BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0920
(705 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous pro... 47 2e-05
BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p pro... 47 2e-05
AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB... 47 2e-05
AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA... 47 2e-05
M19969-1|AAA28941.1| 1097|Drosophila melanogaster protein ( Dros... 29 4.7
AE014297-3998|AAN14086.1| 1097|Drosophila melanogaster CG5490-PB... 29 4.7
AE014297-3997|AAF56624.1| 1097|Drosophila melanogaster CG5490-PA... 29 4.7
BT024393-1|ABC86455.1| 353|Drosophila melanogaster IP05211p pro... 29 8.1
AE014297-4373|AAF56889.2| 1433|Drosophila melanogaster CG2005-PE... 29 8.1
>U11288-1|AAA67715.1| 1091|Drosophila melanogaster diaphanous
protein protein.
Length = 1091
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/39 (48%), Positives = 31/39 (79%)
Frame = +2
Query: 587 RAARVSMENIQKSLKKMENDIKALEMDLNNSRVQQCPDD 703
+A+RV+M+ IQK++++M + +K LE DL N++V QC DD
Sbjct: 876 KASRVNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDD 914
>BT021398-1|AAX33546.1| 1091|Drosophila melanogaster LD14246p
protein.
Length = 1091
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/39 (48%), Positives = 31/39 (79%)
Frame = +2
Query: 587 RAARVSMENIQKSLKKMENDIKALEMDLNNSRVQQCPDD 703
+A+RV+M+ IQK++++M + +K LE DL N++V QC DD
Sbjct: 876 KASRVNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDD 914
>AE014134-3281|AAN11087.1| 1091|Drosophila melanogaster CG1768-PB,
isoform B protein.
Length = 1091
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/39 (48%), Positives = 31/39 (79%)
Frame = +2
Query: 587 RAARVSMENIQKSLKKMENDIKALEMDLNNSRVQQCPDD 703
+A+RV+M+ IQK++++M + +K LE DL N++V QC DD
Sbjct: 876 KASRVNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDD 914
>AE014134-3280|AAF53922.1| 1091|Drosophila melanogaster CG1768-PA,
isoform A protein.
Length = 1091
Score = 47.2 bits (107), Expect = 2e-05
Identities = 19/39 (48%), Positives = 31/39 (79%)
Frame = +2
Query: 587 RAARVSMENIQKSLKKMENDIKALEMDLNNSRVQQCPDD 703
+A+RV+M+ IQK++++M + +K LE DL N++V QC DD
Sbjct: 876 KASRVNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDD 914
>M19969-1|AAA28941.1| 1097|Drosophila melanogaster protein (
Drosophila melanogastertoll mRNA required for
dorsal-ventral embryonic polarity,complete cds. ).
Length = 1097
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 512 PVHRSIRSHDDFKSLPSHPAFFISYRAARVSM-ENIQKSLKK--MENDIKALEMDLNNSR 682
P + +R + +SLP F S + +S+ +N+ K+L +E+ + L +DL+N+R
Sbjct: 319 PELQILRLRAELQSLPGD-LFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNR 377
Query: 683 VQQCPD 700
+ PD
Sbjct: 378 LTHLPD 383
>AE014297-3998|AAN14086.1| 1097|Drosophila melanogaster CG5490-PB,
isoform B protein.
Length = 1097
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 512 PVHRSIRSHDDFKSLPSHPAFFISYRAARVSM-ENIQKSLKK--MENDIKALEMDLNNSR 682
P + +R + +SLP F S + +S+ +N+ K+L +E+ + L +DL+N+R
Sbjct: 319 PELQILRLRAELQSLPGD-LFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNR 377
Query: 683 VQQCPD 700
+ PD
Sbjct: 378 LTHLPD 383
>AE014297-3997|AAF56624.1| 1097|Drosophila melanogaster CG5490-PA,
isoform A protein.
Length = 1097
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Frame = +2
Query: 512 PVHRSIRSHDDFKSLPSHPAFFISYRAARVSM-ENIQKSLKK--MENDIKALEMDLNNSR 682
P + +R + +SLP F S + +S+ +N+ K+L +E+ + L +DL+N+R
Sbjct: 319 PELQILRLRAELQSLPGD-LFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNR 377
Query: 683 VQQCPD 700
+ PD
Sbjct: 378 LTHLPD 383
>BT024393-1|ABC86455.1| 353|Drosophila melanogaster IP05211p
protein.
Length = 353
Score = 28.7 bits (61), Expect = 8.1
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Frame = +1
Query: 256 SV*LQWLHRPSNRNALLLHG--RNRRGTGTYPRGLTRGPTTTNYENYNFAGLIFTTRCYS 429
SV L W H RNA + H R G L R T TN +Y GL T YS
Sbjct: 68 SVNLSWAHSQHPRNAPVTHFIIETREGEDGIWEQLARIYTKTNATSYQVTGLTPFT-VYS 126
Query: 430 F-AVEVNREHLLSTYFIRKIGTRLRDSNTGASLNTKPRRLQITTL 561
F + VN+ + LR++ TG + T T++
Sbjct: 127 FRLLAVNKLGISPPSKESYYIVTLREAPTGKPIPTTAHNTSSTSV 171
>AE014297-4373|AAF56889.2| 1433|Drosophila melanogaster CG2005-PE,
isoform E protein.
Length = 1433
Score = 28.7 bits (61), Expect = 8.1
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Frame = +1
Query: 256 SV*LQWLHRPSNRNALLLHG--RNRRGTGTYPRGLTRGPTTTNYENYNFAGLIFTTRCYS 429
SV L W H RNA + H R G L R T TN +Y GL T YS
Sbjct: 191 SVNLSWAHSQHPRNAPVTHFIIETREGEDGIWEQLARIYTKTNATSYQVTGLTPFT-VYS 249
Query: 430 F-AVEVNREHLLSTYFIRKIGTRLRDSNTGASLNTKPRRLQITTL 561
F + VN+ + LR++ TG + T T++
Sbjct: 250 FRLLAVNKLGISPPSKESYYIVTLREAPTGKPIPTTAHNTSSTSV 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,034,102
Number of Sequences: 53049
Number of extensions: 636608
Number of successful extensions: 1900
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1900
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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