Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0920
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.8  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   3.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   4.9  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   4.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   4.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.6  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   8.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   8.6  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 493 RLRDSNTGASLNTKPRRLQITTLTPCFFYFLQGSK 597
           R+    TG     +P  + +  +  CF  FL+GS+
Sbjct: 164 RVDPFRTGFEHKRQPTSIDLNAVRLCFQVFLEGSQ 198


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 493 RLRDSNTGASLNTKPRRLQITTLTPCFFYFLQGSK 597
           R+    TG     +P  + +  +  CF  FL+GS+
Sbjct: 164 RVDPFRTGFEHKRQPTSIDLNAVRLCFQVFLEGSQ 198


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 286 SNRNALLLHGRNRRGTGTYPRGLT 357
           +  NA+LL GR+++ T   P G T
Sbjct: 366 TKENAMLLSGRSQKSTTGPPPGPT 389


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 51  FCCFSFCLPSASDKKKTI 104
           FCC  +C+    +  KTI
Sbjct: 457 FCCKGYCMDLLKELSKTI 474


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 570 AGCEGSDLKSSWLR 529
           A C GS +K+ WLR
Sbjct: 579 ATCLGSSIKAMWLR 592


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 9   ISPRRCRTLIGECDFCCFSFCLP 77
           +SPRR R L+       F  C P
Sbjct: 177 MSPRRARLLVATVWILSFVICFP 199


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 155 RYELKKSDVVTGAHRHL 205
           R+E++ +DV+ G   H+
Sbjct: 525 RHEIRSTDVIPGTQEHV 541


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 508 NTGASLNTKPRRLQIT 555
           +TG+ +NT+  R+Q+T
Sbjct: 322 HTGSVINTRGERIQLT 337


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 552 HYPHTLLFLFLTGQ 593
           HY H LLF F  G+
Sbjct: 7   HYRHILLFYFRKGK 20


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 592 SKSFDGEHSEVPQEDGERHKS 654
           SKS +G+ S+ P +    H+S
Sbjct: 799 SKSVNGDQSQPPHQQLHHHQS 819


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,360
Number of Sequences: 438
Number of extensions: 4231
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)