BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0922 (611 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 30 1.4 At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 30 1.4 At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 29 3.2 At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 29 3.2 At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 29 3.2 At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 4.2 At3g52680.1 68416.m05803 F-box family protein contains F-box dom... 28 5.6 At3g44670.1 68416.m04804 disease resistance protein RPP1-Ws[A,C]... 28 5.6 At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 28 5.6 At1g61050.1 68414.m06873 alpha 1,4-glycosyltransferase family pr... 28 5.6 At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 27 9.8 At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 27 9.8 >At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 403 Score = 29.9 bits (64), Expect = 1.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 458 GLRYGHFHLIGYFLLDGIGDVFLDC 384 G R+GH L+ L DG+ DV+ DC Sbjct: 140 GSRFGHDSLVDGMLKDGLWDVYNDC 164 >At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative strong similarity to Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus sativus] GI:1542941; contains InterPro accession IPR002155: Thiolase Length = 398 Score = 29.9 bits (64), Expect = 1.4 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -1 Query: 458 GLRYGHFHLIGYFLLDGIGDVFLDC 384 G R+GH L+ L DG+ DV+ DC Sbjct: 135 GSRFGHDSLVDGMLKDGLWDVYNDC 159 >At1g20130.1 68414.m02518 family II extracellular lipase, putative contains Pfam profile PF00657: GDSL-like Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566) Length = 1006 Score = 28.7 bits (61), Expect = 3.2 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -3 Query: 63 PSVCLSPPWQRQPRPTMPP 7 PS C SPP + QP+P PP Sbjct: 48 PSPCPSPPPKPQPKPVPPP 66 >At1g16610.2 68414.m01990 arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana] Length = 407 Score = 28.7 bits (61), Expect = 3.2 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = +1 Query: 397 TSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSP---TPLKRK 549 +SP P R + P R + +P++R+ PLP R S SP +P++R+ Sbjct: 273 SSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRR 326 >At1g16610.1 68414.m01989 arginine/serine-rich protein, putative (SR45) similar to arginine/serine-rich protein GI:6601502 from [Arabidopsis thaliana] Length = 414 Score = 28.7 bits (61), Expect = 3.2 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = +1 Query: 397 TSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSP---TPLKRK 549 +SP P R + P R + +P++R+ PLP R S SP +P++R+ Sbjct: 280 SSPPPRRYRSPPRGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRR 333 >At5g07270.1 68418.m00829 ankyrin repeat family protein contains ankyrin repeats, Pfam:PF00023 Length = 513 Score = 28.3 bits (60), Expect = 4.2 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -3 Query: 108 LCHRCPFCLVSSLRLPSVCLSPP 40 LC RC L SS +PSV + PP Sbjct: 331 LCVRCALYLCSSSNVPSVTVGPP 353 >At3g52680.1 68416.m05803 F-box family protein contains F-box domain Pfam:PF00646 Length = 456 Score = 27.9 bits (59), Expect = 5.6 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -1 Query: 107 YVIDAPFVLFLLFDCLRC 54 YVI+APF+ +LL + LRC Sbjct: 238 YVINAPFLKYLLIEELRC 255 >At3g44670.1 68416.m04804 disease resistance protein RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Closest Col-0 homolog to both RPP1 Ws-A and RPP1 Ws-C Length = 872 Score = 27.9 bits (59), Expect = 5.6 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 362 KEGACSVYSRETRPLYRREESTL*GESARTSA 457 K G C + RETR L R L ES+R S+ Sbjct: 787 KIGECGILQRETRSLRRSSSPDLSPESSRVSS 818 >At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1194 Score = 27.9 bits (59), Expect = 5.6 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +2 Query: 362 KEGACSVYSRETRPLYRREESTL*GESARTSA 457 K G C + RETR L R L ES+R S+ Sbjct: 1155 KIGECGILQRETRSLRRSSSPDLSPESSRVSS 1186 >At1g61050.1 68414.m06873 alpha 1,4-glycosyltransferase family protein / glycosyltransferase sugar-binding DXD motif-containing protein low similarity to alpha-1,4-N-acetylglucosaminyltransferase, Homo sapiens [gi:5726306], Gb3 synthase, Rattus norvegicus [gi:9082162] ; contains Pfam profiles PF04572: Alpha 1,4-glycosyltransferase conserved region, PF04488: Glycosyltransferase sugar-binding region containing DXD motif Length = 435 Score = 27.9 bits (59), Expect = 5.6 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = -3 Query: 177 ALHSFRDRRSLHRYLRNYVLHKILCHRCPFCLVSSLRL 64 A+H + R ++H+++ H C FC SSL L Sbjct: 397 AVHLWNRESKKLRIEEGSIIHQLMSHSCIFCNSSSLHL 434 >At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400) (1 weak); similar to ARP2/3 complex 41 kDa subunit (P41-ARC) (Actin-related protein 2/3 complex subunit 1B) (SP:O88656) [Rattus norvegicus] Length = 378 Score = 27.1 bits (57), Expect = 9.8 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -2 Query: 70 STAFGVPFSSLAKATTANDATK 5 S AFG + S +K+TTANDA++ Sbjct: 305 SEAFGKFYGSQSKSTTANDASE 326 >At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat family protein contains 6 WD-40 repeats (PF00400) (1 weak); similar to ARP2/3 complex 41 kDa subunit (P41-ARC) (Actin-related protein 2/3 complex subunit 1B) (SP:O88656) [Rattus norvegicus] Length = 378 Score = 27.1 bits (57), Expect = 9.8 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = -2 Query: 70 STAFGVPFSSLAKATTANDATK 5 S AFG + S +K+TTANDA++ Sbjct: 305 SEAFGKFYGSQSKSTTANDASE 326 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,427,692 Number of Sequences: 28952 Number of extensions: 184670 Number of successful extensions: 587 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 556 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 587 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1226538000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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