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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0922
         (611 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ...    30   1.4  
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ...    30   1.4  
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    29   3.2  
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ...    29   3.2  
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ...    29   3.2  
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ...    28   4.2  
At3g52680.1 68416.m05803 F-box family protein contains F-box dom...    28   5.6  
At3g44670.1 68416.m04804 disease resistance protein RPP1-Ws[A,C]...    28   5.6  
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR...    28   5.6  
At1g61050.1 68414.m06873 alpha 1,4-glycosyltransferase family pr...    28   5.6  
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea...    27   9.8  
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea...    27   9.8  

>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
           3-ketoacyl-CoA thiolase, putative strong similarity to
           Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
           sativus] GI:1542941; contains InterPro accession
           IPR002155: Thiolase
          Length = 403

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 458 GLRYGHFHLIGYFLLDGIGDVFLDC 384
           G R+GH  L+   L DG+ DV+ DC
Sbjct: 140 GSRFGHDSLVDGMLKDGLWDVYNDC 164


>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
           3-ketoacyl-CoA thiolase, putative strong similarity to
           Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
           sativus] GI:1542941; contains InterPro accession
           IPR002155: Thiolase
          Length = 398

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 458 GLRYGHFHLIGYFLLDGIGDVFLDC 384
           G R+GH  L+   L DG+ DV+ DC
Sbjct: 135 GSRFGHDSLVDGMLKDGLWDVYNDC 159


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3

Query: 63  PSVCLSPPWQRQPRPTMPP 7
           PS C SPP + QP+P  PP
Sbjct: 48  PSPCPSPPPKPQPKPVPPP 66


>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 407

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 397 TSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSP---TPLKRK 549
           +SP P R + P R     +  +P++R+ PLP R  S       SP   +P++R+
Sbjct: 273 SSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRR 326


>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
           (SR45) similar to arginine/serine-rich protein
           GI:6601502 from [Arabidopsis thaliana]
          Length = 414

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 397 TSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSP---TPLKRK 549
           +SP P R + P R     +  +P++R+ PLP R  S       SP   +P++R+
Sbjct: 280 SSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRR 333


>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
           ankyrin repeats, Pfam:PF00023
          Length = 513

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 108 LCHRCPFCLVSSLRLPSVCLSPP 40
           LC RC   L SS  +PSV + PP
Sbjct: 331 LCVRCALYLCSSSNVPSVTVGPP 353


>At3g52680.1 68416.m05803 F-box family protein contains F-box domain
           Pfam:PF00646
          Length = 456

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 107 YVIDAPFVLFLLFDCLRC 54
           YVI+APF+ +LL + LRC
Sbjct: 238 YVINAPFLKYLLIEELRC 255


>At3g44670.1 68416.m04804 disease resistance protein
           RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain
           signature TIR-NBS-LRR exists, suggestive of a disease
           resistance protein. Closest Col-0 homolog to both RPP1
           Ws-A and RPP1 Ws-C
          Length = 872

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 362 KEGACSVYSRETRPLYRREESTL*GESARTSA 457
           K G C +  RETR L R     L  ES+R S+
Sbjct: 787 KIGECGILQRETRSLRRSSSPDLSPESSRVSS 818


>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1194

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +2

Query: 362  KEGACSVYSRETRPLYRREESTL*GESARTSA 457
            K G C +  RETR L R     L  ES+R S+
Sbjct: 1155 KIGECGILQRETRSLRRSSSPDLSPESSRVSS 1186


>At1g61050.1 68414.m06873 alpha 1,4-glycosyltransferase family
           protein / glycosyltransferase sugar-binding DXD
           motif-containing protein low similarity to
           alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens
           [gi:5726306], Gb3 synthase, Rattus norvegicus
           [gi:9082162] ; contains Pfam profiles PF04572: Alpha
           1,4-glycosyltransferase conserved region, PF04488:
           Glycosyltransferase sugar-binding region containing DXD
           motif
          Length = 435

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -3

Query: 177 ALHSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSSLRL 64
           A+H +       R     ++H+++ H C FC  SSL L
Sbjct: 397 AVHLWNRESKKLRIEEGSIIHQLMSHSCIFCNSSSLHL 434


>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
           family protein contains 6 WD-40 repeats (PF00400) (1
           weak); similar to ARP2/3 complex 41 kDa subunit
           (P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
           (SP:O88656) [Rattus norvegicus]
          Length = 378

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -2

Query: 70  STAFGVPFSSLAKATTANDATK 5
           S AFG  + S +K+TTANDA++
Sbjct: 305 SEAFGKFYGSQSKSTTANDASE 326


>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
           family protein contains 6 WD-40 repeats (PF00400) (1
           weak); similar to ARP2/3 complex 41 kDa subunit
           (P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
           (SP:O88656) [Rattus norvegicus]
          Length = 378

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -2

Query: 70  STAFGVPFSSLAKATTANDATK 5
           S AFG  + S +K+TTANDA++
Sbjct: 305 SEAFGKFYGSQSKSTTANDASE 326


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,427,692
Number of Sequences: 28952
Number of extensions: 184670
Number of successful extensions: 587
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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