Value=8.80015e-42) 28 6.9 SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9 SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14) 27 9.1 >SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) Length = 620 Score = 30.7 bits (66), Expect = 0.97 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = +1 Query: 370 CLFRIQSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRN--TSNTQYTYLSP 531 CLF I + SP+ S P+ P SP+PL PL S + TS++ T SP Sbjct: 161 CLFSISAYFPSPLTSSS--PLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLTSSSP 214 Score = 29.5 bits (63), Expect = 2.2 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +1 Query: 397 TSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPL 540 TSP P P+ P S +PL PL S + + SP+PL Sbjct: 186 TSPSPLTSPSPLTSSSPLTSSSPLTSSSPLTSSSPLTSSSPLTSPSPL 233 >SB_3371| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1135 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 11 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 58 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 23 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRY 70 Score = 29.9 bits (64), Expect = 1.7 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 119 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPVARRY 166 Score = 29.9 bits (64), Expect = 1.7 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 137 PIARRYPIARRYPIARRYPIARRYPVARRYPIARRYPIARGYPIARRY 184 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 5 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 52 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R Y Sbjct: 17 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGY 64 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 95 PIARGYPIARRYPIARGYPIARRYPIARRYPIARRYPIARGYPIARRY 142 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R +P+ R +Y P+ R+Y Sbjct: 113 PIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRY 160 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ P P+ R++P+ R +Y P+ R+Y Sbjct: 125 PIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPVARRYPIARRY 172 Score = 27.5 bits (58), Expect = 9.1 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R Y P+ R Y Sbjct: 29 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARGY 76 Score = 27.5 bits (58), Expect = 9.1 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R +P+ R Y P+ R+Y Sbjct: 41 PIARRYPIARRYPIARRYPIARGYPIARRYPIARGYPIARGYPIARRY 88 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/48 (25%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ +Y P+ R+Y Sbjct: 83 PIARRYPIARRYPIARGYPIARRYPIARGYPIARRYPIARRYPIARRY 130 Score = 27.5 bits (58), Expect = 9.1 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ P P+ R++P+ R Y P+ R+Y Sbjct: 101 PIARRYPIARGYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRY 148 >SB_40538| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 307 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 76 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 123 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 82 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 129 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 94 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRY 141 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 190 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRY 237 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 208 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 255 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 214 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 261 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 220 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 267 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 226 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 273 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 232 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 279 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 238 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 285 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 244 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 291 Score = 30.3 bits (65), Expect = 1.3 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 256 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPVARRYPIARRY 303 Score = 29.9 bits (64), Expect = 1.7 Identities = 13/48 (27%), Positives = 23/48 (47%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 250 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPVARRY 297 Score = 29.1 bits (62), Expect = 3.0 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R Y P+ R+Y Sbjct: 100 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRY 147 Score = 29.1 bits (62), Expect = 3.0 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R Y P+ R+Y Sbjct: 172 PIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRY 219 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ P P+ R++P+ R +Y P+ R+Y Sbjct: 64 PIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 111 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 70 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 117 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R Y Sbjct: 88 PIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGY 135 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R +P+ R +Y P+ R+Y Sbjct: 112 PIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRY 159 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ R +Y P+ R Y Sbjct: 118 PIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARGY 165 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R +P+ R +Y P+ R+Y Sbjct: 148 PIARRYPIARRYPIARGYPIARGYPIARRYPIARRYPIARRYPIARRY 195 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ P P+ R++P+ R +Y P+ R+Y Sbjct: 154 PIARRYPIARGYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRY 201 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 166 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARGYPIARRY 213 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R +P+ R +Y P+ R+Y Sbjct: 184 PIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRYPIARRY 231 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ P P+ R++P+ R +Y P+ R+Y Sbjct: 196 PIARRYPIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 243 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R YP+ + P P+ R++P+ R +Y P+ R+Y Sbjct: 202 PIARGYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRYPIARRY 249 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/48 (25%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ +Y P+ R+Y Sbjct: 106 PIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRY 153 Score = 27.5 bits (58), Expect = 9.1 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R YP+ + P P+ R++P+ R Y P+ R+Y Sbjct: 130 PIARGYPIARRYPIARRYPIARRYPIARRYPIARGYPIARGYPIARRY 177 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/48 (25%), Positives = 22/48 (45%) Frame = +1 Query: 409 PSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTPLKRKY 552 P R+YP+ + P P+ R++P+ +Y P+ R+Y Sbjct: 178 PIARRYPIARRYPIARRYPIARRYPIARGYPIARRYPIARRYPIARRY 225 >SB_15501| Best HMM Match : Not1 (HMM E-Value=4.6e-37) Length = 509 Score = 29.9 bits (64), Expect = 1.7 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -1 Query: 212 VSFLVTEADTFVPSIAFVTAVAFIATSEIMSSIRSYVIDAPFVLFLLFDCLRCAF 48 VS V EA F S + A+ F + ++ +I V D P + + F CLRC F Sbjct: 275 VSDPVLEAINFQVSDPLLEAINFQVSDPVLEAINFQVSD-PVLEAINFQCLRCRF 328 >SB_29526| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1120 Score = 29.9 bits (64), Expect = 1.7 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -1 Query: 212 VSFLVTEADTFVPSIAFVTAVAFIATSEIMSSIRSYVIDAPFVLFLLFDCLRCAF 48 VS V EA F S + A+ F + ++ +I V D P + + F CLRC F Sbjct: 883 VSDPVLEAINFQVSDPLLEAINFQVSDPVLEAINFQVSD-PVLEAINFQCLRCRF 936 >SB_28906| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1191 Score = 29.1 bits (62), Expect = 3.0 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 7/61 (11%) Frame = -1 Query: 566 LDFIRYFLFNGVGLRYVYWVF-------DVFLDGKGNFLFNGVGLRYGHFHLIGYFLLDG 408 L + YF GV R + W D D G + L YGH ++ Y LLDG Sbjct: 724 LQRVSYFRNTGVRWRSLSWKLNSTFDWEDAIQDAMGTSMSLAKALYYGHVYVAQYPLLDG 783 Query: 407 I 405 I Sbjct: 784 I 784 >SB_24584| Best HMM Match : bZIP_1 (HMM E-Value=0.0086) Length = 404 Score = 28.3 bits (60), Expect = 5.2 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 10/59 (16%) Frame = -1 Query: 515 YWVFDVF----LDGKGNFLFNGVGLR------YGHFHLIGYFLLDGIGDVFLDCIRNRH 369 YWVF + ++G G ++F +G+R Y F L+G +++G G + +R RH Sbjct: 278 YWVFGLLSVRVIEGSGYWVFGLLGVRVIEGSGYLMFGLLGVRVIEGSGYWVFELLRVRH 336 >SB_32263| Best HMM Match : Ldh_1_C (HMM E-Value=8.80015e-42) Length = 411 Score = 27.9 bits (59), Expect = 6.9 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -3 Query: 372 APSLPPQQF*CARGVHDDRGGSRLRWQL 289 APS+P + F C + +RGGS++ +L Sbjct: 222 APSIPKENFSCLTRLDQNRGGSQIAGRL 249 >SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 501 Score = 27.9 bits (59), Expect = 6.9 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -1 Query: 107 YVIDAPFVLFLLFDCLRCAFLLL 39 YVI P L L DCL C F+++ Sbjct: 41 YVIGVPMCLVLTDDCLLCRFIVM 63 >SB_56313| Best HMM Match : zf-C2H2 (HMM E-Value=2.3e-14) Length = 910 Score = 27.5 bits (58), Expect = 9.1 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = -3 Query: 153 RSLHRYLRNYVLHKILCHRCPFCLVSSLR 67 R+L+R+L HK CPFCL +R Sbjct: 220 RNLNRFLSRQTKHKGRMFYCPFCLHGFVR 248 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,461,354 Number of Sequences: 59808 Number of extensions: 253642 Number of successful extensions: 852 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 842 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1499981500 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -