BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0922 (611 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75531-12|CAA99806.4| 348|Caenorhabditis elegans Hypothetical p... 28 6.0 AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 27 8.0 >Z75531-12|CAA99806.4| 348|Caenorhabditis elegans Hypothetical protein C54D10.6 protein. Length = 348 Score = 27.9 bits (59), Expect = 6.0 Identities = 11/39 (28%), Positives = 21/39 (53%) Frame = -1 Query: 152 VAFIATSEIMSSIRSYVIDAPFVLFLLFDCLRCAFLLLG 36 + IAT ++S+I + ++ P+ +F C RC + G Sbjct: 283 LCLIATHGLLSTITTIMVHKPYRVFFFILCRRCLLMPAG 321 >AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical protein Y95B8A.7 protein. Length = 608 Score = 27.5 bits (58), Expect = 8.0 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +1 Query: 379 RIQSRNTSPIPSRRKYPMR*KCPYLSP-TPLKRKFPLPSRNTSNTQYTYLSP 531 R Q + + +P+ + P K P+ +P P R+F + T N +Y L+P Sbjct: 221 RSQEKRKNQLPAVHEPPSFMKTPWFAPPAPEGREFNIVDDRTINEKYAGLNP 272 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,797,293 Number of Sequences: 27780 Number of extensions: 189372 Number of successful extensions: 631 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 602 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 630 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1321669750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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