Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0919
         (447 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6GWY9 Cluster: Probable metalloprotease; n=1; Flavobac...    33   2.8  
UniRef50_Q113K6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_A4MHZ9 Cluster: Methyltransferase type 12; n=2; Geobact...    33   3.7  

>UniRef50_A6GWY9 Cluster: Probable metalloprotease; n=1;
           Flavobacterium psychrophilum JIP02/86|Rep: Probable
           metalloprotease - Flavobacterium psychrophilum (strain
           JIP02/86 / ATCC 49511)
          Length = 296

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 24/67 (35%), Positives = 31/67 (46%)
 Frame = -3

Query: 211 LPGSLATSGARLPVGYRTLFRTFYKWYSGGSTFSEVFDAKTLYSDILFISYRTHKMYFYF 32
           LP S +T+GA L     +   +F  W     +F  V D  T  S    ISY T K+YF  
Sbjct: 64  LPNSGSTTGASLMTTQNSTIASF--WGRSAPSFRFVRDLTTPSSTFNAISYSTGKIYFGE 121

Query: 31  SNFTIAY 11
           + F  AY
Sbjct: 122 AIFKWAY 128


>UniRef50_Q113K6 Cluster: Putative uncharacterized protein; n=1;
           Trichodesmium erythraeum IMS101|Rep: Putative
           uncharacterized protein - Trichodesmium erythraeum
           (strain IMS101)
          Length = 636

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +1

Query: 226 SGSSKLYLIIVLTTSGLENVVLATPACRHKKSG 324
           SG S  Y+I  L  SG +N+VL   ACR+K  G
Sbjct: 115 SGISVDYIIQQLQKSGADNIVLILDACRNKSDG 147


>UniRef50_A4MHZ9 Cluster: Methyltransferase type 12; n=2;
           Geobacter|Rep: Methyltransferase type 12 - Geobacter
           bemidjiensis Bem
          Length = 359

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -3

Query: 220 PLALPGSLATSGARLPVGYRTLFRTFYKWYSGGSTFSEVFDAKTLYSDILFI 65
           PL +PG L  +   +P G R+  R F K  +  +  SE       Y+D LF+
Sbjct: 303 PLLIPGRLGEANPPIPRGERSFLRRFKKPVAATALLSEDLTRAKQYADKLFL 354


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 453,922,347
Number of Sequences: 1657284
Number of extensions: 8943085
Number of successful extensions: 24124
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24122
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)