Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0920
         (705 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81589-7|CAB61028.1|   63|Caenorhabditis elegans Hypothetical pr...    28   7.5  
X53245-1|CAA37335.1|   63|Caenorhabditis elegans metallothionein...    28   7.5  
U58743-2|AAB00614.1|  298|Caenorhabditis elegans Hypothetical pr...    28   7.5  
M92910-1|AAA28111.1|   63|Caenorhabditis elegans metallothionein...    28   7.5  
M32387-1|AAA28118.1|   63|Caenorhabditis elegans protein ( C.ele...    28   7.5  
M32386-1|AAA28117.1|   63|Caenorhabditis elegans protein ( C.ele...    28   7.5  
D17365-1|BAA04181.1|   63|Caenorhabditis elegans metallothionein...    28   7.5  
Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z81589-7|CAB61028.1|   63|Caenorhabditis elegans Hypothetical
          protein T08G5.10 protein.
          Length = 63

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +3

Query: 24 CRTLIGECDF----CCFSFCLPSASDKK 95
          C T   +CD     CC  +C P+AS+KK
Sbjct: 14 CNTGTKDCDCSDAKCCEQYCCPTASEKK 41


>X53245-1|CAA37335.1|   63|Caenorhabditis elegans
          metallothionein-II protein.
          Length = 63

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +3

Query: 24 CRTLIGECDF----CCFSFCLPSASDKK 95
          C T   +CD     CC  +C P+AS+KK
Sbjct: 14 CNTGTKDCDCSDAKCCEQYCCPTASEKK 41


>U58743-2|AAB00614.1|  298|Caenorhabditis elegans Hypothetical
           protein F39F10.2 protein.
          Length = 298

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +3

Query: 474 H*KNRYPPAGFEHRCI-AQYEATTTSNHYPH 563
           H +NR PPA F++RC+   +    T+  +PH
Sbjct: 164 HNQNRTPPAPFDNRCMHLIHTPAKTATGHPH 194


>M92910-1|AAA28111.1|   63|Caenorhabditis elegans
          metallothionein-2 protein.
          Length = 63

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +3

Query: 24 CRTLIGECDF----CCFSFCLPSASDKK 95
          C T   +CD     CC  +C P+AS+KK
Sbjct: 14 CNTGTKDCDCSDAKCCEQYCCPTASEKK 41


>M32387-1|AAA28118.1|   63|Caenorhabditis elegans protein (
          C.elegans metallothionein-like protein (MT-Ce) mRNA,
          clone MTCe-2, complete cds.).
          Length = 63

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +3

Query: 24 CRTLIGECDF----CCFSFCLPSASDKK 95
          C T   +CD     CC  +C P+AS+KK
Sbjct: 14 CNTGTKDCDCSDAKCCEQYCCPTASEKK 41


>M32386-1|AAA28117.1|   63|Caenorhabditis elegans protein (
          C.elegans metallothionein-like protein (MT-Ce) mRNA,
          clone MTCe-1, complete cds.).
          Length = 63

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +3

Query: 24 CRTLIGECDF----CCFSFCLPSASDKK 95
          C T   +CD     CC  +C P+AS+KK
Sbjct: 14 CNTGTKDCDCSDAKCCEQYCCPTASEKK 41


>D17365-1|BAA04181.1|   63|Caenorhabditis elegans
          metallothionein-II protein.
          Length = 63

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = +3

Query: 24 CRTLIGECDF----CCFSFCLPSASDKK 95
          C T   +CD     CC  +C P+AS+KK
Sbjct: 14 CNTGTKDCDCSDAKCCEQYCCPTASEKK 41


>Z92796-5|CAB07233.1|  518|Caenorhabditis elegans Hypothetical
           protein H25K10.6 protein.
          Length = 518

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
 Frame = +1

Query: 373 TNYENYNF-AGLIFTTRCYSFAVEVNREHLLSTYFIRKIGTRLRDSNTGASLNTKPRRLQ 549
           T++EN +F  GL   T  +S+  ++   ++     +++ G  +        L   PR + 
Sbjct: 263 TDFENLSFLTGLETITSKHSYLSKMTMLNIHDNPKMKRFG--MYSLKRLEDLLGNPRTIN 320

Query: 550 ITTLTPCF-------FYFLQGSKSFDGEHSEVPQED 636
           I  L P F        YFL+   SF   H+E  +ED
Sbjct: 321 IENLHPDFCLTFGEVIYFLENDISFQNLHAEFCEED 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,772,470
Number of Sequences: 27780
Number of extensions: 325382
Number of successful extensions: 933
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 933
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)