Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0918
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000EBD871 Cluster: PREDICTED: hypothetical protein;...    35   2.2  
UniRef50_P72408 Cluster: BldKC; n=5; Streptomyces|Rep: BldKC - S...    33   5.1  
UniRef50_A5BQ72 Cluster: Putative uncharacterized protein; n=1; ...    33   5.1  
UniRef50_Q6CGY7 Cluster: Similar to CA4834|IPF1217 Candida albic...    33   5.1  
UniRef50_Q59T43 Cluster: Putative uncharacterized protein BAS1; ...    33   5.1  
UniRef50_A0HL23 Cluster: Putative uncharacterized protein; n=2; ...    33   6.7  
UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma j...    33   6.7  
UniRef50_O82496 Cluster: T12H20.15 protein; n=6; Arabidopsis tha...    33   8.8  
UniRef50_A2FJ53 Cluster: Putative uncharacterized protein; n=1; ...    33   8.8  

>UniRef50_UPI0000EBD871 Cluster: PREDICTED: hypothetical protein;
           n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
           Bos taurus
          Length = 191

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 22/71 (30%), Positives = 34/71 (47%)
 Frame = -3

Query: 528 PPLVGPYFFETGSPSPLRYESGLMLAASSEEFEDKSDDRSSIFTVSWLPSSR*KDSLLPR 349
           PP +GPY   +G P+P R+ + L L  SS     ++            P++R  DS  P 
Sbjct: 110 PPRLGPYLSVSGPPAPARHCAALPLRGSSMALAGRTQACPD-------PTNRASDSPAPG 162

Query: 348 RDPMHTARRRR 316
           +    ++RRRR
Sbjct: 163 QPSAESSRRRR 173


>UniRef50_P72408 Cluster: BldKC; n=5; Streptomyces|Rep: BldKC -
           Streptomyces coelicolor
          Length = 323

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = -2

Query: 685 VLYFLLKFRKPFSDIKLVLLPMCFAFFVFYLLSKDRLLLLGYPC 554
           +L FL+  R+ F  + +++L   F FF+F+ + +DR+L  G  C
Sbjct: 1   MLQFLI--RRSFGAVLILVLISAFTFFMFFAIPQDRMLACGKNC 42


>UniRef50_A5BQ72 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 596

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 24/97 (24%), Positives = 44/97 (45%)
 Frame = -3

Query: 564 AIPVRVPIFLLFPPLVGPYFFETGSPSPLRYESGLMLAASSEEFEDKSDDRSSIFTVSWL 385
           ++P+R P+ L+FP L+G  F   GS S  R+        +S      S   +S  T S  
Sbjct: 107 SLPLRFPLSLIFPCLLGILFAIEGSVSAPRFNMPTKKDVASSSAVGFSGKNASGKTYSEK 166

Query: 384 PSSR*KDSLLPRRDPMHTARRRRPDNIEQNPHVPNLR 274
           P+ +  +        ++T ++ + D      H+P+L+
Sbjct: 167 PTDKLNERQFCEVLFVYTIKKGKTDLFTLFAHIPSLQ 203


>UniRef50_Q6CGY7 Cluster: Similar to CA4834|IPF1217 Candida albicans
           unknown function; n=1; Yarrowia lipolytica|Rep: Similar
           to CA4834|IPF1217 Candida albicans unknown function -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 1080

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -2

Query: 676 FLLKFRKPFSDIKLVLLPMCFAFFVFYLLSKDRLLLLGYPCQSADLSAL 530
           F  +F      I   +L  CFAFF+ ++ +K R+++ GY C    +S L
Sbjct: 189 FDAQFMTAKGSIVYAVLMGCFAFFLLWVKNKSRIIIPGYVCGIIAMSVL 237


>UniRef50_Q59T43 Cluster: Putative uncharacterized protein BAS1;
           n=1; Candida albicans|Rep: Putative uncharacterized
           protein BAS1 - Candida albicans (Yeast)
          Length = 607

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +1

Query: 595 NKKRKTQSTSEEEPILCPKTAFEISEGSTVHQS 693
           +K+R++Q++S   P+L P T F +S  ++VH S
Sbjct: 499 HKRRESQNSSFNSPMLTPSTRFSVSSMTSVHNS 531


>UniRef50_A0HL23 Cluster: Putative uncharacterized protein; n=2;
           Comamonadaceae|Rep: Putative uncharacterized protein -
           Comamonas testosteroni KF-1
          Length = 664

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = -2

Query: 664 FRKPF--SDIKLVLLPMCFAFFVFYLLSKDRLLLLGYPCQSADLSALSP 524
           F  PF  S +++VL+ + F F    LLS  R  L G+ C    L ALSP
Sbjct: 428 FAWPFANSQLQMVLMMLPFIFLGALLLSHRRTTLYGFDCNMVILLALSP 476


>UniRef50_Q5BZE9 Cluster: SJCHGC08917 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC08917 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 256

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
 Frame = -3

Query: 363 SLLPRRDPMHTARRRRPDNIEQNPHVPNLRDPCICADTRDIL---IKTKNSEIYLSVGLN 193
           S+LP  DP+   R R  D++   P V  L DP +  D  DI    IK  + EI LS+   
Sbjct: 108 SVLPSCDPIPEKRARIEDSLSCAPSVVTLTDPVVNND-NDIYEEGIKNNSEEIVLSIPYE 166

Query: 192 R 190
           R
Sbjct: 167 R 167


>UniRef50_O82496 Cluster: T12H20.15 protein; n=6; Arabidopsis
           thaliana|Rep: T12H20.15 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 705

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +3

Query: 408 KNDRPIYLRILQTTLPTSARTRTAMEKVSPFRKSMAQREGERAERSAL 551
           KN   IYL+ +      S  +   +++V   R+ +  RE ERAER++L
Sbjct: 290 KNKDAIYLKEVSFRTKDSRHSSDVVQQVKSLRRKVMARESERAERTSL 337


>UniRef50_A2FJ53 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1051

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = -3

Query: 549 VPIFLLFPPLVGPYFFETGSPSPLRYESGLM-----LAASSEEFEDKSDDRSSIFTVSWL 385
           +PIF  F P+ G  FF  G   PL     +M     L  SS E ED  ++R  + T   +
Sbjct: 41  IPIFASFSPVAGA-FFALGLSLPLLITKSIMYYLNSLVNSSFELEDSGENRDEVVTREEI 99

Query: 384 P 382
           P
Sbjct: 100 P 100


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,685,084
Number of Sequences: 1657284
Number of extensions: 14790494
Number of successful extensions: 40716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40691
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)